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Lag0004393 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004393
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationchr6:3460969..3468244
RNA-Seq ExpressionLag0004393
SyntenyLag0004393
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585589.1 hypothetical protein SDJN03_18322, partial [Cucurbita argyrosperma subsp. sororia]5.3e-5785.29Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRDT+GIDYKRS SFP A   AE++ FAESD+ERKN+EKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
XP_022951681.1 uncharacterized protein LOC111454424 [Cucurbita moschata]3.5e-5684.56Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VD DT+GIDYKRS SFP A   AE++ FAESD+ERKN+EKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
XP_023002545.1 uncharacterized protein LOC111496358 [Cucurbita maxima]1.4e-5786.03Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRDT+GIDYKRS SFP A  AAE++ FAESD+ERKN+EKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
XP_023536775.1 uncharacterized protein LOC111798054 [Cucurbita pepo subsp. pepo]1.0e-5583.09Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRA+SMP    VDRDT+GIDYKRS SFP A   AE++ F ESD+ERKN+E LKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
XP_038886573.1 uncharacterized protein LOC120076743 [Benincasa hispida]6.7e-6081.69Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM+GWNSPVLDPKSVKFKRNRSLTK+EIEAYW+SK+K EEEHLRAISMPVDRY+DR+T+GIDYKRS SFPPA   + E  FAE+D+ER+N+EKLKK 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSD
        GWWTRSNSAFLNEPPVLDGA K YAS YGVADVAS KLNHS+
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSD
TrEMBL top hitse value%identityAlignment
A0A1S3BBS7 uncharacterized protein LOC1034879791.2e-5477.46Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDRY DR+ +GIDYKRS SFPPA   A E  F E+ ++RKN+E+L+K 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSD
        GWWTRSNSAFLNEPPVLDGA+KA  S YGVADVAS KLNH++
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSD
A0A5A7VD66 Putative DNA polymerase epsilon catalytic subunit A1.2e-5477.46Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDRY DR+ +GIDYKRS SFPPA   A E  F E+ ++RKN+E+L+K 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSD
        GWWTRSNSAFLNEPPVLDGA+KA  S YGVADVAS KLNH++
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSD
A0A6J1CTD0 uncharacterized protein LOC1110140333.2e-5580.99Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLMAGWNSPV DPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVD +VDRD +GIDYKRS SFPPA   AEE     SD ERKN+EKLK N
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSD
         WWTRSNSAFLNEPPVLDGAAKAYA        ASFKLNHS+
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSD
A0A6J1GI71 uncharacterized protein LOC1114544241.7e-5684.56Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VD DT+GIDYKRS SFP A   AE++ FAESD+ERKN+EKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
A0A6J1KP90 uncharacterized protein LOC1114963586.8e-5886.03Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN
        MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRDT+GIDYKRS SFP A  AAE++ FAESD+ERKN+EKLKKN
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKN

Query:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
        GWW RSNSAFLNEPPVLDGAAKAYAS+YGV DVASF
Subjt:  GWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein4.1e-1538.52Show/hide
Query:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKK
        MGSLM+GW+S V DPKSV  +R +SLT+EEI+ +W++K+K  EEEH++A S  V +                   A + A+EK   +   E ++    K 
