; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004660 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004660
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:5867971..5869980
RNA-Seq ExpressionLag0004660
SyntenyLag0004660
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.2e-4543.17Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAW----------------------RVHDRNRVLRTGP
        M    LLE WK   LT+EE+++AVDI S A+  +   +++ L+ KLL+ R I+  V++ TL IAW                      R  DRNR+LR GP
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAW----------------------RVHDRNRVLRTGP

Query:  WFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMARR----------------GALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCW
        W FD+ L+++D   ++ KP +M F  V+ WVHFFDL +ACMN+ MA R                    GS LRVR+  D+ KPL RGIKLN +GP+GGCW
Subjt:  WFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMARR----------------GALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCW

Query:  IPMQYEKLPQYCAHCGKLDHVRSDGGD
        IP+QYE+LP +  HCG+LDH+  D  D
Subjt:  IPMQYEKLPQYCAHCGKLDHVRSDGGD

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.7e-4745.29Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH---------------------DRNRVLRTGPW
        M+ E LL  W+K  LT+EE+E+A+D+  +AV  +   +   LVGKLLA R I++DV+ R L +AW+V                      D NRV++TGPW
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH---------------------DRNRVLRTGPW

Query:  FFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMA----------------RRGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWI
        FFDK L+VL    +    SE+ FN+VAFW+H FDLPM+ +N+ MA                 +G   G+SLR+R+LIDITKPLRRGIK+N +GP+GGCWI
Subjt:  FFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMA----------------RRGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWI

Query:  PMQYEKLPQYCAHCGKLDHVRSD
        P+QYE+LP +C  CG + H   D
Subjt:  PMQYEKLPQYCAHCGKLDHVRSD

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.3e-4142.59Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH----------------------DRNRVLRTGP
        M T  LLE WK   LT+EEEE A+D+ + A A + ++++  LVGKL   RPI   V++ T+  AW++                       DRN++ ++GP
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH----------------------DRNRVLRTGP

Query:  WFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMA-RRGALL---------------GSSLRVRILIDITKPLRRGIKLNAEGPIGGCW
        W FD+ L++++   A+  PSE+ F K+  WV FFDLP+ C+ + MA R G  L               GS+LRVR+++DI+KPLRRGIKLN +GPIGG W
Subjt:  WFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMA-RRGALL---------------GSSLRVRILIDITKPLRRGIKLNAEGPIGGCW

Query:  IPMQYEKLPQYCAHCG
        IP+QYE+LP +C HCG
Subjt:  IPMQYEKLPQYCAHCG

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.0e-2634.48Show/hide
Query:  EKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWR---------------------VHDRNRVLRTGPWFFD
        + LL+  + LSLT+EE+ + V I  E+ +    K D+CLVGKLL  RP   + ++ TL   W+                     V D+ RVL  GPW FD
Subjt:  EKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWR---------------------VHDRNRVLRTGPWFFD

Query:  KFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMAR----------------RGALLGSSLRVRILIDITKPLRRGIK--LNAEGPIGGCWIP
        K LL+L  M    +PS++   +V FWVH  +LP+  MN+ +                   G + G ++R+R+ +D+ KPLRRG+K  L++  PI   W+ 
Subjt:  KFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMAR----------------RGALLGSSLRVRILIDITKPLRRGIK--LNAEGPIGGCWIP

Query:  MQYEKLPQYCAHCGKLDHVRSDGGDETGRDDG
         +YE+LP YC  CG+L H   +  D+    DG
Subjt:  MQYEKLPQYCAHCGKLDHVRSDGGDETGRDDG

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]3.7e-2534.05Show/hide
Query:  EKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWR---------------------VHDRNRVLRTGPWFFD
        + L++  + LSLT+EE+ + V I  ++ +    K D+CLVGKLL  RP   + ++ TL   W+                     V D+ RVL  GPW FD
Subjt:  EKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWR---------------------VHDRNRVLRTGPWFFD

Query:  KFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMAR----------------RGALLGSSLRVRILIDITKPLRRGIK--LNAEGPIGGCWIP
        K LL+L  M    +PS++    V FWVH  +LP+  MN+ + +                 G   G ++R+R+ ID+ KPLRRG+K  L++  PI   W+ 
Subjt:  KFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMAR----------------RGALLGSSLRVRILIDITKPLRRGIK--LNAEGPIGGCWIP

Query:  MQYEKLPQYCAHCGKLDHVRSDGGDETGRDDG
         +YE+LP YC  CG+L H   +  D+    DG
Subjt:  MQYEKLPQYCAHCGKLDHVRSDGGDETGRDDG

