CuGenDBv2

Gene ID	Lag0004473
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ribonuclease H-like superfamily protein
Genome location	chr6:4233174..4239266
RNA-Seq Expression	Lag0004473
Synteny	Lag0004473
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR026960 - Reverse transcriptase zinc-binding domain IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_030479133.1 uncharacterized protein LOC115696372 [Cannabis sativa]

3.4e-121

34.74

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Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  A+   L  Y  ASGQ +N +KS M FSPN P  ++ S +QI+GMPI +    YLG+P+   R++   F  +K+++W+ +  W  K FS+GGKEVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V Q+IPT+ MSCFRLPV LC+++  MMAKFWWGS+ + KKIHWK+W F+CK K  GG+ FR    FN+ALLAKQ WRIF +P  L+S+V+ G Y     
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         ++A      S+ W+G VW R LL  G+R +VG G +I+   D WIP    FKP     ++ N    VAD+IT ++ WN+  +++  +  D + I  IP+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S +   DRW+WHY  +G+Y+V SGY  A     + +S+ S+  + WW + W   LP+K+K+F WK     +P A SL+ R++  S  C +C    E++ H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLG----SPIVEWTHQCEWVVNYWAEISRGKQEVVSDH
        AL  C  AK +       +D          D L+HL+   +++ FE      W +W++RN  + G    +P+  WT    ++  Y   I+       S+ 
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLG----SPIVEWTHQCEWVVNYWAEISRGKQEVVSDH

Query:  THLNTCAL---EADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIG
        T   + A      +    L  DAA+  +    G+GV++ N  G +  A+             E +A+  GL      ++    V +D L  +  +NG++ 
Subjt:  THLNTCAL---EADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIG

Query:  EWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
        ++      +S++      F + C S+I R+ N+ A  LA+ AL      +W+E+ P  + S+
Subjt:  EWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]

1.7e-120

34.34

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Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  ++   L  Y  ASGQ++N +KS M FSPN P  +++S +QI+GMPI      YLG+P+   R++   F  +K+R+W+ +  W  K FS+GGKEVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V QAIPT+ MSCFRL    C  +  MMA+FWWGS+ + KKIHWK W  +C  K  GGL FR    FN+A LAKQ WRIF  P  L+S+V+ GRY H   
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         ++A V    S+ W+G VW R LLS G+  ++G+G  +    D WIP    FKPLR   S  N    VAD+IT ++ W++  + N  +  D + I  IP+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S  +  DRW WHY  +G+YTVKSGY  A        S+SS   + WW   W   LP+K+++F W+  +  LP A +L+ R++  S  C +C++  E++ H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNT----RLLGSPIVEWTHQCEWVVNYWAEISRGKQEV--VS
        AL  C  AK +  H   ++D          D L+ L+  L +++ EK     W +W++RN     + L  P+   +    ++ N+ +  S     V  V+
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNT----RLLGSPIVEWTHQCEWVVNYWAEISRGKQEV--VS

Query:  DHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGE
                    +  + +  DAA+  + +  G+GV++ +  G +  AM             E +A+  GL+   ++++Q   V +D L  +  + G+  +
Subjt:  DHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGE

Query:  WLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
               + ++      F + C S++ RD N+ A  LAK AL    + +W+E  P  + S+
Subjt:  WLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

XP_030502555.1 uncharacterized protein LOC115717715 [Cannabis sativa]

3.3e-116

33.28

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Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  ++   L  Y  ASGQ++N +KS M FSPN P  +++S +QI+GMPI D    YLG+P+   R++   F  +K+R+W+ +  W  K FS+GGKEVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V QAIPT+ MSCFRL    C  +  MMA+FWWGS+ + KKIHWK W  +C  K  G L FR    FN+A LAKQ WR+F NP  L+S+V+ GRY H+  
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         LSA      S+ W+G +W R LL  G+R ++G G ++    D WIP    FKP R    + N    VA +IT ++ WN   +    +  D   I  IP+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S  +  D W+WHY  +G YTVKS Y  A        ++SS   + WW   W   LP+K+++F WK  +  LP A +L+ R++  S  C +C++  E++ H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQEV------VS
        AL  C  AK +  +   ++D          D L+ L+  L  ++ E+     W +W++RN  + G  + +          Y A  +  + +       V+
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQEV------VS

Query:  DHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGE
           +        +  + +  DAA+  +    G+GV++ +  G++  AM             E +A+  GL+L  ++++Q  +V +D L  +  ING   +
Subjt:  DHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGE

Query:  WLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
               + ++        + C S++ RD N+ A  LAK AL    + +W+E  P  + S+
Subjt:  WLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]

1.6e-115

35.6

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Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  A+H  L  Y  ASGQVIN EK  + FS N     ++  K ++GMPI     +YLG+PS   +N+K  F G+  ++W+ L  WK   FS GGKEVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V QAIPT+ MSCFRLPVTLC  +  MMA+FWWGST   K IHWK W+F+CK K  GGL FR+   FN+ALLAKQ WRI   P  L+S ++  RY  N +
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         L A + SN S+ WR  VW + LL  G+R +VG+G  I    D W+P  T+FKP      + N    VAD IT  + W++  +E    + D N + +IP+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S    +D  +W+ S  G Y VKSGY  A+       ST SN  +HWW   W  KLP K+++F+WK FH  LP A  L+RR +  SP C +CN   ETV H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQEVV-------
        AL  C RAK + +     +D      ++ AD L+ L+  L  ++ E   +  WS+W+ RN    G+ +        +  +Y  E  + + +         
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQEVV-------

Query:  --------SDHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPF-----AAEVQAIMHGLRLTARM--EIQRVHVY
                S+  H         G + L  DAA+    +  G+G +L N  G I  A+         PF     A E++A+   L L   +   +    + 
Subjt:  --------SDHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPF-----AAEVQAIMHGLRLTARM--EIQRVHVY

Query:  SDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
        +DSL  ++ +             ++ ++ L   F      ++ R  N  A  LAK AL    + +W+  FP  L+++
Subjt:  SDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]

3.1e-114

33.76

Show/hide

Query:  SAHSVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEV
        S  S  A+H  L  Y  ASGQ++N EKS + FSPN     +   + ++ MPI     +YLG+PS   R++   F G+  ++W+ +  W+ + FS+GGKEV
Subjt:  SAHSVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEV

Query:  LIKSVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAH
        L+K+V QAIPT+ MSCF+LPV LC+ + ++M++FWWG +     IHWK W F+CK K  GG+ FR+   FN+ALLAKQ WRI  +P  L+++V+  RY  
Subjt:  LIKSVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAH

Query:  NMSVLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAA
            L A   +  S+ W+  VW + LL  G+R ++G+GA +     PWIP  ++FKPL     + + D  VADFIT S+ W+V K++   T  D + I +
Subjt:  NMSVLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAA

Query:  IPISVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNET
        IP+S+   ED  +WHYS  G YTVKSGYK A     D+   SS+ T+ WW   W  KLP+KI++F W+A+HE LPTA  L  R +  SP+C +C    ET
Subjt:  IPISVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNET

Query:  VDHALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEI--------SRGK
        ++HA   C RAK +  +    ++  + +  +F+D L++++ QL+    E      W +W  RN               ++  +Y AE         S G 
Subjt:  VDHALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEI--------SRGK

Query:  QEVVSDHTHLNTCALEA------------------------------------DGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPF
        +  VS  T LN+ A  +                                     G + +  DAAV       GL  +L N  G+I  AM       +   
Subjt:  QEVVSDHTHLNTCALEA------------------------------------DGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPF

Query:  AAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLL
          E  AI  GL+L   + +    + SDSL  +  +             ++++  L   F     S++ R  N +A  LAK AL    +  W+E  P  L+
Subjt:  AAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLL

Query:  SM
        ++
Subjt:  SM

TrEMBL top hits

e value

%identity

Alignment

A0A803NM27 Uncharacterized protein

6.5e-118

35.29

Show/hide

Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  A+  +L  Y  ASGQ +N +KS M FSPN     + S + I+GMPI +    YLG+P+   R++K  F  +K+R+W+ L  W  K FS+GGKEVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V Q+IPT+ MSCF+LPV  C ++  +M+ FWWGST +KKKIHWK+W F+CK K  GGL FR+   FN+ALLAKQ WR+F NP  L+ +V+ GRY     
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         LSA      S+ W+GF W R LL  G+R QVGNG  I    DPWIP  + F P+    +  N    VAD+ITP K WNV+K+    +  D   I ++P+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S     D WVWH +  G Y VKSGY  A +   +   + S+    WW + W  KLP K+K+F WKA H  LP A  L++R+   S  C +C    E+V H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLG----SPIVEWTHQCEWVVNYWA----EISRGKQEV
        A+  CK A+ +        ++   V     D L  ++    +++ E      WS+W++RN  L G     P V       ++ ++ +     +  G    
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLG----SPIVEWTHQCEWVVNYWA----EISRGKQEV

Query:  VSDHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEI
         +   H           + L  DAA   T    G G ++ +  GN+  AM         P   E + + + L+   ++  +   V +DSL  +  +    
Subjt:  VSDHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEI

Query:  GEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
         +    +  I ++        +VC  ++ RD N+ A  LAK AL+      W+E+FP  +LS+
Subjt:  GEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

A0A803PIB6 Uncharacterized protein

8.2e-121

34.34

Show/hide

Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  ++   L  Y  ASGQ++N +KS M FSPN P  +++S +QI+GMPI      YLG+P+   R++   F  +K+R+W+ +  W  K FS+GGKEVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V QAIPT+ MSCFRL    C  +  MMA+FWWGS+ + KKIHWK W  +C  K  GGL FR    FN+A LAKQ WRIF  P  L+S+V+ GRY H   
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         ++A V    S+ W+G VW R LLS G+  ++G+G  +    D WIP    FKPLR   S  N    VAD+IT ++ W++  + N  +  D + I  IP+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S  +  DRW WHY  +G+YTVKSGY  A        S+SS   + WW   W   LP+K+++F W+  +  LP A +L+ R++  S  C +C++  E++ H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNT----RLLGSPIVEWTHQCEWVVNYWAEISRGKQEV--VS
        AL  C  AK +  H   ++D          D L+ L+  L +++ EK     W +W++RN     + L  P+   +    ++ N+ +  S     V  V+
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNT----RLLGSPIVEWTHQCEWVVNYWAEISRGKQEV--VS

Query:  DHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGE
                    +  + +  DAA+  + +  G+GV++ +  G +  AM             E +A+  GL+   ++++Q   V +D L  +  + G+  +
Subjt:  DHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGE

Query:  WLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
               + ++      F + C S++ RD N+ A  LAK AL    + +W+E  P  + S+
Subjt:  WLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

A0A803PKJ2 Uncharacterized protein

2.9e-118

33.33

Show/hide

Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  ++   L  Y  ASGQ++N +KS M FSPN P  +++S +QI+GMPI D    YLG+P+   R++   F  +K+R+W+ +  W  K FS+GG EVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V QAIPT+ MSCFRL    C  +  MMA+FWWGS+ + KKIHWK W  +C  K  GGL FR    FN+A LAKQ WR+F NP  L+S+V+ GRY H+  
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         LSA      S+ W+G +W R LL  G+R ++G G ++    D WIP    FKP +    + N   WVA +IT ++ WN   +    +  D   I  IP+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S  +  D W+WHY  +G YTVKSGY  A        ++SS   + WW   W   LP+K+++F WK  +  LP A +L+ +++  S  C +C++  E++ H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQEVVSDHTHLN
        AL  C  AK +  +    +D          D L+ L+  L +++ E+     W +W++RN  + G  + +        ++  AE+     + V  HT   
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQEVVSDHTHLN

Query:  TCALEAD-----------GAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMIN
           + AD             + +  DAA+  +    G+GV++ +  G++  AM             E +A+  GL+    +++Q  +V +D +  +  IN
Subjt:  TCALEAD-----------GAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMIN

