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Lag0004596 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004596
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionATP synthase subunit b
Genome locationchr6:5336079..5336444
RNA-Seq ExpressionLag0004596
SyntenyLag0004596
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0009536 - plastid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsIPR002146 - ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445233.1 PREDICTED: ATP synthase subunit b', chloroplastic [Cucumis melo]2.8e-4794.21Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV LDKIYFSPLGKFMDERDAAIKEKLSSVKDTSE VKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRK+IDAELQEALANLE+QK ETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

XP_022951454.1 ATP synthase subunit b', chloroplastic [Cucurbita moschata]9.6e-4894.21Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV LDK+YFSPLGKFMDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QKVETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

XP_023002493.1 ATP synthase subunit b', chloroplastic [Cucurbita maxima]9.6e-4894.21Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV LDK+YFSPLGKFMDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QKVETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

XP_023538440.1 ATP synthase subunit b', chloroplastic [Cucurbita pepo subsp. pepo]9.6e-4894.21Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV LDK+YFSPLGKFMDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QKVETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

XP_038886736.1 ATP synthase subunit b', chloroplastic [Benincasa hispida]3.0e-4996.69Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MVALDKIYFSPLGKFMDERD+AIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLE+QKVETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

TrEMBL top hitse value%identityAlignment
A0A1S3BD20 ATP synthase subunit b', chloroplastic1.3e-4794.21Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV LDKIYFSPLGKFMDERDAAIKEKLSSVKDTSE VKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRK+IDAELQEALANLE+QK ETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

A0A5A7VF07 ATP synthase subunit b1.3e-4794.21Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV LDKIYFSPLGKFMDERDAAIKEKLSSVKDTSE VKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRK+IDAELQEALANLE+QK ETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

A0A6J1BQZ6 ATP synthase subunit b', chloroplastic2.3e-4793.39Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MVALDKIYFSPLGKFMD+RDAAIKEKL+SVKDTS EVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVE+KLAEGRK+IDAELQEALANLE+QK ETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

A0A6J1GIS7 ATP synthase subunit b', chloroplastic4.6e-4894.21Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV LDK+YFSPLGKFMDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QKVETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

A0A6J1KTQ2 ATP synthase subunit b', chloroplastic4.6e-4894.21Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV LDK+YFSPLGKFMDERDAAIKEKL+SVKDTSEEVKQLDEQAAAVMRAARAEISAAL KMKKETQAEVEEKLAEGRKKIDAELQEALA+LE+QKVETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LDAQIAALSDEIVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

SwissProt top hitse value%identityAlignment
A8J785 ATP synthase subunit b', chloroplastic3.1e-1740Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        MV L+K +F+P+GK +DERD  I+ KL SVKD + +V +L  +A  ++++AR+++SA +   K   Q+E+++   E + KI AE++ ++A LE +    +
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLP
        K+LDAQ+  +S E++K+VLP
Subjt:  KALDAQIAALSDEIVKKVLP

P31853 ATP synthase subunit b', chloroplastic2.4e-4179.34Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        M ALDKIY++PLG FMD+RDA+IKE+LS VKDTS EVKQL+EQA AVMRAARAEISAAL KMKKETQ EVE KLAEGRKKI+ ELQEAL +LE QK +TI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+LD+QI+ALSD+IVKKVLPV
Subjt:  KALDAQIAALSDEIVKKVLPV

P48085 ATP synthase B' chain, cyanelle1.3e-0732.23Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        M+ L+ +++ PL K +DER   I+   +  +    +  +L  Q    +  AR   S      + E Q  V EKL E +KK D+EL  A   LE QK E +
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLPV
        K+L++++  LS +I++K+L +
Subjt:  KALDAQIAALSDEIVKKVLPV

Q05367 ATP synthase subunit b'2.9e-0728.81Show/hide
Query:  VALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETIK
        V L+ + + PLG+ +D RD  I+  L   K+  ++  +L  Q    +   R E  A + + + E Q     ++A  ++ + AEL +A A ++ QK  T++
Subjt:  VALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETIK

Query:  ALDAQIAALSDEIVKKVL
        AL+ Q+++LS++++ K+L
Subjt:  ALDAQIAALSDEIVKKVL

Q8DLP6 ATP synthase subunit b'1.7e-0727.97Show/hide
Query:  VALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETIK
        V L+ + + PLG+ +D RD  I+  L   K+  ++  +L +Q    + + R +  A + + + E Q     ++AE ++ + AEL +  A ++ QK  T++
Subjt:  VALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETIK

Query:  ALDAQIAALSDEIVKKVL
        AL+ Q+A+LS++++ K++
Subjt:  ALDAQIAALSDEIVKKVL

Arabidopsis top hitse value%identityAlignment
AT4G32260.1 ATPase, F0 complex, subunit B/B', bacterial/chloroplast3.6e-4582.5Show/hide
Query:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI
        M ALDK+Y+SPLG FMD+RDA+IKEKL+SVKDTS EVK+LDEQAAAVMRAARAEI+AAL KMKKETQ EVEEKLAEGRKK++ EL+EALA+LESQK ETI
Subjt:  MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETI

Query:  KALDAQIAALSDEIVKKVLP
        KALD+QIAALS++IVKKVLP
Subjt:  KALDAQIAALSDEIVKKVLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGCTCTCGACAAAATCTACTTCTCCCCTCTCGGCAAGTTCATGGACGAGAGGGACGCCGCCATTAAGGAGAAGCTCAGCAGCGTCAAAGACACCTCCGAGGAGGT
CAAGCAGCTGGATGAACAGGCTGCGGCGGTGATGAGGGCGGCCAGAGCGGAGATTTCGGCGGCTCTTACGAAGATGAAGAAGGAAACTCAGGCGGAGGTGGAGGAGAAAC
TGGCGGAGGGGAGGAAGAAGATTGATGCGGAGTTGCAGGAGGCGTTGGCCAACTTGGAGAGTCAGAAGGTGGAGACCATTAAAGCCCTCGATGCTCAAATTGCGGCTCTT
AGTGACGAGATCGTCAAGAAGGTTCTTCCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGCTCTCGACAAAATCTACTTCTCCCCTCTCGGCAAGTTCATGGACGAGAGGGACGCCGCCATTAAGGAGAAGCTCAGCAGCGTCAAAGACACCTCCGAGGAGGT
CAAGCAGCTGGATGAACAGGCTGCGGCGGTGATGAGGGCGGCCAGAGCGGAGATTTCGGCGGCTCTTACGAAGATGAAGAAGGAAACTCAGGCGGAGGTGGAGGAGAAAC
TGGCGGAGGGGAGGAAGAAGATTGATGCGGAGTTGCAGGAGGCGTTGGCCAACTTGGAGAGTCAGAAGGTGGAGACCATTAAAGCCCTCGATGCTCAAATTGCGGCTCTT
AGTGACGAGATCGTCAAGAAGGTTCTTCCTGTTTAG
Protein sequenceShow/hide protein sequence
MVALDKIYFSPLGKFMDERDAAIKEKLSSVKDTSEEVKQLDEQAAAVMRAARAEISAALTKMKKETQAEVEEKLAEGRKKIDAELQEALANLESQKVETIKALDAQIAAL
SDEIVKKVLPV