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054812.0e-4543.17Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAW----------------------RVHDRNRVLRTGP
        M    LLE WK   LT+EE+++AVDI S A+  +   +++ L+ KLL+ R I+  V++ TL IAW                      R  DRNR+LR GP
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAW----------------------RVHDRNRVLRTGP

Query:  WFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMARR----------------GALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCW
        W FD+ L+++D   ++ KP +M F  V+ WVHFFDL +ACMN+ MA R                    GS LRVR+  D+ KPL RGIKLN +GP+GGCW
Subjt:  WFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMARR----------------GALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCW

Query:  IPMQYEKLPQYCAHCGKLDHVRSDGGD
        IP+QYE+LP +  HCG+LDH+  D  D
Subjt:  IPMQYEKLPQYCAHCGKLDHVRSDGGD

A0A6J1D765 uncharacterized protein LOC1110179024.4e-2433.94Show/hide
Query:  EKLLEGWKKLSLTAEEEE-LAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH---------------------DRNRVLRTGPWFF
        +++ + W+    T +E E + +D     +     K  +C+V KL   + I+++ IR  +   WRVH                     +++RVL +GPW F
Subjt:  EKLLEGWKKLSLTAEEEE-LAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH---------------------DRNRVLRTGPWFF

Query:  DKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMAR-RGALLGS---------------SLRVRILIDITKPLRRGIKL-NAEGPIGGCWIP
        +K LLVL   TA  +P +M FN  AFW+   ++P  C++  MA   GA LG                 +RVR+ ID++KPLRRGIKL N++G     W P
Subjt:  DKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMAR-RGALLGS---------------SLRVRILIDITKPLRRGIKL-NAEGPIGGCWIP

Query:  MQYEKLPQYCAHCGKLDH
        ++YEKLP +C  CGK+ H
Subjt:  MQYEKLPQYCAHCGKLDH

A0A6J1DU55 uncharacterized protein LOC1110231353.7e-4745.29Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH---------------------DRNRVLRTGPW
        M+ E LL  W+K  LT+EE+E+A+D+  +AV  +   +   LVGKLLA R I++DV+ R L +AW+V                      D NRV++TGPW
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH---------------------DRNRVLRTGPW

Query:  FFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMA----------------RRGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWI
        FFDK L+VL    +    SE+ FN+VAFW+H FDLPM+ +N+ MA                 +G   G+SLR+R+LIDITKPLRRGIK+N +GP+GGCWI
Subjt:  FFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMA----------------RRGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWI

Query:  PMQYEKLPQYCAHCGKLDHVRSD
        P+QYE+LP +C  CG + H   D
Subjt:  PMQYEKLPQYCAHCGKLDHVRSD

A0A6J1DX30 uncharacterized protein LOC1110248746.1e-4242.59Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH----------------------DRNRVLRTGP
        M T  LLE WK   LT+EEEE A+D+ + A A + ++++  LVGKL   RPI   V++ T+  AW++                       DRN++ ++GP
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVH----------------------DRNRVLRTGP

Query:  WFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMA-RRGALL---------------GSSLRVRILIDITKPLRRGIKLNAEGPIGGCW
        W FD+ L++++   A+  PSE+ F K+  WV FFDLP+ C+ + MA R G  L               GS+LRVR+++DI+KPLRRGIKLN +GPIGG W
Subjt:  WFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQIMA-RRGALL---------------GSSLRVRILIDITKPLRRGIKLNAEGPIGGCW

Query:  IPMQYEKLPQYCAHCG
        IP+QYE+LP +C HCG
Subjt:  IPMQYEKLPQYCAHCG

A0A803KRS5 Uncharacterized protein3.4e-2433.33Show/hide
Query:  EKLLEGWKKLSLTAEEEELAVDIASEAVADSTA-KMDICLVGKLLAPRPIASDVIRRTLSIAWRVH---------------------DRNRVLRTGPWFF
        E LL  ++K+ L  EE ++  D + E   + T  ++ + +VGKLL  +P  ++ ++RTL   WR+H                     D+ +VL   PWFF
Subjt:  EKLLEGWKKLSLTAEEEELAVDIASEAVADSTA-KMDICLVGKLLAPRPIASDVIRRTLSIAWRVH---------------------DRNRVLRTGPWFF

Query:  DKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMN-QIMARRGALLGSSL--------------RVRILIDITKPLRRGIKLNAEGPIGGCWIPMQ
        D  LLVL  +    +PSE+ FN    W+   D+P +  N + +   G  LG+ L              RV+++IDI KPLRRG+ L A G     W+P++
Subjt:  DKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMN-QIMARRGALLGSSL--------------RVRILIDITKPLRRGIKLNAEGPIGGCWIPMQ

Query:  YEKLPQYCAHCGKLDHVRS
        YE+L ++C  CG+LDH  S
Subjt:  YEKLPQYCAHCGKLDHVRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein9.1e-0627.7Show/hide
Query:  VLRTGPWFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQ-IMARRGALLGSSL---------------RVRILIDITKPLRRGIKLNAEG
        VLR GPW F+ ++++L       +P    F  + FWV    +P   +N+ ++   G  LG  L               RV +  DIT PLR         
Subjt:  VLRTGPWFFDKFLLVLDVMTAMAKPSEMPFNKVAFWVHFFDLPMACMNQ-IMARRGALLGSSL---------------RVRILIDITKPLRRGIKLNAEG

Query:  PIGGCWIPMQYEKLPQYCAHCGKLDH-----VRSDGGDETGRDDGGDD
         +    +  +YE+L  +C  CG L H     +  +GG+E   DD  D+
Subjt:  PIGGCWIPMQYEKLPQYCAHCGKLDH-----VRSDGGDETGRDDGGDD

AT3G42140.1 zinc ion binding;nucleic acid binding9.1e-0622.73Show/hide
Query:  SLTAEEEELAVDIASEAVADSTAKMDICLVGKLLA------PRPIASDVIRRTLSI------AWRVHDRNRVLRTGPWFFDKFLLVLDVMTAMAKPSEMP
        +L  + +E+A+ +  EA+       D  L    LA      P+ +  +V+ R L I               +LR GPW F+ ++ V+   T +   +E  
Subjt:  SLTAEEEELAVDIASEAVADSTAKMDICLVGKLLA------PRPIASDVIRRTLSI------AWRVHDRNRVLRTGPWFFDKFLLVLDVMTAMAKPSEMP

Query:  FNKVAFWVHFFDLPMACMN-QIMARRGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHVRSD---GGDETGRDDGG
        F ++ FW+    +P+  +  +I+   G  +G  L   +  D++                   +  QYEKL  +C  CG L H  S+    G++    D  
Subjt:  FNKVAFWVHFFDLPMACMN-QIMARRGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHVRSD---GGDETGRDDGG

