; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004340 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004340
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:3084393..3085591
RNA-Seq ExpressionLag0004340
SyntenyLag0004340
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]4.8e-5036.62Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAED
        +G+ PSFIWRSL WG+ELL +GLRWRVG+G S+ VY   WLP    F++ SP  L   T V DL T+SGQWN  L++  F   EV   L IP+ +    D
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAED

Query:  RIVWHYEKSGLFSVKSGYRLG--QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFW
         ++WHYE++G++SVKSGYRL   +   ++  PS   + +   +WK +W + IPNKIKFFL R   D LP    L  R      +C  C R  ES +H  W
Subjt:  RIVWHYEKSGLFSVKSGYRLG--QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFW

Query:  HCKFFKAVLMESEFGS------------LIHNVQAGS------MFDLLREGL-------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARE
         C+  K V   S +G+            L H +Q  S      +F  L  GL             E    L+         F  A +       ++H R+
Subjt:  HCKFFKAVLMESEFGS------------LIHNVQAGS------MFDLLREGL-------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARE

Query:  DV------RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQR
                 W PP AG YK+NVD + +      G+GVVVR+++G  M  A+ V+R
Subjt:  DV------RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQR

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.8e-7341.46Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMT-ASGQWNEGLIRQHFRPHEVSLILSIPVRAGA-E
        +   PS+IWRS+LWGR+LL++GLRWR+G+G+SV +YG NW+P     ++ S   L   +RV+ L+    G W   ++R  F P E   ILSIP+  GA E
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMT-ASGQWNEGLIRQHFRPHEVSLILSIPVRAGA-E

Query:  DRIVWHYEKSGLFSVKSGYRLG-QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFW
        DR++W+YEK+G++SV+SGY++   +    Q PSSSS+E    WW G WKM IPNKIK FL RLCLDRLPT  NL  RG ++ N C  C R GE S+H+FW
Subjt:  DRIVWHYEKSGLFSVKSGYRLG-QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFW

Query:  HCKFFKAVLMESEFGSLIHNVQAGSMFDLLREGLEPV-----------------------------------VGLVEWAASYISSFQRATSACGVGLQSV
         CKF +A+ + S+FG L       S F +LRE  E +                                   + LVEWA  Y   F+ A S    G   V
Subjt:  HCKFFKAVLMESEFGSLIHNVQAGSMFDLLREGLEPV-----------------------------------VGLVEWAASYISSFQRATSACGVGLQSV

Query:  HAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKG
            ++ W PP+ G YK+N DASF      AGLG+++ +  G+VM +A+    +++S +MAE  AAV+G
Subjt:  HAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKG

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.4e-5434.54Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPV-RAGAED
        +GS+PSF+WRS++WGR++L +G RWR+G+G++V VYG NW+P    F+  S  ++  +T VA+L+    QW E LI QHFRP +   I+ IP+ +   ED
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPV-RAGAED

Query:  RIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC
        +++WHY+K G +SVKSGY++       + PS S+++  +  W+ +WK++IP K+K FL R   D LPT +NL  +      +C  C    E+  H    C
Subjt:  RIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC

Query:  KFFKAVLMESEFGSLIHNVQAGSMFDLLR---------EGLEPV----------------------VGLVEWAASYISSFQRATSACGVGLQSVHAREDV
           + +   S     +  V    +  +L+         EG E                        + +V  A + + SF++      V     +A    
Subjt:  KFFKAVLMESEFGSLIHNVQAGSMFDLLR---------EGLEPV----------------------VGLVEWAASYISSFQRATSACGVGLQSVHAREDV

Query:  RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWA
        +WSPP  GW KVNVDA+   E   AGLGVVVRDS G    +A    R   S  MAE  A
Subjt:  RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWA

XP_024041921.1 uncharacterized protein LOC112099052 [Citrus clementina]9.1e-4933.23Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIP-VRAGAED
        +GS+PSFIWRS+LWGR+++ +G RWRVG+G+S+ ++  NWLP    F+  +   L  +  V +L+     WN+ LI   F   + + I+ IP +R    D
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIP-VRAGAED

