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Lag0004351 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004351
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionExtensin domain containing protein
Genome locationchr6:3147999..3148301
RNA-Seq ExpressionLag0004351
SyntenyLag0004351
Gene Ontology termsGO:0009664 - plant-type cell wall organization (biological process)
GO:0005199 - structural constituent of cell wall (molecular function)
InterPro domainsIPR006706 - Extensin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEV24930.1 putative extensin domain-containing protein [Tanacetum cinerariifolium]1.7e-0541.18Show/hide
Query:  PSLSHG-RQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP------SPPPSAFLFLSPPPPA
        P L H    + P L+ S   ++++ SPPPP+ +++ SPPPP+    K+PPPP  +++ SPPPP      SPPP  +++ SPPPP+
Subjt:  PSLSHG-RQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP------SPPPSAFLFLSPPPPA

KGN62573.1 hypothetical protein Csa_021860 [Cucumis sativus]5.9e-1965.69Show/hide
Query:  MNGLGLLFLLFILPLCSLPSLSHGRQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLK--TPPPPSAFLFTSPPPPSPPPSAFLFLSPPPPAKP
        MNG+G LFLLF   L  L   SH    + EL  S KSA+LFTSPPPP+AFL+LSPPPPARRFL+  +PPPPSAFLF SP    PPPSAFL+ SPPPPA  
Subjt:  MNGLGLLFLLFILPLCSLPSLSHGRQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLK--TPPPPSAFLFTSPPPPSPPPSAFLFLSPPPPAKP

Query:  VE
        VE
Subjt:  VE

XP_023520927.1 extensin-like [Cucurbita pepo subsp. pepo]4.5e-1150Show/hide
Query:  MNGLGLLFLLFILPLCSLPSLSHGRQLSPELNHSGK--SAFLFTSP----------PPPAAFLFLSPPPPARRFLKTP--------------------PP
        MN +G  FLLFI  L S P L+     S EL HSG+  SAFLFTSP          PPPAAFLF SPPPP R F K+P                    PP
Subjt:  MNGLGLLFLLFILPLCSLPSLSHGRQLSPELNHSGK--SAFLFTSP----------PPPAAFLFLSPPPPARRFLKTP--------------------PP

Query:  PSAFLFTSPPPP------SPPPSAFLFLSPPPPA
        P+AFLF S  PP      SPPP+AFLF SPPPPA
Subjt:  PSAFLFTSPPPP------SPPPSAFLFLSPPPPA

XP_023909450.1 extensin-3-like [Quercus suber]2.0e-0658.33Show/hide
Query:  PPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPPS-------PPPSAFLFLSPPPPA
        PPPP++F F SPPPP+  +  +PPPPS+F F SPPPPS       PPPS+F F SPPPP+
Subjt:  PPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPPS-------PPPSAFLFLSPPPPA

XP_027148695.1 extensin-2-like [Coffea eugenioides]4.9e-0553.03Show/hide
Query:  FTSPPPPAAFLFLSPPPPA--------RRFLKTPPPPSAFLFTSPPPPSPPPSAFLFLSPPPPAKP
        ++ PPPPA F F SPPPP+        R     PPPP+ F F SPPPPS PP+ F F SPPPP+ P
Subjt:  FTSPPPPAAFLFLSPPPPA--------RRFLKTPPPPSAFLFTSPPPPSPPPSAFLFLSPPPPAKP

TrEMBL top hitse value%identityAlignment
A0A0A0LLD7 Extensin_2 domain-containing protein2.9e-1965.69Show/hide
Query:  MNGLGLLFLLFILPLCSLPSLSHGRQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLK--TPPPPSAFLFTSPPPPSPPPSAFLFLSPPPPAKP
        MNG+G LFLLF   L  L   SH    + EL  S KSA+LFTSPPPP+AFL+LSPPPPARRFL+  +PPPPSAFLF SP    PPPSAFL+ SPPPPA  
Subjt:  MNGLGLLFLLFILPLCSLPSLSHGRQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLK--TPPPPSAFLFTSPPPPSPPPSAFLFLSPPPPAKP

Query:  VE
        VE
Subjt:  VE

A0A2U1N836 Extensin_2 domain-containing protein5.2e-0539.29Show/hide
Query:  PSLSHGRQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP------SPPPSAFLFLSPPPPA
        P + H     P  + S + ++ + SPPPP+ +++ SPPPP+    K+PPPP  +++ SPPPP      SPPP  +++ SPPPP+
Subjt:  PSLSHGRQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP------SPPPSAFLFLSPPPPA

A0A5D3D5P0 Extensin-2-like6.8e-0550.77Show/hide
Query:  SGKSAFLFTS-PPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPPSP-PPSAFLFLSPPPPA
        +GK  +++ S PPPP+ + + SPPPP    LK+PPPPS + + SPPPPSP PP  +++ SPPPP+
Subjt:  SGKSAFLFTS-PPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPPSP-PPSAFLFLSPPPPA