Subjt:  MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKK

Query:  NGWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVA
        +GWW ++  AFLNEP   +G    Y S++ VA +A
Subjt:  NGWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAATCGGTCGCTTACAAAGGAGGAAATCGAAGCTTACTGGAGATC
GAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTATGCCGGTGGATCGTTATGTCGATCGCGATACGATCGGAATAGACTACAAAAGGTCGAGGTCGTTTCCGC
CGGCGACCGCTGCGGCGGAGGAAAAAGGATTTGCAGAGAGCGATGTGGAGAGGAAAAACGTAGAGAAATTGAAGAAAAATGGCTGGTGGACGAGGAGCAATTCGGCGTTT
CTGAATGAACCGCCAGTCCTCGACGGCGCAGCGAAAGCATACGCGTCGCGGTACGGCGTCGCAGACGTGGCCTCGTTCAAGTTGAATCACAGCGATGATGGAGTAATTTT
GTATCGTTCCGAAACGCAAAGAGCGGGCGAAAACAATACAATACCAACTCGAAAACACGACCAGGAAGCGGATCCTGGAGGAGAGGTAGGCCGAAGGGATTGGGCCAAGG
TCCAATTCCATGCTCGGCCTCAGACTTGGGCCAAGGCCGAGGCTATGGTCGGCCTTGACTCACTTGTATGGGTCGAGTTTCTTTCTCCATGCTTGGTTCTTGGTGTACTT
GAGAGTCGTCGGACTCCACCACTGCAGCCATCATCGGACTCCACCGTCGCAGCCGTCGCCGGACTCCACCGCTCACCCATCATCCCTCATCTCTCTCTCACACACCCGTC
ACTCTCTCTGTGCAATCTCTCCCCGTCGCCGAACACCCAACGTCACTCGTCGCCGCACCTTGCTGAAAACTCGTGCCTCTCATCTGAAACGGGTTTCAGGCGAGACCGAA
ACGGGGACAAAACTTTTTACAGCGCGTGGGTTTTTCAGGCGAGACCCTCCTCCTCGACGCTGAAAACCCATGCGGCGACCGGAGGAGAAGAAAATGAAGGATTAAAAAAA
AGGAAAATGAAGATGGAGGAGAAAAAAGAGAGGAAAGAAATGTGGACGACGCCGGCGAAGAAATACGTGGTTACTCAAGGTGGGTTTTGGTGGGTTTCAGTTCGTGATTC
GTGGGTTTCGAAGAAAAACGTGAAGGAGGTGGGTATCGGTTTTGAGGTTCTCGAGACGGGAGGGGACGATGGCGTGGGGTCGGCGACGGCGAAAGGAACGAAGCAGGGGA
GGCGTTGCTGGTCGCGTGCGAGTGAGAGAGATGGAGAAGGAGAGAAAGAAACAGGGAGAAGGGAAGATGAGAGAAACAGAGAGGGAGGAGAAGAAAGAAAGAAAAGAAGA
AAAAAAAGGGAAAGGAAAAGATGGGGAAAGAAAAGAATGAAAAAAAAAAAAAAAAAACTTCGCCGGCGACCTGGTTTGATGGTGGCTGGTATGAAGAAGATGGTGGTTGA
AGAAGGAGGTGAGATGGAGAGAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAATCGGTCGCTTACAAAGGAGGAAATCGAAGCTTACTGGAGATC
GAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTATGCCGGTGGATCGTTATGTCGATCGCGATACGATCGGAATAGACTACAAAAGGTCGAGGTCGTTTCCGC
CGGCGACCGCTGCGGCGGAGGAAAAAGGATTTGCAGAGAGCGATGTGGAGAGGAAAAACGTAGAGAAATTGAAGAAAAATGGCTGGTGGACGAGGAGCAATTCGGCGTTT
CTGAATGAACCGCCAGTCCTCGACGGCGCAGCGAAAGCATACGCGTCGCGGTACGGCGTCGCAGACGTGGCCTCGTTCAAGTTGAATCACAGCGATGATGGAGTAATTTT
GTATCGTTCCGAAACGCAAAGAGCGGGCGAAAACAATACAATACCAACTCGAAAACACGACCAGGAAGCGGATCCTGGAGGAGAGGTAGGCCGAAGGGATTGGGCCAAGG
TCCAATTCCATGCTCGGCCTCAGACTTGGGCCAAGGCCGAGGCTATGGTCGGCCTTGACTCACTTGTATGGGTCGAGTTTCTTTCTCCATGCTTGGTTCTTGGTGTACTT
GAGAGTCGTCGGACTCCACCACTGCAGCCATCATCGGACTCCACCGTCGCAGCCGTCGCCGGACTCCACCGCTCACCCATCATCCCTCATCTCTCTCTCACACACCCGTC
ACTCTCTCTGTGCAATCTCTCCCCGTCGCCGAACACCCAACGTCACTCGTCGCCGCACCTTGCTGAAAACTCGTGCCTCTCATCTGAAACGGGTTTCAGGCGAGACCGAA
ACGGGGACAAAACTTTTTACAGCGCGTGGGTTTTTCAGGCGAGACCCTCCTCCTCGACGCTGAAAACCCATGCGGCGACCGGAGGAGAAGAAAATGAAGGATTAAAAAAA
AGGAAAATGAAGATGGAGGAGAAAAAAGAGAGGAAAGAAATGTGGACGACGCCGGCGAAGAAATACGTGGTTACTCAAGGTGGGTTTTGGTGGGTTTCAGTTCGTGATTC
GTGGGTTTCGAAGAAAAACGTGAAGGAGGTGGGTATCGGTTTTGAGGTTCTCGAGACGGGAGGGGACGATGGCGTGGGGTCGGCGACGGCGAAAGGAACGAAGCAGGGGA
GGCGTTGCTGGTCGCGTGCGAGTGAGAGAGATGGAGAAGGAGAGAAAGAAACAGGGAGAAGGGAAGATGAGAGAAACAGAGAGGGAGGAGAAGAAAGAAAGAAAAGAAGA
AAAAAAAGGGAAAGGAAAAGATGGGGAAAGAAAAGAATGAAAAAAAAAAAAAAAAAACTTCGCCGGCGACCTGGTTTGATGGTGGCTGGTATGAAGAAGATGGTGGTTGA
AGAAGGAGGTGAGATGGAGAGAGAGTAA
Protein sequenceShow/hide protein sequence
MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAF
LNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVILYRSETQRAGENNTIPTRKHDQEADPGGEVGRRDWAKVQFHARPQTWAKAEAMVGLDSLVWVEFLSPCLVLGVL
ESRRTPPLQPSSDSTVAAVAGLHRSPIIPHLSLTHPSLSLCNLSPSPNTQRHSSPHLAENSCLSSETGFRRDRNGDKTFYSAWVFQARPSSSTLKTHAATGGEENEGLKK
RKMKMEEKKERKEMWTTPAKKYVVTQGGFWWVSVRDSWVSKKNVKEVGIGFEVLETGGDDGVGSATAKGTKQGRRCWSRASERDGEGEKETGRREDERNREGGEERKKRR
KKRERKRWGKKRMKKKKKKLRRRPGLMVAGMKKMVVEEGGEMERE