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Lag0004294 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004294
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncalmodulin-like
Genome locationchr6:2693939..2694299
RNA-Seq ExpressionLag0004294
SyntenyLag0004294
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060893.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]3.0e-2267.44Show/hide
Query:  MTRK-YD-KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC
        MTR  YD K S  K+Q+E++K IFREHD +GDG LS++ELSRAFG  GAF PLYRA  G  +AD D DGFI+EQEL+KVVDYAIKC
Subjt:  MTRK-YD-KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC

KAG6585659.1 hypothetical protein SDJN03_18392, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2676.47Show/hide
Query:  MTRKY-DKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC
        M  KY  KNSS  + RE+IKAIF+EHD +GDG LS+QELSRAFGMLGAFLPLYRAVRG LIAD + DG+ITE ELDKVVDYAIKC
Subjt:  MTRKY-DKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC

KAG6585660.1 Calmodulin-like protein 5, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2475.64Show/hide
Query:  KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC
        K S+ +++RE+IKAIFREHD++GDG LS+QELSRAFGM GAFLPLYRA R    ADA+ DGFITEQELDKVVDYAIKC
Subjt:  KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC

KGN62515.1 hypothetical protein Csa_022644 [Cucumis sativus]1.4e-2267.44Show/hide
Query:  MTRK-YD-KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC
        MTR+ YD K S  K+Q+E++K +FREHD +GDG LS++ELSRAFG  GAF PLYRA  G  +AD D DGFI+EQELDKVVDYAIKC
Subjt:  MTRK-YD-KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC

XP_022144349.1 calmodulin-like protein 5 [Momordica charantia]1.8e-2267.06Show/hide
Query:  MTRK-YDKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC
        MT K   K  S+K+ RE++KAIFR HD++GDG LS++ELSRAFG LGA LPLYRAV G L ADAD DG IT++EL+KVVDYA+KC
Subjt:  MTRK-YDKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC

TrEMBL top hitse value%identityAlignment
A0A0A0LKW4 Uncharacterized protein6.6e-2367.44Show/hide
Query:  MTRK-YD-KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC
        MTR+ YD K S  K+Q+E++K +FREHD +GDG LS++ELSRAFG  GAF PLYRA  G  +AD D DGFI+EQELDKVVDYAIKC
Subjt:  MTRK-YD-KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC

A0A5A7UY46 Putative calcium-binding protein CML101.5e-2267.44Show/hide
Query:  MTRK-YD-KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC
        MTR  YD K S  K+Q+E++K IFREHD +GDG LS++ELSRAFG  GAF PLYRA  G  +AD D DGFI+EQEL+KVVDYAIKC
Subjt:  MTRK-YD-KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC

A0A6J1CS20 calmodulin-like protein 58.6e-2367.06Show/hide
Query:  MTRK-YDKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC
        MT K   K  S+K+ RE++KAIFR HD++GDG LS++ELSRAFG LGA LPLYRAV G L ADAD DG IT++EL+KVVDYA+KC
Subjt:  MTRK-YDKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKC

A0A6J1CSH1 probable calcium-binding protein CML153.2e-1756.63Show/hide
Query:  KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCDVRET
        K   +K  R  IK IF EHD+DGDGCLSV EL +AF  LG+ +PLY+A  G   AD D DG I+E+ELDK+VDYA K   R+T
Subjt:  KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCDVRET

A0A6J1KUW2 calmodulin-like1.6e-1656.58Show/hide
Query:  DKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYA
        +K +S+K+ R  IK IF EHD+DGDG LSV EL++AF   G+ +PLY+A  G   ADAD DG I+E+EL+K+VDYA
Subjt:  DKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYA

SwissProt top hitse value%identityAlignment
Q9NZT1 Calmodulin-like protein 53.9e-0438.1Show/hide
Query:  EDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV
        ED++  FR  D DGDG ++V EL RA   LG  LP          AD D+DG +  +E  +++
Subjt:  EDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV

Arabidopsis top hitse value%identityAlignment
AT3G50770.1 calmodulin-like 416.8e-0432.31Show/hide
Query:  DKNSSLK---IQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDG
        D N+++K     +E+++ +F   D DGDG +S  EL   FG +G ++    A       D D DG
Subjt:  DKNSSLK---IQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDG

AT3G51920.1 calmodulin 96.8e-0430.56Show/hide
Query:  KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV
        +N+S +   +++  +FR  D DGDG +S  EL      +G  +    A      AD D DGF++  E  K++
Subjt:  KNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGTAAATATGATAAGAACTCAAGTTTGAAGATACAAAGAGAGGACATAAAAGCAATCTTCAGGGAGCATGACCTAGATGGCGATGGGTGCCTGAGTGTCCAAGA
ATTATCTCGAGCATTCGGGATGCTCGGCGCGTTTCTCCCTCTCTACCGTGCAGTCCGTGGCTTCCTCATTGCCGATGCCGATCGAGATGGATTTATTACCGAGCAAGAAC
TGGACAAGGTGGTGGATTATGCTATAAAATGTGATGTACGAGAAACCCTTCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCGTAAATATGATAAGAACTCAAGTTTGAAGATACAAAGAGAGGACATAAAAGCAATCTTCAGGGAGCATGACCTAGATGGCGATGGGTGCCTGAGTGTCCAAGA
ATTATCTCGAGCATTCGGGATGCTCGGCGCGTTTCTCCCTCTCTACCGTGCAGTCCGTGGCTTCCTCATTGCCGATGCCGATCGAGATGGATTTATTACCGAGCAAGAAC
TGGACAAGGTGGTGGATTATGCTATAAAATGTGATGTACGAGAAACCCTTCCCTAG
Protein sequenceShow/hide protein sequence
MTRKYDKNSSLKIQREDIKAIFREHDLDGDGCLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCDVRETLP