; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004571 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004571
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr6:5086838..5087662
RNA-Seq ExpressionLag0004571
SyntenyLag0004571
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064893.1 putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]2.2e-14892.7Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNI  D+FASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPVVYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

XP_008445259.1 PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]2.2e-14892.7Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNI  D+FASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPVVYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

XP_022132176.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]2.8e-14891.97Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKG+SI IREVW+ NLEEEFAL+REIVD+FNYIAMDTEFPGVVLRP+GAFKNIN+YNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISED+FASDSIELLRQCGIDFKKNNEEGIDVNRF ELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCRSLP++QAGFFDLIN+YFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNS HGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ  N
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

XP_022132308.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]3.2e-15294.89Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFN+SED+FASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR+LP++QAGFFDLINIYFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAGVLYGLGVE+GQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

XP_038885551.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]1.2e-14993.43Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND+NY+TLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNI  D+FASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLN+ VNWVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPVVYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGV+NGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

TrEMBL top hitse value%identityAlignment
A0A0A0LMH2 Poly(A)-specific ribonuclease2.3e-14892.34Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNI  D+FASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPV+YDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

A0A1S3BD45 Poly(A)-specific ribonuclease1.1e-14892.7Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNI  D+FASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPVVYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

A0A5A7V9Q6 Poly(A)-specific ribonuclease1.1e-14892.7Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNI  D+FASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP  QAGFF+LIN+YFPVVYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

A0A6J1BRI8 Poly(A)-specific ribonuclease1.4e-14891.97Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKG+SI IREVW+ NLEEEFAL+REIVD+FNYIAMDTEFPGVVLRP+GAFKNIN+YNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFNISED+FASDSIELLRQCGIDFKKNNEEGIDVNRF ELLMSSG+VLND VNWVTFHSGYDFGYLLKLLTCRSLP++QAGFFDLIN+YFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNS HGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ  N
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

A0A6J1BVW9 Poly(A)-specific ribonuclease1.6e-15294.89Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MSILPKGDSIQIREVWN NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREFN+SED+FASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR+LP++QAGFFDLINIYFP+VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN
        KHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAGVLYGLGVE+GQRTN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 72.8e-8256.13Show/hide
Query:  SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNI
        S +I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  DY YQ L+ NVD+LK+IQLGLTF +E+G  P  GT     WQFNF+ FN+
Subjt:  SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNI

Query:  SEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMKFCN
        +ED++A DSIELL   GI FKK+ EEGI+   F ELLM+SGVVL + V W++FHSGYDFGYL+K+LT  +LPE +  FF+++ ++FPV+YD+K+LMK C 
Subjt:  SEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMKFCN

Query:  SLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLG-----VENG
        +L GGL ++AE L++ERIG  HQAGSDSLLT   F K+R+ FF       KY G LYGLG     V+NG
Subjt:  SLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNG--STQKYAGVLYGLG-----VENG

Q9LEU4 Probable CCR4-associated factor 1 homolog 103.6e-12275.75Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TLK+NVD+LKLIQ+GLTFSDE GNLPTCGTDKF IWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFRE

Query:  FNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMK
        FNI ED++AS+SIELLRQCGIDFKKN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMK

Query:  FCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+G  T
Subjt:  FCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRT

Q9S9P2 Probable CCR4-associated factor 1 homolog 28.2e-9864.77Show/hide
Query:  DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQF
        D+I+IREVWN NLE+E ALI + +D+F Y+AMDTEFPG+V + + A  N N      +YNY TLK NV+MLKLIQLGLT SDEKGNLPTCGT+K  IWQF
Subjt:  DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQF

Query:  NFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIK
        NFREFN+  D+FA DSIELLR+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LPE  + FFD +  +FPVVYDIK
Subjt:  NFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIK

Query:  HLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+G L+GL
Subjt:  HLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 69.6e-12374.17Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREF++  D+FA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP+SQ  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.7e-12576.1Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIW
        MS+  K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y+Y+TLK NV++LK+IQLGLTFSDEKGNLPTCGTD K+ IW
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIW

Query:  QFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYD
        QFNFREF++  D++A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LPE+Q GFF++I++YFP VYD
Subjt:  QFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYD

Query:  IKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        IKHLMKFCNSLHGGLNKLAELLDVER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVENGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.8e-12474.17Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREF++  D+FA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP+SQ  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.8e-12474.17Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREF++  D+FA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP+SQ  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        KHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVENGQ
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.8e-12373.98Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ
        MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQ
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQ

Query:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI
        FNFREF++  D+FA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP+SQ  FF LIN+YFP VYDI
Subjt:  FNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDI

Query:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVEN
        KHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVEN
Subjt:  KHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVEN

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-12676.1Show/hide
Query:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIW
        MS+  K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y+Y+TLK NV++LK+IQLGLTFSDEKGNLPTCGTD K+ IW
Subjt:  MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIW

Query:  QFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYD
        QFNFREF++  D++A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LPE+Q GFF++I++YFP VYD
Subjt:  QFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYD

Query:  IKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ
        IKHLMKFCNSLHGGLNKLAELLDVER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVENGQ
Subjt:  IKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-12375.75Show/hide
Query:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFRE
        K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TLK+NVD+LKLIQ+GLTFSDE GNLPTCGTDKF IWQFNFRE
Subjt:  KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFRE

Query:  FNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMK
        FNI ED++AS+SIELLRQCGIDFKKN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMK

Query:  FCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRT
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE+G  T
Subjt:  FCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTGTGGAACGCGAATTTGGAGGAGGAGTTTGCGCTTATCCGGGAAATTGTTGATGAATTTAATTACAT
AGCGATGGATACCGAGTTCCCCGGAGTGGTGCTTCGTCCGCTTGGTGCTTTTAAGAATATCAACGATTACAACTACCAGACTCTCAAGGATAATGTTGATATGTTGAAGT
TGATTCAATTGGGTCTTACGTTCTCTGATGAGAAGGGGAATCTCCCGACTTGTGGAACGGATAAGTTTTTTATTTGGCAGTTTAATTTCCGCGAGTTCAACATTAGTGAA
GATGTTTTTGCCAGTGATTCCATTGAGCTTCTGCGCCAGTGTGGTATTGATTTCAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTAAACGATTGTGTTAACTGGGTGACATTCCACAGTGGATATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAAGCTTACCAGAATCGCAGG
CCGGATTTTTTGATTTGATCAACATCTATTTTCCTGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGATTGAACAAGCTTGCGGAGTTA
TTAGATGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACTTTTTTCAATGGATCTACACAGAA
ATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTGTGGAACGCGAATTTGGAGGAGGAGTTTGCGCTTATCCGGGAAATTGTTGATGAATTTAATTACAT
AGCGATGGATACCGAGTTCCCCGGAGTGGTGCTTCGTCCGCTTGGTGCTTTTAAGAATATCAACGATTACAACTACCAGACTCTCAAGGATAATGTTGATATGTTGAAGT
TGATTCAATTGGGTCTTACGTTCTCTGATGAGAAGGGGAATCTCCCGACTTGTGGAACGGATAAGTTTTTTATTTGGCAGTTTAATTTCCGCGAGTTCAACATTAGTGAA
GATGTTTTTGCCAGTGATTCCATTGAGCTTCTGCGCCAGTGTGGTATTGATTTCAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTAAACGATTGTGTTAACTGGGTGACATTCCACAGTGGATATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAAGCTTACCAGAATCGCAGG
CCGGATTTTTTGATTTGATCAACATCTATTTTCCTGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGATTGAACAAGCTTGCGGAGTTA
TTAGATGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACTTTTTTCAATGGATCTACACAGAA
ATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGA
Protein sequenceShow/hide protein sequence
MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISE
DVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDCVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAEL
LDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN