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Lag0004505 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004505
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionComplex 1 LYR protein
Genome locationchr6:4453844..4454323
RNA-Seq ExpressionLag0004505
SyntenyLag0004505
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016900070.1 PREDICTED: uncharacterized protein LOC103488569 [Cucumis melo]4.2e-6785.53Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        MTMRL+GK LNLS S+ KN L C+KI F+PRVLHNGPDT++ELLDRHVVKKEKS DD+ D+LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        DVLR+NARKEFE+AR+ESDPEIVTRLLIGGRDAVQSALDKLAEKQ +EI+KKQSGRDQL
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

XP_022144304.1 uncharacterized protein LOC111014019 [Momordica charantia]3.1e-7087.97Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        MT+RL+GKCLN  LS+HK+ LACNKI F+PRVLHNGPDTIDELLDRHVVKKEKS++DEDDELITQR LTSTRREALSLYRDI+RATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        DVLRENARKEFE ARYESDPE+VTRLLIGGRDAVQSALDKLAEKQMQEI+KKQ G DQ
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

XP_022961619.1 uncharacterized protein LOC111462339 [Cucurbita moschata]1.9e-6784.18Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        M+MRL+ KC  + LS HKN LACNK+ F+PR+LHNGPDTIDELLDRHVVKKEKS+DD+++ELITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        DVLR+NARKEFE+AR+E+DPEIVTRLLIGGRDAVQSALDKLAEKQ QEI+KKQSGRD+
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

XP_031736624.1 uncharacterized protein LOC101214249 [Cucumis sativus]2.9e-6885.53Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        MTMRL+GK LNLS S+HKN L C+KI F+PRVLHNGPDT++ELLDRHVVKKEK +DDEDD+LITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        DVLRENARKEFE+AR ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EI+KKQ GRDQL
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

XP_038884246.1 uncharacterized protein LOC120075144 [Benincasa hispida]1.1e-7088.54Show/hide
Query:  MRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWRDV
        MRL+GKCLN  LS+HKN L CNKI F+PRVLHNGPDT+ ELLDRHVVKKEKS+DDE+DELITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWRDV
Subjt:  MRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWRDV

Query:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        LR+NARKEFE+ARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEI+KKQ+GRDQL
Subjt:  LRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

TrEMBL top hitse value%identityAlignment
A0A0A0LMK5 Uncharacterized protein1.4e-6885.53Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        MTMRL+GK LNLS S+HKN L C+KI F+PRVLHNGPDT++ELLDRHVVKKEK +DDEDD+LITQRRLT+TRREALSLYRDILRATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        DVLRENARKEFE+AR ESDPE+VTRLLIGGRDAVQSALDKLAEKQ +EI+KKQ GRDQL
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

A0A1S4DWJ1 uncharacterized protein LOC1034885692.0e-6785.53Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        MTMRL+GK LNLS S+ KN L C+KI F+PRVLHNGPDT++ELLDRHVVKKEKS DD+ D+LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        DVLR+NARKEFE+AR+ESDPEIVTRLLIGGRDAVQSALDKLAEKQ +EI+KKQSGRDQL
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

A0A5A7VCD6 Complex 1 LYR protein2.0e-6785.53Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        MTMRL+GK LNLS S+ KN L C+KI F+PRVLHNGPDT++ELLDRHVVKKEKS DD+ D+LITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL
        DVLR+NARKEFE+AR+ESDPEIVTRLLIGGRDAVQSALDKLAEKQ +EI+KKQSGRDQL
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL

A0A6J1CRY1 uncharacterized protein LOC1110140191.5e-7087.97Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        MT+RL+GKCLN  LS+HK+ LACNKI F+PRVLHNGPDTIDELLDRHVVKKEKS++DEDDELITQR LTSTRREALSLYRDI+RATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        DVLRENARKEFE ARYESDPE+VTRLLIGGRDAVQSALDKLAEKQMQEI+KKQ G DQ
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

A0A6J1HEL0 uncharacterized protein LOC1114623399.0e-6884.18Show/hide
Query:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR
        M+MRL+ KC  + LS HKN LACNK+ F+PR+LHNGPDTIDELLDRHVVKKEKS+DD+++ELITQRRLTSTRREALSLYRDILRATRFFMWPDS+GVLWR
Subjt:  MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWR

Query:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ
        DVLR+NARKEFE+AR+E+DPEIVTRLLIGGRDAVQSALDKLAEKQ QEI+KKQSGRD+
Subjt:  DVLRENARKEFENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76060.1 LYR family of Fe/S cluster biogenesis protein1.6e-4572.22Show/hide
Query:  RVLHNGPDTIDELLDRHVVKKEKSYDDEDD-ELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWRDVLRENARKEFENARYESDPEIVTRLLIG
        R LH GPDT++ELL+RH+ KKEK   D D+ E + +RRLTSTRREALSLYRDILRATRFF W DS+G LWRDVLRENARKEFE AR+E+DPE++TRLLIG
Subjt:  RVLHNGPDTIDELLDRHVVKKEKSYDDEDD-ELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWRDVLRENARKEFENARYESDPEIVTRLLIG

Query:  GRDAVQSALDKLAEKQMQEINKKQSG
        G DAV SALDKLAEKQ + I K++ G
Subjt:  GRDAVQSALDKLAEKQMQEINKKQSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGAGGCTGCTGGGAAAATGTTTAAACCTGTCACTGTCAGTTCATAAGAATTCTCTGGCTTGCAATAAAATTGTTTTCTACCCTCGAGTTTTGCATAATGGTCC
AGACACAATAGATGAACTTTTAGATAGACACGTGGTTAAGAAAGAAAAGTCCTATGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACTCGACGTG
AGGCTCTAAGTCTCTACCGAGACATTCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTCTCAAGGTGTCTTGTGGCGGGATGTTCTCAGGGAGAATGCCCGGAAGGAA
TTTGAGAATGCTCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAGTCGGCTCTCGACAAGCTTGCTGAGAAGCAAATGCA
GGAGATTAATAAGAAACAAAGTGGTCGAGATCAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCATGAGGCTGCTGGGAAAATGTTTAAACCTGTCACTGTCAGTTCATAAGAATTCTCTGGCTTGCAATAAAATTGTTTTCTACCCTCGAGTTTTGCATAATGGTCC
AGACACAATAGATGAACTTTTAGATAGACACGTGGTTAAGAAAGAAAAGTCCTATGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACTCGACGTG
AGGCTCTAAGTCTCTACCGAGACATTCTCCGTGCAACTCGATTCTTTATGTGGCCAGATTCTCAAGGTGTCTTGTGGCGGGATGTTCTCAGGGAGAATGCCCGGAAGGAA
TTTGAGAATGCTCGCTATGAGTCTGATCCAGAAATTGTGACCCGACTTCTCATTGGTGGGCGCGATGCAGTGCAGTCGGCTCTCGACAAGCTTGCTGAGAAGCAAATGCA
GGAGATTAATAAGAAACAAAGTGGTCGAGATCAACTCTGA
Protein sequenceShow/hide protein sequence
MTMRLLGKCLNLSLSVHKNSLACNKIVFYPRVLHNGPDTIDELLDRHVVKKEKSYDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWPDSQGVLWRDVLRENARKE
FENARYESDPEIVTRLLIGGRDAVQSALDKLAEKQMQEINKKQSGRDQL