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Lag0004298 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004298
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncalmodulin-like
Genome locationchr6:2755923..2756408
RNA-Seq ExpressionLag0004298
SyntenyLag0004298
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951879.1 calmodulin-like [Cucurbita moschata]2.0e-3757.5Show/hide
Query:  HSHHPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQH---HRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDG
        H  H H  +      EA ++++ YDKN D+ L+K EL+  I    +++   H    K + V  K  K  AKA EEKG+ M+LSRSQIKEIF EHDIDGDG
Subjt:  HSHHPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQH---HRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDG

Query:  CLNMSEMTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF
         L++SE+TKAFSF GS IP +KAHYGL+YAD DGDGLI EEELEKLVDYAER +KKK GF
Subjt:  CLNMSEMTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF

XP_022951880.1 calmodulin-like [Cucurbita moschata]3.8e-4465.13Show/hide
Query:  HPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSE
        H HH +    + +AN +I+KYDKNGD++LTK+ELT +I+EQ+SQ  +GP KD +VC KP K  AK  E+KG  MRLSRS+I++IF EHDIDGDG LN+SE
Subjt:  HPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSE

Query:  MTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG
        +TKAFSF GS +P +KAHYGL+YAD DGDG I EEELEKLVDYAERVS++KG
Subjt:  MTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG

XP_023002888.1 calmodulin-like [Cucurbita maxima]1.4e-3859.35Show/hide
Query:  HHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQH---HRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMS
        H  Q    + EA + I+ YDKN D+ L+K EL+  I    +++   H+   K + V  K  K  AKA EEKG+ M+LSRSQIKEIF EHDIDGDG L++S
Subjt:  HHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQH---HRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMS

Query:  EMTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF
        E+TKAFSF GS IP +KAHYGL+YAD DGDGLI EEELEKLVDYAER +KKK GF
Subjt:  EMTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF

XP_023002889.1 calmodulin-A-like [Cucurbita maxima]7.2e-4363.82Show/hide
Query:  HPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSE
        H HH Q    + +AN +I+KYDKNGD++LTK+ELT +I+EQ+SQ     H  +VVC KP K  AK  E+KG  MRLSRS+I++IF EHDIDGDG LN+SE
Subjt:  HPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSE

Query:  MTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG
        +TKAFSF GS +P +KAHYGL+YAD DGDG I EEEL KLVDYAERVS++KG
Subjt:  MTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG

XP_023537874.1 probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]2.1e-4267.86Show/hide
Query:  EANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSEMTKAFSFCGSAI
        +AN +I+KYDKNGD++LTK+ELT +I+EQ+SQ  +GP KD +VC KP K  AK  E+KG  MRLSRS+I++IF EHDIDGDG LN+SE+TKAFSF GS +
Subjt:  EANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSEMTKAFSFCGSAI

Query:  PFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG
        P +KAHYGL+YAD DGDG I EEEL KLVDYAERVS++KG
Subjt:  PFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG

TrEMBL top hitse value%identityAlignment
A0A6J1CSH1 probable calcium-binding protein CML151.3e-3456.67Show/hide
Query:  HHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAK-AKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSEM
        H GQ    + EA++MI+KYDKNGD+++TK E+    +          HK  VV  K  K  A+ A E+K  K++ SRSQIKEIF EHDIDGDGCL++SE+
Subjt:  HHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAK-AKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSEM

Query:  TKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKK
         KAFSF GS IP +KAHYGL++AD+DGDGLI EEEL+KLVDYAE+ S +K
Subjt:  TKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKK

A0A6J1GK16 calmodulin-like9.9e-3857.5Show/hide
Query:  HSHHPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQH---HRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDG
        H  H H  +      EA ++++ YDKN D+ L+K EL+  I    +++   H    K + V  K  K  AKA EEKG+ M+LSRSQIKEIF EHDIDGDG
Subjt:  HSHHPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQH---HRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDG

Query:  CLNMSEMTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF
         L++SE+TKAFSF GS IP +KAHYGL+YAD DGDGLI EEELEKLVDYAER +KKK GF
Subjt:  CLNMSEMTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF

A0A6J1GK54 calmodulin-like1.9e-4465.13Show/hide
Query:  HPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSE
        H HH +    + +AN +I+KYDKNGD++LTK+ELT +I+EQ+SQ  +GP KD +VC KP K  AK  E+KG  MRLSRS+I++IF EHDIDGDG LN+SE
Subjt:  HPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSE

Query:  MTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG
        +TKAFSF GS +P +KAHYGL+YAD DGDG I EEELEKLVDYAERVS++KG
Subjt:  MTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG

A0A6J1KRR4 calmodulin-A-like3.5e-4363.82Show/hide
Query:  HPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSE
        H HH Q    + +AN +I+KYDKNGD++LTK+ELT +I+EQ+SQ     H  +VVC KP K  AK  E+KG  MRLSRS+I++IF EHDIDGDG LN+SE
Subjt:  HPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSE

Query:  MTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG
        +TKAFSF GS +P +KAHYGL+YAD DGDG I EEEL KLVDYAERVS++KG
Subjt:  MTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKG

A0A6J1KUW2 calmodulin-like6.8e-3959.35Show/hide
Query:  HHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQH---HRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMS
        H  Q    + EA + I+ YDKN D+ L+K EL+  I    +++   H+   K + V  K  K  AKA EEKG+ M+LSRSQIKEIF EHDIDGDG L++S
Subjt:  HHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQH---HRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMS

Query:  EMTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF
        E+TKAFSF GS IP +KAHYGL+YAD DGDGLI EEELEKLVDYAER +KKK GF
Subjt:  EMTKAFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCTGCCCATTCTCATCATCCTCACCATGGCCAAGGCCAAGCTTACAAAGACGAAGCAAATCAGATGATCGAGAAATACGACAAAAATGGCGATGCAGTCCTCAC
CAAGAACGAGCTAACCACTTTGATCATGGAACAATCATCTCAACACCACCGAGGACCTCATAAGGACGAGGTCGTCTGCAATAAACCTCATAAAGCTAAGGCTAAGGCTA
AGGAAGAGAAGGGTTCAAAGATGAGGCTGAGTCGCAGCCAGATCAAGGAGATCTTCGAAGAGCACGATATCGACGGCGATGGTTGTCTCAACATGAGTGAGATGACAAAG
GCCTTCAGCTTCTGTGGTTCAGCGATTCCGTTCCACAAAGCTCACTATGGTCTATCTTATGCGGATGAGGATGGAGATGGTCTTATCGACGAGGAAGAGCTTGAAAAACT
CGTTGATTATGCTGAGAGAGTGAGCAAAAAGAAGGGAGGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCTGCCCATTCTCATCATCCTCACCATGGCCAAGGCCAAGCTTACAAAGACGAAGCAAATCAGATGATCGAGAAATACGACAAAAATGGCGATGCAGTCCTCAC
CAAGAACGAGCTAACCACTTTGATCATGGAACAATCATCTCAACACCACCGAGGACCTCATAAGGACGAGGTCGTCTGCAATAAACCTCATAAAGCTAAGGCTAAGGCTA
AGGAAGAGAAGGGTTCAAAGATGAGGCTGAGTCGCAGCCAGATCAAGGAGATCTTCGAAGAGCACGATATCGACGGCGATGGTTGTCTCAACATGAGTGAGATGACAAAG
GCCTTCAGCTTCTGTGGTTCAGCGATTCCGTTCCACAAAGCTCACTATGGTCTATCTTATGCGGATGAGGATGGAGATGGTCTTATCGACGAGGAAGAGCTTGAAAAACT
CGTTGATTATGCTGAGAGAGTGAGCAAAAAGAAGGGAGGTTTTTAA
Protein sequenceShow/hide protein sequence
MSAAHSHHPHHGQGQAYKDEANQMIEKYDKNGDAVLTKNELTTLIMEQSSQHHRGPHKDEVVCNKPHKAKAKAKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSEMTK
AFSFCGSAIPFHKAHYGLSYADEDGDGLIDEEELEKLVDYAERVSKKKGGF