Query:  GEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
        G   +       + ++        + C S++ RD N+ A  LAK AL    + +W+E  P  + S+
Subjt:  GEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

A0A803Q8J4 Uncharacterized protein

5.5e-117

35.2

Show/hide

Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  A+  +L  Y  ASGQ +N +KS M FSPN     ++S + I+GMPI D    YLG+P+   R++K+ F  +K+R+W+ L  W  K FS+GGKEVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V Q+IPT+ MSCF+LPV  C ++  MM+ +WWG+T +KKKIHWK+W F+C  K  GGL FR+   FN+ALLAKQ WR+F N   L+ +V+ GRY     
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         LSA      S+ W+G  W R LL  G+RK+VGNG SI    DPWIP    F P+     + N +  VAD+ITP + WN +K+    +  D   I ++P+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S     D W+WH    G Y VKSGY  A  ++ DT  + SN    WW + W  KLP K+K+F WKA H  LP A  L++++   S  C +C    E+V H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLG----SPIVEWTHQCEWVVNYWAEISRGKQEVVSDH
        AL  CK A+ +        ++   V  N  D L  ++    +++ E      WS+W++RN  + G     P V       ++ NY +         +S  
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLG----SPIVEWTHQCEWVVNYWAEISRGKQEVVSDH

Query:  THLNTCALEADGAVT---LFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIG
           +     +    T   L  DAA     +  G G ++ +  GN+  AM    +    P   E + + + L+   ++  +   V +DSL     +     
Subjt:  THLNTCALEADGAVT---LFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIG

Query:  EWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
             +  I ++        +VC +++ RD N+ A  LAK AL+      W+E+FP  +LS+
Subjt:  EWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

A0A803QGT2 Uncharacterized protein

1.6e-121

34.74

Show/hide

Query:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK
        S  A+   L  Y  ASGQ +N +KS M FSPN P  ++ S +QI+GMPI +    YLG+P+   R++   F  +K+++W+ +  W  K FS+GGKEVL+K
Subjt:  SVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIK

Query:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS
        +V Q+IPT+ MSCFRLPV LC+++  MMAKFWWGS+ + KKIHWK+W F+CK K  GG+ FR    FN+ALLAKQ WRIF +P  L+S+V+ G Y     
Subjt:  SVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMS

Query:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI
         ++A      S+ W+G VW R LL  G+R +VG G +I+   D WIP    FKP     ++ N    VAD+IT ++ WN+  +++  +  D + I  IP+
Subjt:  VLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIPI

Query:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH
        S +   DRW+WHY  +G+Y+V SGY  A     + +S+ S+  + WW + W   LP+K+K+F WK     +P A SL+ R++  S  C +C    E++ H
Subjt:  SVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDH

Query:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLG----SPIVEWTHQCEWVVNYWAEISRGKQEVVSDH
        AL  C  AK +       +D          D L+HL+   +++ FE      W +W++RN  + G    +P+  WT    ++  Y   I+       S+ 
Subjt:  ALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLG----SPIVEWTHQCEWVVNYWAEISRGKQEVVSDH

Query:  THLNTCAL---EADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIG
        T   + A      +    L  DAA+  +    G+GV++ N  G +  A+             E +A+  GL      ++    V +D L  +  +NG++ 
Subjt:  THLNTCAL---EADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIG

Query:  EWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM
        ++      +S++      F + C S+I R+ N+ A  LA+ AL      +W+E+ P  + S+
Subjt:  EWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWLLSM

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

1.2e-47

27.44

Show/hide

Query:  VPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGG
        +P    R  KD F  + +RV   + GW+ K  S  G+  L K+V  ++P   MS   LP ++ + L ++   F WGST EKKK H  +W  +C PK+ GG
Subjt:  VPSSFSRNRKDDFKGVKQRVWQTLQGWKGKFFSMGGKEVLIKSVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGG

Query:  LNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMSVLSAP---VKSNCSVFWRGF-VWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKP
        L  R  K  N+AL++K  WR+      L + V+  +Y H   +  +     K + S  WR   +  R ++SHG+    G+G  I+F+ D W+    S KP
Subjt:  LNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMSVLSAP---VKSNCSVFWRGF-VWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKP

Query:  LRIDMSN----INDDPWVA-DFITPSKGWNVAKIENVVTKEDANVIAAIPISVV-NEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWG
        L +++ N     + D  VA D   P +GW+ AKI+   T      + A+ + +V    DR  W +S++G ++V+S Y+   M TVD V   +     ++ 
Subjt:  LRIDMSN----INDDPWVA-DFITPSKGWNVAKIENVVTKEDANVIAAIPISVV-NEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWG

Query:  ALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDHALCGCKRAKMICDHVFP-RVDDHIPVENNFADRLIHLARQLKEADFEK
         LW  ++P ++K F+W   ++ + T     RR +  S  C +C    E++ H L  C     I   V P R       ++ F     +L  +    D   
Subjt:  ALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDHALCGCKRAKMICDHVFP-RVDDHIPVENNFADRLIHLARQLKEADFEK

Query:  A---CIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQ-EVVSDHTH---------LNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNE
        +    +  W  W  R   + G    +   + ++V  +  E+ R     V+   T          ++ C     G V +  D A       A  G +L + 
Subjt:  A---CIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQ-EVVSDHTH---------LNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNE

Query:  VGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLS----VCFSYIPRDKNRKADA
         G  CG   +      +P  AE+  + +GL      ++ RV +  DS     +I G +   +   H +S L  LC GFL     V   ++ R+ NR AD 
Subjt:  VGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLS----VCFSYIPRDKNRKADA

Query:  LAKDA
        LA  A
Subjt:  LAKDA

P93295 Uncharacterized mitochondrial protein AtMg00310

3.4e-31

44.74

Show/hide

Query:  AIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKE-LGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMSVLS
        A+P + MSCFRL   LC  L   M +FWW S E K+KI W  W  +CK KE  GGL FRDL  FN+ALLAKQ +RI   P  L+S+++  RY  + S++ 
Subjt:  AIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKE-LGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMSVLS

Query:  APVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPL
          V +  S  WR  +  R LLS G+ + +G+G   K + D WI  ET   PL
Subjt:  APVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPL

Arabidopsis top hits

e value

%identity

Alignment

AT1G10000.1 Ribonuclease H-like superfamily protein

6.8e-11

26.33

Show/hide

Query:  KIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDHALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQ--LKEADFEKACI---AF
        KIK+F+WKA    LP    L RR +  +  C  C    ET  H L  C  A  +  ++ P    HIP+     + L  L +   L       A +     
Subjt:  KIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDHALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQ--LKEADFEKACI---AF

Query:  WSVWNNRNTRLLGS---PIVEWTHQCEWVVNYW--AEISRGKQEVVSDHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYES
        W +W  RN  +  +    ++E   +       W  A+++  K  V +   + +T  L  D     + DAA       AG G +            EI   
Subjt:  WSVWNNRNTRLLGS---PIVEWTHQCEWVVNYW--AEISRGKQEVVSDHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNICGAMEIYES

Query:  SA-----LSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNM
        SA      SP AAE  AI   +    ++E   + V SDS + +  +N  +    E+   + E+  +   F S+ F +IPR  N  ADA AK +L    N+
Subjt:  SA-----LSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNM

AT3G09510.1 Ribonuclease H-like superfamily protein

2.8e-28

23.82

Show/hide

Query:  RYAHNMSVLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQD------PWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVV
        RY  ++S+L A V+   S  W   +    LL  G R  +G+G +I+   D      P  P  T      + ++N+ +      F      W+ +KI   V
Subjt:  RYAHNMSVLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQD------PWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVV

Query:  TKEDANVIAAIPISVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGA------LWNSKLPTKIKVFIWKAFHECLPTAYSLWRRR
         + D   I  I ++   + D+ +W+Y+  G YTV+SGY    + T D  ST+        G+      +WN  +  K+K F+W+A  + L T   L  R 
Subjt:  TKEDANVIAAIPISVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGA------LWNSKLPTKIKVFIWKAFHECLPTAYSLWRRR