Query:  RIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC
         ++WHY K G FSVKSGYR+  S  L   PSSS N +    WK +W +++P KI+ F+ R   + LP+ +NL  R      +C L +   E+  H     
Subjt:  RIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC

Query:  KFFKAVLMESEFGSLIHNVQAGSM--FDLLREGLEPVVGLVEWAASYISSFQRATSACGVGLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGV
        K  K +   + F   +       +  F L          +   A + I ++QR        + +  +     W+PP+ G+ KVNVDA+   E+  +GLG 
Subjt:  KFFKAVLMESEFGSLIHNVQAGSM--FDLLREGLEPVVGLVEWAASYISSFQRATSACGVGLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGV

Query:  VVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGRDW
        V+RD +G V+ +A  V R       AE  A  +  DW
Subjt:  VVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGRDW

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.1e-4931.59Show/hide
Query:  GSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAEDR
        G+  S+IWRS++WGR+++++G+RWR+G+G+ + ++  NWLP    FR   P++L   + VADL+ A  QW+E  +RQHF   + + IL IP+ A  AED 
Subjt:  GSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAEDR

Query:  IVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSS-NESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC
        ++WHY+K G +SVKSGY+L   A  ++ P S+S  E+   +W  +W + +P K+K F+ R   + LP+ +NL  R       C  C+ + E+  H    C
Subjt:  IVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSS-NESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC

Query:  KFFKAVLMESEFGSLIHNVQAGSMF--------DLLREGLEPVVGLVEWAASY------------------------ISSFQRATSACGVGLQSVHARED
        K  + + ++S F +      +  +F        +L +  LE +V L  W+A Y                        +++FQR        +      + 
Subjt:  KFFKAVLMESEFGSLIHNVQAGSMF--------DLLREGLEPVVGLVEWAASY------------------------ISSFQRATSACGVGLQSVHARED

Query:  VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKG
          W PP    +KVNVDA+F  +   AG+G V+RDS+G+++ +         S  +AE  A + G
Subjt:  VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKG

TrEMBL top hitse value%identityAlignment
A0A1S8AC01 Ribonuclease H-like superfamily protein1.5e-4931.2Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPV-RAGAED
        +GS PSFIWRS++WGR+++  G RWR+G G+ V +Y  +W+P    FR  S  TL   + V+ L+    QW+E  I  HF   +   I+S+P+ R   +D
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPV-RAGAED

Query:  RIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC
        +I+WHY+K G +SVKSGY++        LPSSS N +    W+ +W + +P K++ F+ R   + LP+ +NL  R      +C +C+   ES  H   +C
Subjt:  RIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHC

Query:  KFFKAVLMESEFGSLIHNVQAGSMFDLLREGL--------------------------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARED
        K  + V   ++F   +       +  LL+  L                                +P + L + A + + +++R      + +     +  
Subjt:  KFFKAVLMESEFGSLIHNVQAGSMFDLLREGL--------------------------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARED

Query:  VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSA
          WSPP AGW+K+NVDA+  R++  +GLGVV+R++ G V+ +A
Subjt:  VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSA

A0A1S8ACU2 Ribonuclease H-like superfamily protein6.3e-4832.36Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLI--LSIPVRAGAE
        +GS+PSF+WRS++WGR+++  G+RWR+G+G+ V +Y  +W+P    F+  S  TL  +  VA+L+  + +W E LI+QHF   +  LI  + +P+ +   
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLI--LSIPVRAGAE

Query:  DRIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWH
        D+I+WHY+K G +SVKSGY++         PSSSS  S +G W  +W + +P KIK F+ +   + LPT +NL  R      +C  C+   E   H    
Subjt:  DRIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWH

Query:  CKFFKAVLMESEF---GSLIHNVQAGSMFDLL-----REGLEPVVGL-----------------------VEWAASYISSFQRATSACGVGLQSVHARED
        CK  K +   + F     L+ N    SM   L     ++ L  ++ L                       V  A + + S+ R               + 
Subjt:  CKFFKAVLMESEF---GSLIHNVQAGSMFDLL-----REGLEPVVGL-----------------------VEWAASYISSFQRATSACGVGLQSVHARED

