; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004615 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004615
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPhenylalanine--tRNA ligase beta subunit
Genome locationchr6:5458833..5459363
RNA-Seq ExpressionLag0004615
SyntenyLag0004615
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7403051.1 unnamed protein product [Spirodela intermedia]1.4e-1846.43Show/hide
Query:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE
        +E VES+VEE ER E  ++ GEL GE +VA IEL+EE +  + V D A EA+ VD EQ +V Q+AE++ +   +V VVE+  GD  DV V+   GAE   
Subjt:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE

Query:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWEE
        V+AD G+ P+  ++ ++G D + P LES+VG  E R+WEE
Subjt:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWEE

GER40383.1 phenylalanine--tRNA ligase beta subunit [Striga asiatica]1.1e-1551.75Show/hide
Query:  EVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVEVVADIGAIPIDVEVGQVGGDDVFPN
        E +VA++EL E  E  EG+G  A EA+GV+ E G+V++EAE+VG+ A EV VVEV+ GDG   GVVGGG AED  V A +GA P   EV  VG D V   
Subjt:  EVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVEVVADIGAIPIDVEVGQVGGDDVFPN

Query:  LESSVGLEEPRIWE
        LE +VG+ E  ++E
Subjt:  LESSVGLEEPRIWE

KAE8800028.1 hypothetical protein D1007_24504 [Hordeum vulgare]7.0e-1545.33Show/hide
Query:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE
        +E VE  VE  ER +    R E  GE +VAD+EL EE+    G    AVE +GV+ E  +V +EAEVVG+ A +  VVEVD  DGED  VV  GG E   
Subjt:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE

Query:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWEEWRWRRWRWHR
        VVA  GA P+  +V  V GD V P LE  VG  E  +    R  R R  R
Subjt:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWEEWRWRRWRWHR

KAF7806888.1 nuclear pore complex protein Nup107 [Senna tora]5.9e-2253.24Show/hide
Query:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKV-DQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDV
        +E VES VEE E  E  +  GE  GE +VA++EL EE+EA EG G+G  EA+GV+ E+G+V ++E EV G+GA E G VEVD GD  + GVV G GAE  
Subjt:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKV-DQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDV

Query:  EVVADIGAIPIDVEVGQVGGDD-VFPNLESSVGLEEPRI
         V AD+G  P+  EVG VGGD  V P LE  VGL+E R+
Subjt:  EVVADIGAIPIDVEVGQVGGDD-VFPNLESSVGLEEPRI

THU70574.1 hypothetical protein C4D60_Mb08t26420 [Musa balbisiana]4.5e-2252.52Show/hide
Query:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE
        +E VE+ VE  E  E  +   E  GE IVADIEL EE EA EG G+GA EAIGVD E+G+V +EAE+VG+ A EV VVE++ GD  +VGV   GGA+D  
Subjt:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE

Query:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWE
        VVAD GA P+  EV  +G D   P LE +VG+ E  + E
Subjt:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWE

TrEMBL top hitse value%identityAlignment
A0A4S8K6N4 Uncharacterized protein2.2e-2252.52Show/hide
Query:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE
        +E VE+ VE  E  E  +   E  GE IVADIEL EE EA EG G+GA EAIGVD E+G+V +EAE+VG+ A EV VVE++ GD  +VGV   GGA+D  
Subjt:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE

Query:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWE
        VVAD GA P+  EV  +G D   P LE +VG+ E  + E
Subjt:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWE

A0A5A7Q571 Phenylalanine--tRNA ligase beta subunit5.2e-1651.75Show/hide
Query:  EVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVEVVADIGAIPIDVEVGQVGGDDVFPN
        E +VA++EL E  E  EG+G  A EA+GV+ E G+V++EAE+VG+ A EV VVEV+ GDG   GVVGGG AED  V A +GA P   EV  VG D V   
Subjt:  EVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVEVVADIGAIPIDVEVGQVGGDDVFPN

Query:  LESSVGLEEPRIWE
        LE +VG+ E  ++E
Subjt:  LESSVGLEEPRIWE

A0A7I8KZC1 Hypothetical protein6.6e-1946.43Show/hide
Query:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE
        +E VES+VEE ER E  ++ GEL GE +VA IEL+EE +  + V D A EA+ VD EQ +V Q+AE++ +   +V VVE+  GD  DV V+   GAE   
Subjt:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE

Query:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWEE
        V+AD G+ P+  ++ ++G D + P LES+VG  E R+WEE
Subjt:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWEE

K4ABB5 Uncharacterized protein3.6e-1743.37Show/hide
Query:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE
        +EFVE+ VE  ER +R   R E  GE +VAD+EL+EE        + AVEA+GV+ E+  V +E +VVG+  R+  VVEVD GDGEDV VVG   AED  
Subjt:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE

Query:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWEE-----WRWRRWRWHRQICLMGRFWEE
        VVA  GA P+  +V  V GD V P L+  V   E  +         R RR R  R    +G  W++
Subjt:  VVADIGAIPIDVEVGQVGGDDVFPNLESSVGLEEPRIWEE-----WRWRRWRWHRQICLMGRFWEE

T1MNE5 Uncharacterized protein2.2e-1446.92Show/hide
Query:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE
        +E VE  V+  ER +R     E  GE +VAD++L+EE+    G    AVE + V+ E  +V +EAEVVG+ A +  VVEVD  DGED  VV  GGAE   
Subjt:  MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVE

Query:  VVADIGAIPIDVEVGQVGGDDVFPNLESSV
        VVA  GA P+  +V  V GDDV P LE  V
Subjt:  VVADIGAIPIDVEVGQVGGDDVFPNLESSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGTTGAATCGAATGTCGAGGAATTTGAGAGATGGGAGAGATTGAATTACAGAGGGGAACTCGTCGGAGAAGTCATTGTTGCTGACATCGAGCTCAAAGAGGA
GAGTGAGGCACCAGAAGGAGTTGGGGATGGTGCCGTAGAAGCGATTGGAGTTGATGGGGAACAGGGCAAGGTCGATCAGGAGGCTGAGGTCGTCGGGCAGGGTGCCCGAG
AGGTTGGCGTGGTTGAGGTCGATCTCGGGGACGGTGAGGATGTAGGGGTCGTCGGGGGCGGGGGCGCAGAAGATGTTGAAGTAGTTGCAGACATTGGGGCCATACCAATT
GACGTTGAAGTTGGTCAGGTCGGCGGTGATGACGTGTTTCCAAACTTGGAGAGCAGTGTAGGCCTTGAGGAGCCTCGGATTTGGGAGGAATGGCGGTGGCGGCGATGGCG
ATGGCATCGACAAATATGCTTGATGGGAAGGTTTTGGGAGGAGAATGAGAATGGAGATGGGGAAGAGGGATTTTGGGAGAAGGGATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGTTGAATCGAATGTCGAGGAATTTGAGAGATGGGAGAGATTGAATTACAGAGGGGAACTCGTCGGAGAAGTCATTGTTGCTGACATCGAGCTCAAAGAGGA
GAGTGAGGCACCAGAAGGAGTTGGGGATGGTGCCGTAGAAGCGATTGGAGTTGATGGGGAACAGGGCAAGGTCGATCAGGAGGCTGAGGTCGTCGGGCAGGGTGCCCGAG
AGGTTGGCGTGGTTGAGGTCGATCTCGGGGACGGTGAGGATGTAGGGGTCGTCGGGGGCGGGGGCGCAGAAGATGTTGAAGTAGTTGCAGACATTGGGGCCATACCAATT
GACGTTGAAGTTGGTCAGGTCGGCGGTGATGACGTGTTTCCAAACTTGGAGAGCAGTGTAGGCCTTGAGGAGCCTCGGATTTGGGAGGAATGGCGGTGGCGGCGATGGCG
ATGGCATCGACAAATATGCTTGATGGGAAGGTTTTGGGAGGAGAATGAGAATGGAGATGGGGAAGAGGGATTTTGGGAGAAGGGATTTTGA
Protein sequenceShow/hide protein sequence
MEFVESNVEEFERWERLNYRGELVGEVIVADIELKEESEAPEGVGDGAVEAIGVDGEQGKVDQEAEVVGQGAREVGVVEVDLGDGEDVGVVGGGGAEDVEVVADIGAIPI
DVEVGQVGGDDVFPNLESSVGLEEPRIWEEWRWRRWRWHRQICLMGRFWEENENGDGEEGFWEKGF