Query:  MDVSPKCGMCNKKNETVDHALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKE---ADFEKACIAF--WSVWNNRN----TRLLGSPIVEWT
        M + P C  C+++NE+++HAL  C  A M        +  +  + N+F + + ++   +++   +DF K    +  W +W  RN     +   SP  +  
Subjt:  MDVSPKCGMCNKKNETVDHALCGCKRAKMICDHVFPRVDDHIPVENNFADRLIHLARQLKE---ADFEKACIAF--WSVWNNRN----TRLLGSPIVEWT

Query:  HQCEWVVNYWAEISRGKQEVVSDHTHLNTCALEADGAVTLFA----DAAV-LPTLDGAGLGVLLVNEVGN--ICGAMEIYESSALSPFAAEVQAIMHGLR
           +   + W   ++  ++  S    +    +E       +     DA   +  L+  G G ++ N  G     G+M++  +S  +P  AE +A++  L+
Subjt:  HQCEWVVNYWAEISRGKQEVVSDHTHLNTCALEADGAVTLFA----DAAV-LPTLDGAGLGVLLVNEVGN--ICGAMEIYESSALSPFAAEVQAIMHGLR

Query:  LTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWL
         T      +V +  D    I +ING I     + + + ++      F S+ F +I R  N+ A  LAK    +        + P+WL
Subjt:  LTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDALMHQQNMLWVENFPLWL

AT3G25270.1 Ribonuclease H-like superfamily protein

1.5e-13

23.38

Show/hide

Query:  LWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDHALCGCKRAKMI-----CDHVFPRVDDHIPVENNFADRLIHLARQLKEAD
        +W  K   KIK F+WK     L T  +L RR +   P+C  C +++ET  H    C  A+ +       H   R    I +E      L       +   
Subjt:  LWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDHALCGCKRAKMI-----CDHVFPRVDDHIPVENNFADRLIHLARQLKEAD

Query:  FEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWV---VNYWAE----ISRGKQEVVSDHTHLNTCA-----LEADGAVTLFADAAVLPTLDGAGLGVLLV
        F  A    W +W +RN  +     + W +  +     V  W +    +    Q+V S      T A           +    D A       A  G L+ 
Subjt:  FEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWV---VNYWAE----ISRGKQEVVSDHTHLNTCA-----LEADGAVTLFADAAVLPTLDGAGLGVLLV

Query:  NEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGE---IGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKAD
        +E G   G+ +   S+      +E QA++  ++       ++V    DS     ++N E    G +    +WI E     K F    F ++PR  N+ AD
Subjt:  NEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGE---IGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKAD

Query:  ALAKDALMHQQNMLWVENFPLWLLS
         LAK  L   Q+  +    P ++ S
Subjt:  ALAKDALMHQQNMLWVENFPLWLLS

AT4G29090.1 Ribonuclease H-like superfamily protein

1.4e-56

28.35

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Query:  AIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMSVLSA
        A+PT+ M+CF LP T+C  +  ++A FWW + +E K +HWK WD +   K  GG+ F+D++ FN ALL KQ+WR+ + P  L++KV   RY H    L+A
Subjt:  AIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMSVLSA

Query:  PVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRI------DMSNINDDPWVADFITPS-KGWNVAKIENVVTKEDANVIAA
        P+ S  S  W+    ++ +L  G R  VGNG  I  ++  W+  + +   LR+      + ++++    V+D I  S + W    IE +  + +  +I  
Subjt:  PVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRI------DMSNINDDPWVADFITPS-KGWNVAKIENVVTKEDANVIAA

Query:  IPISVVNEEDRWVWHYSKNGNYTVKSGY--------KQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCG
        +        D + W Y+ +G+YTVKSGY        K++    V   S +  Y K     +W S+   KI+ F+WK     LP A +L  R +     C 
Subjt:  IPISVVNEEDRWVWHYSKNGNYTVKSGY--------KQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCG

Query:  MCNKKNETVDHALCGCKRAKMICDHVFPRVDDHIPVENNFADRL---IHLARQLKEAD--FEKAC----IAFWSVWNNRNTRLLGSPIVEWTHQ------
         C    ETV+H L  C  A++     +      IP+   +AD +   ++    L   +  +EKA        W +W NRN  +      E+  Q      
Subjt:  MCNKKNETVDHALCGCKRAKMICDHVFPRVDDHIPVENNFADRL---IHLARQLKEAD--FEKAC----IAFWSVWNNRNTRLLGSPIVEWTHQ------

Query:  ----CEWVVNYWAEISRGKQEVVSDHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNI--CGAMEIYESSALSPFAAEVQAIMHGLRLTA
             EW +   AE    K +V  + +            V    DA      +  G+G +L NE G +   GA  +      S   AE++A+   +   +
Subjt:  ----CEWVVNYWAEISRGKQEVVSDHTHLNTCALEADGAVTLFADAAVLPTLDGAGLGVLLVNEVGNI--CGAMEIYESSALSPFAAEVQAIMHGLRLTA

Query:  RMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDAL
        R +   V   SDS   I ++N +   W  ++  I +L  L   F  V F +IPR+ N  A+ +A+++L
Subjt:  RMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKADALAKDAL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.4e-32

44.74

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Query:  AIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKE-LGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMSVLS
        A+P + MSCFRL   LC  L   M +FWW S E K+KI W  W  +CK KE  GGL FRDL  FN+ALLAKQ +RI   P  L+S+++  RY  + S++ 
Subjt:  AIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKE-LGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSKVIHGRYAHNMSVLS

Query:  APVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPL
          V +  S  WR  +  R LLS G+ + +G+G   K + D WI  ET   PL
Subjt:  APVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPL

Sequences

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CDS sequence

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ATGAAACGATTCCTTCCTTCAGATTCGAGTGTTGAAGTTGAAGAAGAAGAAGAAGAAACAGAGGCGAAGAACAGAGGCGGTGGCTCGGCTCACTCCGTGACAGCGCTTCA
TTCTCTTCTTAAAAAGTATGAAATAGCCTCAGGACAAGTCATTAATGTGGAAAAGTCTGCAATGTTCTTCTCACCGAACGTGCCAGCGGAACTTCGTGTATCTCTGAAAC
AAATCATGGGCATGCCGATTGTTGATAATCTGGGCAGATACTTAGGCGTGCCGTCGTCTTTTTCTAGAAATAGGAAAGATGATTTCAAGGGGGTCAAACAACGGGTTTGG
CAAACCTTACAGGGTTGGAAAGGTAAATTTTTCTCCATGGGTGGAAAAGAGGTGCTCATAAAAAGTGTGGCACAAGCTATTCCTACTTTCATAATGAGTTGTTTCAGACT
CCCGGTTACTCTTTGCGATGACCTGCATAAAATGATGGCTAAATTCTGGTGGGGCTCTACGGAGGAGAAAAAGAAAATTCATTGGAAGCGCTGGGATTTTATGTGTAAAC
CAAAAGAGTTGGGCGGGTTAAATTTCCGGGACTTGAAAGTCTTCAATAAGGCACTGTTAGCAAAACAGGTTTGGCGAATTTTTACAAATCCGGGTCTCCTAGTATCCAAA
GTCATCCATGGAAGATATGCCCATAATATGTCTGTTTTATCTGCCCCTGTTAAATCCAACTGCTCGGTTTTCTGGAGAGGATTTGTATGGGCTCGTGGCCTACTTTCCCA
CGGGATGCGTAAACAGGTTGGCAATGGAGCATCTATCAAGTTCTTCCAAGACCCGTGGATTCCTAAGGAGACTAGTTTTAAACCTCTACGAATTGACATGTCCAATATCA
ATGACGATCCTTGGGTCGCGGATTTTATAACTCCATCCAAAGGATGGAATGTTGCGAAAATAGAAAATGTCGTAACCAAGGAAGATGCTAATGTAATTGCGGCTATCCCT
ATCAGTGTTGTTAATGAGGAAGATAGATGGGTTTGGCATTACTCCAAGAATGGAAATTATACGGTCAAAAGTGGTTATAAACAGGCAATTATGGCAACAGTTGATACCGT
GTCAACATCTTCCAATTACACCAAACATTGGTGGGGTGCTCTATGGAACTCAAAACTTCCTACCAAGATTAAAGTTTTCATCTGGAAAGCATTCCATGAATGCTTACCAA
CAGCTTATAGCCTTTGGAGAAGAAGAATGGATGTATCTCCAAAATGCGGCATGTGCAATAAGAAGAACGAAACAGTTGATCATGCGCTTTGTGGATGCAAGAGAGCAAAG
ATGATTTGTGACCACGTTTTTCCACGAGTAGATGATCATATCCCCGTGGAGAATAATTTTGCCGATCGCTTAATTCACCTTGCAAGGCAGCTGAAGGAAGCAGACTTCGA
AAAGGCTTGTATTGCGTTTTGGTCCGTATGGAACAATAGAAACACACGGCTTTTGGGCAGTCCGATTGTTGAATGGACACATCAGTGTGAGTGGGTTGTTAACTATTGGG
CAGAAATTTCAAGGGGGAAACAGGAGGTCGTGTCGGACCATACCCATTTGAATACATGTGCACTGGAAGCTGACGGGGCTGTTACTCTCTTTGCAGACGCGGCCGTCCTC
CCGACCTTAGATGGAGCTGGCCTAGGTGTCTTATTGGTTAATGAAGTCGGCAATATTTGTGGGGCAATGGAGATATATGAGAGTTCAGCTTTGTCTCCGTTCGCAGCGGA
AGTTCAGGCTATAATGCATGGACTAAGATTGACTGCACGCATGGAAATACAAAGAGTTCATGTGTACTCGGACTCTTTAAATGCAATTCGGATGATCAATGGAGAGATTG
GAGAGTGGCTGGAAGTTCGACACTGGATATCAGAACTTCATGATCTATGCAAAGGGTTCCTTTCAGTGTGTTTCTCTTATATCCCAAGGGATAAAAATAGGAAAGCAGAT
GCTCTAGCGAAGGATGCGTTAATGCACCAGCAAAATATGTTGTGGGTAGAAAATTTTCCGCTATGGCTATTATCAATGGGTAACCAATCCCACGATAAGAGTATTGTAAG
TTGTGTTCGTCTCTAA

