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Lag0004614 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004614
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionleucine-rich repeat extensin-like protein 6
Genome locationchr6:5456797..5458774
RNA-Seq ExpressionLag0004614
SyntenyLag0004614
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582324.1 Leucine-rich repeat extensin-like protein 6, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0476.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS LSNMN TLNEIIIT+SGL GCL  EIGSLSNL +
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
KAG7018733.1 Leucine-rich repeat extensin-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-0476.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS LSNMN TLNEIIIT+SGL GCL  EIGSLSNL +
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
XP_004134434.2 leucine-rich repeat extensin-like protein 6 [Cucumis sativus]8.4e-0576.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS +SNMN TLNEIIIT SGL GCL  EIGSLSNLT+
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
XP_008438627.1 PREDICTED: leucine-rich repeat extensin-like protein 6 [Cucumis melo]1.4e-0476.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS +SNMN TLNEIIITSSGL GCL  EIGSL NLT+
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
XP_022955983.1 leucine-rich repeat extensin-like protein 6 [Cucurbita moschata]1.1e-0476.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS LSNMN TLNEIIIT+SGL GCL  EIGSLSNL +
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
TrEMBL top hitse value%identityAlignment
A0A0A0L7E3 LRRNT_2 domain-containing protein4.0e-0576.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS +SNMN TLNEIIIT SGL GCL  EIGSLSNLT+
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
A0A1S3AWH7 leucine-rich repeat extensin-like protein 66.9e-0576.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS +SNMN TLNEIIITSSGL GCL  EIGSL NLT+
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
A0A5D3D082 Leucine-rich repeat extensin-like protein 66.9e-0576.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS +SNMN TLNEIIITSSGL GCL  EIGSL NLT+
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
A0A6J1GVI2 leucine-rich repeat extensin-like protein 65.3e-0576.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS LSNMN TLNEIIIT+SGL GCL  EIGSLSNL +
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
A0A6J1IA76 leucine-rich repeat extensin-like protein 69.0e-0576.32Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +PS LSNMN TL EIIIT+SGL GCL  EIGSLSNLT+
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12040.1 leucine-rich repeat/extensin 17.5e-0444.74Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +P  +  M KTLNE+I+++  LTGCL  +IG+L  +T+
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
AT1G62440.1 leucine-rich repeat/extensin 22.0e-0450Show/hide
Query:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI
        +P  +  M KTLNEII+++  LTGCL  +IG+L N+T+
Subjt:  VPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCAAATTCTCATTGCCGAAAAACATCGACAATTCCCTTGTTTCTGTTCTGGTTTTTGCTAATAACAACATCAATGGCTGCCGTCCCCTCGATTTTATCCAATAT
GAACAAAACACTCAATGAAATTATAATCACGAGCAGTGGGTTGACTGGGTGTTTGTCGTTGGAAATTGGGTCGTTGAGCAATCTCACCATCAAAGGGGAGGAGCTTCGGC
GACGGGGAGAAAAAGAAGAGAGAGAAGAAACTGATTCGAAACATGAGGGACCAAAAAGAATTCGAAACCCTCTTCTCCTTGAACAAGTACCTTTAGCTATCAAACGCTCC
ACTATTTATTCTCTTCTCTTCGCTGCACTCTCTTTTTTCTCTGAGGGAAATCCACCGTCAAAGGTTACACTAGAAACTACATCTGAAGGGAAGAAGAATAAGGTGAAAGA
AGGCATTGACGACCACGAGCACAACCACGACAGATTGGCAGAAGAATCTGATGTTAAAGTCATGATCGATCGTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCAAATTCTCATTGCCGAAAAACATCGACAATTCCCTTGTTTCTGTTCTGGTTTTTGCTAATAACAACATCAATGGCTGCCGTCCCCTCGATTTTATCCAATAT
GAACAAAACACTCAATGAAATTATAATCACGAGCAGTGGGTTGACTGGGTGTTTGTCGTTGGAAATTGGGTCGTTGAGCAATCTCACCATCAAAGGGGAGGAGCTTCGGC
GACGGGGAGAAAAAGAAGAGAGAGAAGAAACTGATTCGAAACATGAGGGACCAAAAAGAATTCGAAACCCTCTTCTCCTTGAACAAGTACCTTTAGCTATCAAACGCTCC
ACTATTTATTCTCTTCTCTTCGCTGCACTCTCTTTTTTCTCTGAGGGAAATCCACCGTCAAAGGTTACACTAGAAACTACATCTGAAGGGAAGAAGAATAAGGTGAAAGA
AGGCATTGACGACCACGAGCACAACCACGACAGATTGGCAGAAGAATCTGATGTTAAAGTCATGATCGATCGTCATTGA
Protein sequenceShow/hide protein sequence
MISNSHCRKTSTIPLFLFWFLLITTSMAAVPSILSNMNKTLNEIIITSSGLTGCLSLEIGSLSNLTIKGEELRRRGEKEEREETDSKHEGPKRIRNPLLLEQVPLAIKRS
TIYSLLFAALSFFSEGNPPSKVTLETTSEGKKNKVKEGIDDHEHNHDRLAEESDVKVMIDRH