; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004507 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004507
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr6:4461972..4463809
RNA-Seq ExpressionLag0004507
SyntenyLag0004507
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033326.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.4e-1526.12Show/hide
Query:  LLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADHFM
        L  V  +  GRW E++RY  ++  +V VP   + Q+   CI+ ++FP+ E  ++ LT+Y NG N +N+IRI DD+ V+W+M  +     +D+ VV D   
Subjt:  LLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADHFM

Query:  TRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEK--------------------------
          Y    N+  T    S E   A        +I+ N + + +     L    I         + L F + L+ +                          
Subjt:  TRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEK--------------------------

Query:  --NPVMTRYGGG---------GNLHFTAIRGSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY
          N +   +G             +   +I G+PE SY ++  FS A I  NPG Y A   D+EG+F++
Subjt:  --NPVMTRYGGG---------GNLHFTAIRGSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY

KAA0038035.1 uncharacterized protein E6C27_scaffold36G002340 [Cucumis melo var. makuwa]2.4e-2030.67Show/hide
Query:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH
        + L  V  +F GRW E++RY  +    V VP   + QEF  CI+ ++FP+ E  ++RLT+Y    N +N+I+I +D+D +W+M  I     +D+ +V D 
Subjt:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH

Query:  F-MTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLH----FTAIR
           T  G    L     R     S  +I+  +        +  R G      F  I    +A Y L L  S  L+      T +     +     +    
Subjt:  F-MTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLH----FTAIR

Query:  GSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY
        G+PE  YA++  FS ALI  NPG YTA + D+EG+F++
Subjt:  GSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY

KAA0054157.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.0e-1533.88Show/hide
Query:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDV--TWVMSNIGDG--MASDICV
        +GL  V  +F GRW E++RY  ++   V VP     QEF  CI+ ++FP+ E  ++RLT+Y    N +N+IRI DD+DV  T   ++IG+   ++S++  
Subjt:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDV--TWVMSNIGDG--MASDICV

Query:  VADHFMTRYGGGGNLHFTAIRGSPEASYALILVFSVALI--EKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKN
          D     +   G +   A   S   S +   V +   I  E N    +   G  +   +IRG+PE SYA++  FS ALI  N
Subjt:  VADHFMTRYGGGGNLHFTAIRGSPEASYALILVFSVALI--EKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKN

KAA0066503.1 uncharacterized protein E6C27_scaffold25G00500 [Cucumis melo var. makuwa]1.5e-1435.97Show/hide
Query:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH
        + L  V  +F GRW E+ RY  ++   V VP   + QEF  CI  ++FP+ E  ++RLT+Y    N   +IRI DD+DV+W+M  I     +D+ +V D 
Subjt:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH

Query:  FMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNP
              G          G+ E SYA++  F  ALI  NP
Subjt:  FMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNP

XP_038887125.1 uncharacterized protein LOC120077310 [Benincasa hispida]4.5e-1928.17Show/hide
Query:  LLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADHFM
        L  V +LF+GRWDEN++Y+ F+     +P   + Q+F E I+ K+FPS E  I+RL MY  G + +N+I I +D+ + W+M  + D    D+CVV DH  
Subjt:  LLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADHFM

Query:  --------TRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRY-----------
                T Y    + +       P  +  ++      + +   +  R G    L F++     +A Y L L  S  L       T +           
Subjt:  --------TRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRY-----------

Query:  --------GGG--------------------GNLHFTA------IRGSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY
                GGG                    G+   T+       +G+ E+SY  +  FS ALIE NPG YT  + D+EG+F+Y
Subjt:  --------GGG--------------------GNLHFTA------IRGSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY

TrEMBL top hitse value%identityAlignment
A0A5A7UHW9 Protein FAR1-RELATED SEQUENCE 4-like5.0e-1633.88Show/hide
Query:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDV--TWVMSNIGDG--MASDICV
        +GL  V  +F GRW E++RY  ++   V VP     QEF  CI+ ++FP+ E  ++RLT+Y    N +N+IRI DD+DV  T   ++IG+   ++S++  
Subjt:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDV--TWVMSNIGDG--MASDICV

Query:  VADHFMTRYGGGGNLHFTAIRGSPEASYALILVFSVALI--EKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKN
          D     +   G +   A   S   S +   V +   I  E N    +   G  +   +IRG+PE SYA++  FS ALI  N
Subjt:  VADHFMTRYGGGGNLHFTAIRGSPEASYALILVFSVALI--EKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKN

A0A5A7VEN5 Uncharacterized protein7.2e-1535.97Show/hide
Query:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH
        + L  V  +F GRW E+ RY  ++   V VP   + QEF  CI  ++FP+ E  ++RLT+Y    N   +IRI DD+DV+W+M  I     +D+ +V D 
Subjt:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH

Query:  FMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNP
              G          G+ E SYA++  F  ALI  NP
Subjt:  FMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNP

A0A5D3CUZ6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like9.5e-1531.44Show/hide
Query:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH
        + L  V  +F GRW E+ RY  ++   V VP   + QEF  CI+ ++FP+ E  ++RLT+Y    N +N+IRI DD+DV+W+M  I     +D+ VV + 
Subjt:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH

Query:  FMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNP-----------------VMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKN
                  +  T I  +P  S  L      + IE  P                 V  +   G  +   +IRG+ E SYA++  F  ALI  N
Subjt:  FMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNP-----------------VMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKN

A0A5D3DAG3 ZnF_PMZ domain-containing protein1.2e-2030.67Show/hide
Query:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH
        + L  V  +F GRW E++RY  +    V VP   + QEF  CI+ ++FP+ E  ++RLT+Y    N +N+I+I +D+D +W+M  I     +D+ +V D 
Subjt:  VGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADH

Query:  F-MTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLH----FTAIR
           T  G    L     R     S  +I+  +        +  R G      F  I    +A Y L L  S  L+      T +     +     +    
Subjt:  F-MTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLH----FTAIR

Query:  GSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY
        G+PE  YA++  FS ALI  NPG YTA + D+EG+F++
Subjt:  GSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY

A0A5D3DDR3 MuDRA-like transposase6.6e-1626.12Show/hide
Query:  LLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADHFM
        L  V  +  GRW E++RY  ++  +V VP   + Q+   CI+ ++FP+ E  ++ LT+Y NG N +N+IRI DD+ V+W+M  +     +D+ VV D   
Subjt:  LLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRITDDRDVTWVMSNIGDGMASDICVVADHFM

Query:  TRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEK--------------------------
          Y    N+  T    S E   A        +I+ N + + +     L    I         + L F + L+ +                          
Subjt:  TRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEK--------------------------

Query:  --NPVMTRYGGG---------GNLHFTAIRGSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY
          N +   +G             +   +I G+PE SY ++  FS A I  NPG Y A   D+EG+F++
Subjt:  --NPVMTRYGGG---------GNLHFTAIRGSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACACGTGAGGTGTTGCATCTTCGGTTTACAGAGGCTGCACACTGTATGCTCAATATACAGCAGGTATTTTCAGGGTTTCAGATGCAGATGCACTCCATGCCGCC
AGTTGGTTTGCTGAATGTTGTGGTTCTATTCAGTGGGAGGTGGGATGAAAACAATCGGTACAATGGGTTTAAGTCCGACAGTGTGCCAGTACCGGAGGGATGCACAATAC
AAGAGTTCAATGAATGTATCCGAAGCAAGGTATTTCCATCGGACGAGCACATGATCACTCGGTTAACCATGTACAGGAATGGTATCAACAAGGCTAATATAATCCGGATC
ACTGACGACAGGGATGTTACTTGGGTCATGTCCAACATTGGCGATGGGATGGCTAGTGACATATGCGTTGTGGCTGACCACTTTATGACAAGGTATGGAGGGGGCGGAAA
CTTGCACTTTACTGCCATCAGAGGGTCACCCGAAGCGTCGTATGCACTAATCCTTGTTTTCTCTGTTGCCCTGATCGAGAAAAACCCAGTTATGACAAGGTATGGAGGGG
GCGGAAACTTGCACTTTACTGCCATCAGAGGGTCACCCGAAGCGTCGTATGCACTAATCCTTGTTTTCTCTGTTGCCCTGATCGAGAAAAACCCAGTTATGACAAGGTAT
GGAGGGGGCGGAAACTTGCACTTTACTGCCATCAGAGGGTCACCCGAAGCGTCGTATGCACTAATCCTTGTTTTCTCTGTTGCCCTGATCGAGAAAAACCCAGGTGCATA
CACTGCTTTTGATGTTGACAATGAGGGCAAGTTCAGGTATGTGGGGGGTTGTTTAATTTTCGTGTATTTCAAGTTAGAGGAGTGTTGGGAAGACAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACACGTGAGGTGTTGCATCTTCGGTTTACAGAGGCTGCACACTGTATGCTCAATATACAGCAGGTATTTTCAGGGTTTCAGATGCAGATGCACTCCATGCCGCC
AGTTGGTTTGCTGAATGTTGTGGTTCTATTCAGTGGGAGGTGGGATGAAAACAATCGGTACAATGGGTTTAAGTCCGACAGTGTGCCAGTACCGGAGGGATGCACAATAC
AAGAGTTCAATGAATGTATCCGAAGCAAGGTATTTCCATCGGACGAGCACATGATCACTCGGTTAACCATGTACAGGAATGGTATCAACAAGGCTAATATAATCCGGATC
ACTGACGACAGGGATGTTACTTGGGTCATGTCCAACATTGGCGATGGGATGGCTAGTGACATATGCGTTGTGGCTGACCACTTTATGACAAGGTATGGAGGGGGCGGAAA
CTTGCACTTTACTGCCATCAGAGGGTCACCCGAAGCGTCGTATGCACTAATCCTTGTTTTCTCTGTTGCCCTGATCGAGAAAAACCCAGTTATGACAAGGTATGGAGGGG
GCGGAAACTTGCACTTTACTGCCATCAGAGGGTCACCCGAAGCGTCGTATGCACTAATCCTTGTTTTCTCTGTTGCCCTGATCGAGAAAAACCCAGTTATGACAAGGTAT
GGAGGGGGCGGAAACTTGCACTTTACTGCCATCAGAGGGTCACCCGAAGCGTCGTATGCACTAATCCTTGTTTTCTCTGTTGCCCTGATCGAGAAAAACCCAGGTGCATA
CACTGCTTTTGATGTTGACAATGAGGGCAAGTTCAGGTATGTGGGGGGTTGTTTAATTTTCGTGTATTTCAAGTTAGAGGAGTGTTGGGAAGACAAATAG
Protein sequenceShow/hide protein sequence
MATREVLHLRFTEAAHCMLNIQQVFSGFQMQMHSMPPVGLLNVVVLFSGRWDENNRYNGFKSDSVPVPEGCTIQEFNECIRSKVFPSDEHMITRLTMYRNGINKANIIRI
TDDRDVTWVMSNIGDGMASDICVVADHFMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRYGGGGNLHFTAIRGSPEASYALILVFSVALIEKNPVMTRY
GGGGNLHFTAIRGSPEASYALILVFSVALIEKNPGAYTAFDVDNEGKFRYVGGCLIFVYFKLEECWEDK