mRNA sequence

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Protein sequence

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MKRFLPSDSSVEVEEEEEETEAKNRGGGSAHSVTALHSLLKKYEIASGQVINVEKSAMFFSPNVPAELRVSLKQIMGMPIVDNLGRYLGVPSSFSRNRKDDFKGVKQRVW
QTLQGWKGKFFSMGGKEVLIKSVAQAIPTFIMSCFRLPVTLCDDLHKMMAKFWWGSTEEKKKIHWKRWDFMCKPKELGGLNFRDLKVFNKALLAKQVWRIFTNPGLLVSK
VIHGRYAHNMSVLSAPVKSNCSVFWRGFVWARGLLSHGMRKQVGNGASIKFFQDPWIPKETSFKPLRIDMSNINDDPWVADFITPSKGWNVAKIENVVTKEDANVIAAIP
ISVVNEEDRWVWHYSKNGNYTVKSGYKQAIMATVDTVSTSSNYTKHWWGALWNSKLPTKIKVFIWKAFHECLPTAYSLWRRRMDVSPKCGMCNKKNETVDHALCGCKRAK
MICDHVFPRVDDHIPVENNFADRLIHLARQLKEADFEKACIAFWSVWNNRNTRLLGSPIVEWTHQCEWVVNYWAEISRGKQEVVSDHTHLNTCALEADGAVTLFADAAVL
PTLDGAGLGVLLVNEVGNICGAMEIYESSALSPFAAEVQAIMHGLRLTARMEIQRVHVYSDSLNAIRMINGEIGEWLEVRHWISELHDLCKGFLSVCFSYIPRDKNRKAD
ALAKDALMHQQNMLWVENFPLWLLSMGNQSHDKSIVSCVRL

Lag0004473 (gene) of Sponge gourd (AG-4) v1 genome