Query:  DDTTCAGGRDEAPLSAADEP
        DD       ++ P    D P
Subjt:  DDTTCAGGRDEAPLSAADEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAATGTAAGTGTCTTGAGTAGCGTTGAGGTTATGGAGACAGAGAAGCTGCTTGAGGGTTGGAAAAAGTTGTCGTTAACTGCTGAGGAGGAGGAGTTGGCGGTGGA
TATTGCTTCGGAGGCGGTTGCGGATTCTACTGCTAAAATGGATATCTGTCTGGTGGGTAAGCTTCTGGCGCCGCGTCCGATTGCCAGTGACGTCATTCGCCGGACGCTTT
CAATTGCATGGCGTGTTCATGATCGAAACAGGGTTCTTCGAACTGGTCCGTGGTTTTTTGACAAATTTTTGTTGGTGCTGGATGTGATGACTGCTATGGCCAAACCATCG
GAGATGCCGTTTAACAAAGTGGCTTTTTGGGTGCACTTCTTTGATCTCCCTATGGCTTGTATGAACCAAATTATGGCCCGCCGAGGGGCTTTGTTGGGGTCTAGTCTACG
GGTGCGCATTTTGATTGACATTACTAAACCGCTTCGCCGTGGAATAAAGCTGAATGCCGAAGGGCCAATCGGCGGTTGTTGGATTCCTATGCAGTATGAGAAGTTGCCCC
AGTACTGTGCTCATTGTGGAAAACTGGATCACGTCCGGTCAGACGGAGGGGATGAAACAGGTCGTGACGACGGCGGGGATGACACAACCTGTGCCGGAGGTAGGGATGAA
GCACCCTTGTCGGCGGCTGATGAGCCGGTACCGGCGGAAAAGGCCGGGACGGTGCGGGAGCCGGTGGGTGTTGTTCCGGAGAAAACGGAGGTGGGTGCGAAATTTGGGGA
TGAGATAACTACCACTCACGATCTTTTAGCAGTTCCGGAAACGGCGGGGATTTCTAATACCGCTTCTGGTGATGGGCTGGTGGATGGTGATGGGTTGGTCGTTAAGGGGC
CGATTGTAGCGGGAATGGACTCTGGGTCGGGTCTTGTCTGTGGGCTAACTGCTGCTGCGTTGGAGTGTGGTTCTAATTCTGTGGGACAAGTTGGTTTGGCTGCTACTGGG
TCGATTGGGGAGGTACATTGGGGTTCTGATGGGCCTCCTATTCTCAAGGAGGTCGTGGACTTTGCTACTGAGATTGGGTCGTCGCTGTCAAACAAAATGTCGGCCCACAA
GTGGAAGCGGAAGGCTCGCTTGGGCGGTGTTTCGGGGTCTGATGGTGTGGAAATTAAAAAGCGTCAGACTGAGGGAATGGCCGGTGAGAGGTGTGCAAAGAAGGTAAAGC
AATCTGATACTGGGGTTCCGGAGTGTGCAGTTTATGTTGATTGTGGTCAGAATGTTTCGGCAGAGGCTGGTGTCCAGCCCTGCCGGGAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAATGTAAGTGTCTTGAGTAGCGTTGAGGTTATGGAGACAGAGAAGCTGCTTGAGGGTTGGAAAAAGTTGTCGTTAACTGCTGAGGAGGAGGAGTTGGCGGTGGA
TATTGCTTCGGAGGCGGTTGCGGATTCTACTGCTAAAATGGATATCTGTCTGGTGGGTAAGCTTCTGGCGCCGCGTCCGATTGCCAGTGACGTCATTCGCCGGACGCTTT
CAATTGCATGGCGTGTTCATGATCGAAACAGGGTTCTTCGAACTGGTCCGTGGTTTTTTGACAAATTTTTGTTGGTGCTGGATGTGATGACTGCTATGGCCAAACCATCG
GAGATGCCGTTTAACAAAGTGGCTTTTTGGGTGCACTTCTTTGATCTCCCTATGGCTTGTATGAACCAAATTATGGCCCGCCGAGGGGCTTTGTTGGGGTCTAGTCTACG
GGTGCGCATTTTGATTGACATTACTAAACCGCTTCGCCGTGGAATAAAGCTGAATGCCGAAGGGCCAATCGGCGGTTGTTGGATTCCTATGCAGTATGAGAAGTTGCCCC
AGTACTGTGCTCATTGTGGAAAACTGGATCACGTCCGGTCAGACGGAGGGGATGAAACAGGTCGTGACGACGGCGGGGATGACACAACCTGTGCCGGAGGTAGGGATGAA
GCACCCTTGTCGGCGGCTGATGAGCCGGTACCGGCGGAAAAGGCCGGGACGGTGCGGGAGCCGGTGGGTGTTGTTCCGGAGAAAACGGAGGTGGGTGCGAAATTTGGGGA
TGAGATAACTACCACTCACGATCTTTTAGCAGTTCCGGAAACGGCGGGGATTTCTAATACCGCTTCTGGTGATGGGCTGGTGGATGGTGATGGGTTGGTCGTTAAGGGGC
CGATTGTAGCGGGAATGGACTCTGGGTCGGGTCTTGTCTGTGGGCTAACTGCTGCTGCGTTGGAGTGTGGTTCTAATTCTGTGGGACAAGTTGGTTTGGCTGCTACTGGG
TCGATTGGGGAGGTACATTGGGGTTCTGATGGGCCTCCTATTCTCAAGGAGGTCGTGGACTTTGCTACTGAGATTGGGTCGTCGCTGTCAAACAAAATGTCGGCCCACAA
GTGGAAGCGGAAGGCTCGCTTGGGCGGTGTTTCGGGGTCTGATGGTGTGGAAATTAAAAAGCGTCAGACTGAGGGAATGGCCGGTGAGAGGTGTGCAAAGAAGGTAAAGC
AATCTGATACTGGGGTTCCGGAGTGTGCAGTTTATGTTGATTGTGGTCAGAATGTTTCGGCAGAGGCTGGTGTCCAGCCCTGCCGGGAATTATGA
Protein sequenceShow/hide protein sequence
MINVSVLSSVEVMETEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVHDRNRVLRTGPWFFDKFLLVLDVMTAMAKPS
EMPFNKVAFWVHFFDLPMACMNQIMARRGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHVRSDGGDETGRDDGGDDTTCAGGRDE
APLSAADEPVPAEKAGTVREPVGVVPEKTEVGAKFGDEITTTHDLLAVPETAGISNTASGDGLVDGDGLVVKGPIVAGMDSGSGLVCGLTAAALECGSNSVGQVGLAATG
SIGEVHWGSDGPPILKEVVDFATEIGSSLSNKMSAHKWKRKARLGGVSGSDGVEIKKRQTEGMAGERCAKKVKQSDTGVPECAVYVDCGQNVSAEAGVQPCREL