Query:  VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSA
         +W PP  G +K NVDA+  +E+ Q GLGVV+RD SG ++++A
Subjt:  VRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSA

A0A5E4FZN9 PREDICTED: retrotransposon2.3e-5036.62Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAED
        +G+ PSFIWRSL WG+ELL +GLRWRVG+G S+ VY   WLP    F++ SP  L   T V DL T+SGQWN  L++  F   EV   L IP+ +    D
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAED

Query:  RIVWHYEKSGLFSVKSGYRLG--QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFW
         ++WHYE++G++SVKSGYRL   +   ++  PS   + +   +WK +W + IPNKIKFFL R   D LP    L  R      +C  C R  ES +H  W
Subjt:  RIVWHYEKSGLFSVKSGYRLG--QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFW

Query:  HCKFFKAVLMESEFGS------------LIHNVQAGS------MFDLLREGL-------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARE
         C+  K V   S +G+            L H +Q  S      +F  L  GL             E    L+         F  A +       ++H R+
Subjt:  HCKFFKAVLMESEFGS------------LIHNVQAGS------MFDLLREGL-------------EPVVGLVEWAASYISSFQRATSACGVGLQSVHARE

Query:  DV------RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQR
                 W PP AG YK+NVD + +      G+GVVVR+++G  M  A+ V+R
Subjt:  DV------RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQR

A0A6J1DAR4 uncharacterized protein LOC1110189548.8e-7441.46Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMT-ASGQWNEGLIRQHFRPHEVSLILSIPVRAGA-E
        +   PS+IWRS+LWGR+LL++GLRWR+G+G+SV +YG NW+P     ++ S   L   +RV+ L+    G W   ++R  F P E   ILSIP+  GA E
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMT-ASGQWNEGLIRQHFRPHEVSLILSIPVRAGA-E

Query:  DRIVWHYEKSGLFSVKSGYRLG-QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFW
        DR++W+YEK+G++SV+SGY++   +    Q PSSSS+E    WW G WKM IPNKIK FL RLCLDRLPT  NL  RG ++ N C  C R GE S+H+FW
Subjt:  DRIVWHYEKSGLFSVKSGYRLG-QSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFW

Query:  HCKFFKAVLMESEFGSLIHNVQAGSMFDLLREGLEPV-----------------------------------VGLVEWAASYISSFQRATSACGVGLQSV
         CKF +A+ + S+FG L       S F +LRE  E +                                   + LVEWA  Y   F+ A S    G   V
Subjt:  HCKFFKAVLMESEFGSLIHNVQAGSMFDLLREGLEPV-----------------------------------VGLVEWAASYISSFQRATSACGVGLQSV

Query:  HAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKG
            ++ W PP+ G YK+N DASF      AGLG+++ +  G+VM +A+    +++S +MAE  AAV+G
Subjt:  HAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKG

A0A803QQT2 Uncharacterized protein2.0e-4935.26Show/hide
Query:  GSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAEDR
        G+  SF+WRSL+WG++L+ +G RWRVG+GESV V    WLP    F+V    +L     V DL  A GQW+EG IR  F P +V LIL IP      ED+
Subjt:  GSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRA-GAEDR

Query:  IVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLC-RRAGESSMHVFWHC
        I+WHY K G +SVKSGYR+  S    Q    S+  S + WWK +W++ IP K+K F+ ++  + LP   NL  RG     VC  C     ES  H  W C
Subjt:  IVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLC-RRAGESSMHVFWHC

Query:  KFFKAVLMESEFGSLIHNVQAGSMFDLL--------REGLE--------------PVV---------GLVEWAASYISSFQRATSACGVGLQSVHAREDV
        K  K     S     +  +       +L        +E LE               VV          ++EW  ++++ F+  T       +S  + ED 
Subjt:  KFFKAVLMESEFGSLIHNVQAGSMFDLL--------REGLE--------------PVV---------GLVEWAASYISSFQRATSACGVGLQSVHAREDV