A0A6P6FL24 extensin-2-like5.2e-0548.44Show/hide
Query:  FLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP-------SPPPSAFLFLSPPPP
        + + SPPPP A+ + SPPPPA  +   PPPP  + + SPPPP       SPPP A+++ SPPPP
Subjt:  FLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP-------SPPPSAFLFLSPPPP

A0A7J0E6L4 Proline-rich extensin-like family protein5.2e-0544.62Show/hide
Query:  AFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP------SPPPSAFLFLSPPPPA
        ++++ SPPPP  +++ SPPPP   +   PPPP  +++ SPPPP      SPPP A+ + SPPPP+
Subjt:  AFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP------SPPPSAFLFLSPPPPA

SwissProt top hitse value%identityAlignment
O65375 Leucine-rich repeat extensin-like protein 17.3e-0441.43Show/hide
Query:  PELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP---SPPPSAFLFLSPPPP
        P  + S    ++++SPPPP  +++ SPPPP   +   PPPP  ++++SPPPP   S PP  +++ SPPPP
Subjt:  PELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP---SPPPSAFLFLSPPPP

Arabidopsis top hitse value%identityAlignment
AT1G12040.1 leucine-rich repeat/extensin 15.2e-0541.43Show/hide
Query:  PELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP---SPPPSAFLFLSPPPP
        P  + S    ++++SPPPP  +++ SPPPP   +   PPPP  ++++SPPPP   S PP  +++ SPPPP
Subjt:  PELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP---SPPPSAFLFLSPPPP

AT1G26240.1 Proline-rich extensin-like family protein1.0e-0546.77Show/hide
Query:  FLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP-----SPPPSAFLFLSPPPP
        ++++SPPPP  +++ SPPPP   +   PPPP  +++ SPPPP     SPPPS +++ SPPPP
Subjt:  FLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP-----SPPPSAFLFLSPPPP

AT1G26250.1 Proline-rich extensin-like family protein8.0e-0645.16Show/hide
Query:  FLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP-----SPPPSAFLFLSPPPP
        ++++SPPPP  +++ SPPPP   ++ +PPPP  +++ SPPPP     SPPP  +++ SPPPP
Subjt:  FLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP-----SPPPSAFLFLSPPPP

AT2G43150.1 Proline-rich extensin-like family protein1.2e-0454.55Show/hide
Query:  SPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP--SPPPSAFLFLSPPPP
        SPPPP  + + SPPPP    +K+PPPP  +L++SPPPP  SPPP  +++ SPPPP
Subjt:  SPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP--SPPPSAFLFLSPPPP

AT4G08370.1 Proline-rich extensin-like family protein5.2e-0545.31Show/hide
Query:  SAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP-----SPPPSAFLFLSPPPP
        S +L++SPPPP  +++ SPPPP      +PP P  +++ SPPPP     SPPP  +++ SPPPP
Subjt:  SAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPP-----SPPPSAFLFLSPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGTTTAGGGTTATTGTTTCTGCTCTTCATTTTGCCTCTTTGCTCTCTTCCATCCCTCTCCCATGGCCGTCAACTGTCTCCGGAGCTCAACCATTCCGGCAAATC
TGCCTTCCTCTTCACCTCTCCGCCGCCTCCCGCCGCCTTCCTCTTCCTCTCTCCACCGCCTCCTGCGCGACGCTTCTTAAAAACTCCGCCGCCTCCTTCTGCCTTCCTCT
TCACCTCTCCGCCGCCTCCCAGTCCTCCTCCCTCTGCGTTTCTCTTCCTCTCTCCGCCGCCTCCGGCAAAGCCGGTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGTTTAGGGTTATTGTTTCTGCTCTTCATTTTGCCTCTTTGCTCTCTTCCATCCCTCTCCCATGGCCGTCAACTGTCTCCGGAGCTCAACCATTCCGGCAAATC
TGCCTTCCTCTTCACCTCTCCGCCGCCTCCCGCCGCCTTCCTCTTCCTCTCTCCACCGCCTCCTGCGCGACGCTTCTTAAAAACTCCGCCGCCTCCTTCTGCCTTCCTCT
TCACCTCTCCGCCGCCTCCCAGTCCTCCTCCCTCTGCGTTTCTCTTCCTCTCTCCGCCGCCTCCGGCAAAGCCGGTGGAGTGA
Protein sequenceShow/hide protein sequence
MNGLGLLFLLFILPLCSLPSLSHGRQLSPELNHSGKSAFLFTSPPPPAAFLFLSPPPPARRFLKTPPPPSAFLFTSPPPPSPPPSAFLFLSPPPPAKPVE