Query:  RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKG
        RW PP      +NVDA  ++    +GLG VVRD++G V+ +A+ V +    P   E  A  KG
Subjt:  RWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKG

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.1e-1522.96Show/hide
Query:  SFIWRSLLWG-RELLERGLRWRVGSGESVPVYGVNW------LPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPH---EVSLILSIPVRA
        S  WRS+  G R+++  G+ W  G G+ +  +   W      L  D   R     T+  +    DL      W+   I  +   +   E+  ++ + +  
Subjt:  SFIWRSLLWG-RELLERGLRWRVGSGESVPVYGVNW------LPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPH---EVSLILSIPVRA

Query:  GAEDRIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHV
        GA DR+ W + + G FSV+S Y +     + ++P  +       ++  +WK+ +P ++K FL  +    + T +    R     NVC +C+   ES +HV
Subjt:  GAEDRIVWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHV

Query:  FWHCK-----------------FFKAVLMESEFGSL-------------IHNV--------QAGSMFDLLREGLEPVVGLVEWAASYISSFQRATSACGV
           C                  FF   L E  + +L             I  V        + G++F    +  + V  + EWA   +  ++  +    V
Subjt:  FWHCK-----------------FFKAVLMESEFGSL-------------IHNV--------QAGSMFDLLREGLEPVVGLVEWAASYISSFQRATSACGV

Query:  GLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGRDWQW
        G+        + W  P  GW KVN D + R     A  G V+RD +G      SL      +P+ AE W    G  + W
Subjt:  GLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGRDWQW

P93295 Uncharacterized mitochondrial protein AtMg003105.4e-0443.18Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPED
        +G+RPS+ WRS++ GRELL RGL   +G G    V+   W+ ++
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPED

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.5e-0436.36Show/hide
Query:  WWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKFFKAV
        W+K VW  +   K  F    +  +RL T D L   G  +  VC+LC    ES  H+F+ C F  AV
Subjt:  WWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKFFKAV

AT2G02650.1 Ribonuclease H-like superfamily protein2.3e-0519.82Show/hide
Query:  KGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMF---DLLREGLEPVVGLV
        + +WK+ +  KIK FL R     L T   L  R  D   +C  C    E+  H+ ++C + ++V   +       N+  G+ +       + L  ++ L 
Subjt:  KGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMF---DLLREGLEPVVGLV

Query:  E-------------------WAASYISSFQRATSA----CGVGLQ---------------SVHA---------REDVRWSPPEAGWYKVNVDASFRRERW
        +                   W +  +  FQ+   +       G+Q               +VH          R+  +W+PP  GW K N D+ + +   
Subjt:  E-------------------WAASYISSFQRATSA----CGVGLQ---------------SVHA---------REDVRWSPPEAGWYKVNVDASFRRERW

Query:  QAGLGVVVRDSSGRVML
            G  +R+ +G ++L
Subjt:  QAGLGVVVRDSSGRVML

AT3G09510.1 Ribonuclease H-like superfamily protein2.1e-1924Show/hide
Query:  SFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQ---WNEGLIRQHFRPHEVSLILSIPV-RAGAEDRI
        S+ W SLL G  LL++G R  +G G+++ + G++ + +    R  +      E  + +L    G    W++  I Q     +   I  I + ++   D+I
Subjt:  SFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQ---WNEGLIRQHFRPHEVSLILSIPV-RAGAEDRI

Query:  VWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKF
        +W+Y  +G ++V+SGY L        +P+ +     +     +W + I  K+K FL R     L T + L  RG  +   C  C R  ES  H  + C F
Subjt:  VWHYEKSGLFSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKF

Query:  ------------FKAVLMESEFGSLIHN----VQAGSMFDLLREGLEPVVGLVE-WAAS---YISSFQRATSACGVGLQS-VH-----------------
                     +  LM ++F   I N    VQ  +M D  +  L PV  +   W A      + F+ + S   +  ++  H                 
Subjt:  ------------FKAVLMESEFGSLIHN----VQAGSMFDLLREGLEPVVGLVE-WAAS---YISSFQRATSACGVGLQS-VH-----------------

Query:  --AREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGRDWQW
          A   + W  P A + K N DA F  ++ +A  G ++R+  G  +   S+   H  +P  AE  A +      W
Subjt:  --AREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVKGRDWQW

AT4G29090.1 Ribonuclease H-like superfamily protein4.4e-2526.28Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWL---PEDGNFRV-RSP----VTLAPETRVADLMTASG-QWNEGLIRQHFRPHEVSLILSI
        +GSRPSF+W+S+   +E+L +G R  VG+GE + ++   WL   P     R+ R P     +++   +V+DL+  SG +W + +I   F   E  LI  +
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWL---PEDGNFRV-RSP----VTLAPETRVADLMTASG-QWNEGLIRQHFRPHEVSLILSI

Query:  -PVRAGAEDRIVWHYEKSGLFSVKSGY-RLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAG
         P      D   W Y  SG ++VKSGY  L Q       P   S  S    ++ +WK     KI+ FL +   + LP    L  R     + C+ C    
Subjt:  -PVRAGAEDRIVWHYEKSGLFSVKSGY-RLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAG

Query:  ESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLL---------REGLEPVVGLVEW---------------------------AASYISSFQRATS
        E+  H+ + C F +     S     +    A S++  L             E    LV W                           A   +  ++  T 
Subjt:  ESSMHVFWHCKFFKAVLMESEFGSLIHNVQAGSMFDLL---------REGLEPVVGLVEW---------------------------AASYISSFQRATS

Query:  A--CGVGLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAE----GWAAVKGRDWQWRWV
        A  CG   Q V+     RW PP   W K N DA++ R+  + G+G V+R+  G V    +     ++S   AE     WA +    +Q+ +V
Subjt:  A--CGVGLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAE----GWAAVKGRDWQWRWV

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.8e-0543.18Show/hide
Query:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPED
        +G+RPS+ WRS++ GRELL RGL   +G G    V+   W+ ++
Subjt:  MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCGAGACCGTCCTTTATATGGAGGAGTTTGTTGTGGGGGAGAGAGTTGCTAGAAAGGGGCTTGCGTTGGCGGGTTGGGAGTGGGGAAAGTGTGCCGGTATATGG
AGTGAATTGGCTCCCTGAGGATGGTAATTTCAGGGTGCGATCACCAGTGACATTGGCGCCGGAGACTCGGGTTGCGGATCTGATGACGGCATCGGGGCAGTGGAACGAAG
GGCTCATTCGGCAGCACTTTAGGCCTCATGAGGTCAGTCTGATTTTGTCAATTCCGGTACGGGCTGGGGCGGAGGATAGGATTGTTTGGCATTATGAGAAGTCAGGCCTG
TTTTCGGTGAAAAGCGGATATCGGTTGGGTCAATCAGCCTGGCTTGCACAACTTCCGTCTTCCTCTTCGAACGAGTCGGGAATGGGTTGGTGGAAGGGGGTTTGGAAAAT
GTCTATCCCGAATAAGATCAAATTTTTTCTTCGGAGACTTTGTTTAGACCGCTTGCCCACGATTGATAACTTGGGTATTCGGGGTTGTGACGTTTTGAATGTTTGTGTCC
TATGTAGGCGAGCTGGGGAGTCTAGTATGCATGTCTTCTGGCATTGCAAGTTCTTCAAGGCGGTGTTGATGGAGTCTGAGTTTGGAAGCTTGATACATAATGTGCAGGCT
GGGTCTATGTTTGATCTCCTTAGAGAAGGGCTAGAACCAGTGGTGGGACTAGTGGAGTGGGCGGCGAGTTATATCTCGTCGTTCCAGCGGGCGACCTCGGCTTGTGGAGT
TGGGTTGCAGAGTGTCCATGCAAGGGAAGATGTTAGATGGAGCCCCCCGGAGGCTGGGTGGTATAAGGTGAACGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGGCGG
GTCTGGGAGTGGTGGTTCGAGATTCCTCGGGTCGGGTTATGCTGTCGGCATCCTTGGTGCAGCGGCATGTGCGAAGCCCGGAGATGGCTGAAGGATGGGCTGCGGTCAAG
GGGCGAGACTGGCAGTGGAGATGGGTCTGTGCCCATTGGTGTTGGAGACTGACTCTAGTCGGGTGGCTAGTTTTTTCCAAGATGAGGCTGGGGATGACTTCTCGGATGTG
GGTGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATCGAGACCGTCCTTTATATGGAGGAGTTTGTTGTGGGGGAGAGAGTTGCTAGAAAGGGGCTTGCGTTGGCGGGTTGGGAGTGGGGAAAGTGTGCCGGTATATGG
AGTGAATTGGCTCCCTGAGGATGGTAATTTCAGGGTGCGATCACCAGTGACATTGGCGCCGGAGACTCGGGTTGCGGATCTGATGACGGCATCGGGGCAGTGGAACGAAG
GGCTCATTCGGCAGCACTTTAGGCCTCATGAGGTCAGTCTGATTTTGTCAATTCCGGTACGGGCTGGGGCGGAGGATAGGATTGTTTGGCATTATGAGAAGTCAGGCCTG
TTTTCGGTGAAAAGCGGATATCGGTTGGGTCAATCAGCCTGGCTTGCACAACTTCCGTCTTCCTCTTCGAACGAGTCGGGAATGGGTTGGTGGAAGGGGGTTTGGAAAAT
GTCTATCCCGAATAAGATCAAATTTTTTCTTCGGAGACTTTGTTTAGACCGCTTGCCCACGATTGATAACTTGGGTATTCGGGGTTGTGACGTTTTGAATGTTTGTGTCC
TATGTAGGCGAGCTGGGGAGTCTAGTATGCATGTCTTCTGGCATTGCAAGTTCTTCAAGGCGGTGTTGATGGAGTCTGAGTTTGGAAGCTTGATACATAATGTGCAGGCT
GGGTCTATGTTTGATCTCCTTAGAGAAGGGCTAGAACCAGTGGTGGGACTAGTGGAGTGGGCGGCGAGTTATATCTCGTCGTTCCAGCGGGCGACCTCGGCTTGTGGAGT
TGGGTTGCAGAGTGTCCATGCAAGGGAAGATGTTAGATGGAGCCCCCCGGAGGCTGGGTGGTATAAGGTGAACGTAGATGCGTCCTTTAGGAGGGAGCGATGGCAGGCGG
GTCTGGGAGTGGTGGTTCGAGATTCCTCGGGTCGGGTTATGCTGTCGGCATCCTTGGTGCAGCGGCATGTGCGAAGCCCGGAGATGGCTGAAGGATGGGCTGCGGTCAAG
GGGCGAGACTGGCAGTGGAGATGGGTCTGTGCCCATTGGTGTTGGAGACTGACTCTAGTCGGGTGGCTAGTTTTTTCCAAGATGAGGCTGGGGATGACTTCTCGGATGTG
GGTGGCCTAG
Protein sequenceShow/hide protein sequence
MGSRPSFIWRSLLWGRELLERGLRWRVGSGESVPVYGVNWLPEDGNFRVRSPVTLAPETRVADLMTASGQWNEGLIRQHFRPHEVSLILSIPVRAGAEDRIVWHYEKSGL
FSVKSGYRLGQSAWLAQLPSSSSNESGMGWWKGVWKMSIPNKIKFFLRRLCLDRLPTIDNLGIRGCDVLNVCVLCRRAGESSMHVFWHCKFFKAVLMESEFGSLIHNVQA
GSMFDLLREGLEPVVGLVEWAASYISSFQRATSACGVGLQSVHAREDVRWSPPEAGWYKVNVDASFRRERWQAGLGVVVRDSSGRVMLSASLVQRHVRSPEMAEGWAAVK
GRDWQWRWVCAHWCWRLTLVGWLVFSKMRLGMTSRMWVA