; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004702 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004702
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein Iojap-related, mitochondrial
Genome locationchr6:6215215..6217948
RNA-Seq ExpressionLag0004702
SyntenyLag0004702
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0090071 - negative regulation of ribosome biogenesis (biological process)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR004394 - Protein Iojap/ribosomal silencing factor RsfS
IPR043519 - Nucleotidyltransferase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029243.1 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.0e-8891.8Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIRCLQLWN+GVSV NHTLSSSTASSI +GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK
        VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK+RRKNNSKKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK

XP_022961631.1 protein Iojap-related, mitochondrial [Cucurbita moschata]1.7e-8891.8Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIRCLQLWN+GVSV NHTLSSSTASSI +GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK
        VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK+RRKNNSKKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK

XP_022997359.1 protein Iojap-related, mitochondrial [Cucurbita maxima]4.6e-8991.4Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIRCLQLWN+GVSV NHTLSSSTASSIN+GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQKQVK
        VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWST+TPQ+DSSQ+LD+ALVK+RRKNNSKKPAQK  K
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQKQVK

XP_023545975.1 protein Iojap-related, mitochondrial [Cucurbita pepo subsp. pepo]9.5e-8790.71Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML AQRIRSS A+SSTIR LQLWN+GVSV NHTLSSSTASSI +GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK
        VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK+RRKNNSKKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK

XP_038884261.1 protein Iojap-related, mitochondrial [Benincasa hispida]6.2e-8690.71Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRI+SS A SSTIR LQLWN+GVSVHNH LSSSTASS NKGLLDLQEVETILNNVKADD+KVI VRK+CDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK
        VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENAR+YYNLESLWSTETPQ+DSSQDLD+A VK+R KNNSKKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK

TrEMBL top hitse value%identityAlignment
A0A1S3BB26 protein Iojap-related, mitochondrial5.3e-8388.59Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A SSTIR LQLWN+GVSVH+H LSSST+SS +K LLDLQEVETILN VKADD+KVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNS-KKPAQK
        VKQKQKGAKQLVLPSVEGQE+GKWIVIDSGKVVVHALDENAR+YYNLESLWSTETP +DS+QDLD+ALVK+R KNNS KKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNS-KKPAQK

A0A5A7UYH0 Protein Iojap-related2.6e-8288.04Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIR S A SSTIR LQLWN+GVSVH+H LSSST+SS +K LLDLQEVETILN VKADD+KVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNS-KKPAQK
        VKQKQKGAKQLVLPSVEGQE+GKWIVIDSGKVVVHALDENAR+YYNLESLWSTETP +DS+QDLD+ALVK+R KNNS KKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNS-KKPAQK

A0A6J1BP74 protein Iojap-related, mitochondrial6.7e-8688.52Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        ML AQRIRSS A SSTIR LQ WNKG+ VHNHT+SSSTASS N GLLDLQEVET+LNNVKADD+KVIP+RKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK
        +KQKQKGA+QL+LPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTET  +DSSQDLD+ALVK+RRKNNSKKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK

A0A6J1HAW7 protein Iojap-related, mitochondrial8.4e-8991.8Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIRCLQLWN+GVSV NHTLSSSTASSI +GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK
        VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS +TPQ+DSSQ+LD+ALVK+RRKNNSKKPAQK
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQK

A0A6J1KB66 protein Iojap-related, mitochondrial2.2e-8991.4Show/hide
Query:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
        MLAAQRIRSS A+SSTIRCLQLWN+GVSV NHTLSSSTASSIN+GLLDLQEVETILNNVKADD++VIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK
Subjt:  MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYK

Query:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQKQVK
        VKQKQKGA+QLVLPSVEGQEDGKWIVIDSGKVVVHALDE ARTYYNLESLWST+TPQ+DSSQ+LD+ALVK+RRKNNSKKPAQK  K
Subjt:  VKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQKQVK

SwissProt top hitse value%identityAlignment
P0AAT6 Ribosomal silencing factor RsfS2.6e-1037.11Show/hide
Query:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS
        ++++K  DI  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Subjt:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS

P0AAT7 Ribosomal silencing factor RsfS2.6e-1037.11Show/hide
Query:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS
        ++++K  DI  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Subjt:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS

P0AAT8 Ribosomal silencing factor RsfS2.6e-1037.11Show/hide
Query:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS
        ++++K  DI  + V+      D M+  TG S+ HV +IA  ++    Q+ + A  L L  VEG+    WIV+D G V+VH + E +R  Y LE LWS
Subjt:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWS

Q02SH2 Ribosomal silencing factor RsfS4.0e-1140.62Show/hide
Query:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLW
        L ++KA DI  + VR      DYMV A G S+  VK++A  ++   K K+ G K L     EG E G+W ++D G VVVH +    R +Y+LE LW
Subjt:  LNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLW

Q9CAF9 Protein Iojap-related, mitochondrial2.2e-4161.18Show/hide
Query:  TLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKV
        + SSS   S    +L L EVE IL +VKAD++ VIP    C WAD+ V ATGRS WH++NIAQAL+Y+ KQKQKGAK ++LPSV+G  + KWIVID GK 
Subjt:  TLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKV

Query:  VVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVKVRRKNNSK-KPAQ
        VVHALDE AR Y+NLESLWS E+   D+S QDL    VKVR KNNSK KPA+
Subjt:  VVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVKVRRKNNSK-KPAQ

Arabidopsis top hitse value%identityAlignment
AT1G67620.1 Lojap-related protein1.5e-4261.18Show/hide
Query:  TLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKV
        + SSS   S    +L L EVE IL +VKAD++ VIP    C WAD+ V ATGRS WH++NIAQAL+Y+ KQKQKGAK ++LPSV+G  + KWIVID GK 
Subjt:  TLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQLVLPSVEGQEDGKWIVIDSGKV

Query:  VVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVKVRRKNNSK-KPAQ
        VVHALDE AR Y+NLESLWS E+   D+S QDL    VKVR KNNSK KPA+
Subjt:  VVHALDENARTYYNLESLWSTETPQNDSS-QDLDKALVKVRRKNNSK-KPAQ

AT3G12930.1 Lojap-related protein8.8e-0630.77Show/hide
Query:  EVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQ-KGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLES
        E+  + ++VKA DIKV+ V+    W  + + AT  S   +  I   +    ++K  K A   V P+        W ++D G VV+H      RT+YNLE 
Subjt:  EVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQ-KGAKQLVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLES

Query:  LWST----ETPQNDSSQ
         +      E P  D SQ
Subjt:  LWST----ETPQNDSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCGGCGCAAAGAATTCGATCTTCATTTGCCCTCTCTTCCACGATTCGTTGTCTTCAACTATGGAACAAAGGCGTTTCTGTTCACAATCATACTCTATCTTCCTC
CACCGCTAGCTCCATCAACAAAGGTTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAATAACGTGAAGGCAGACGATATCAAAGTGATACCAGTTCGCAAAGACTGTG
ATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGTCAAGCAAAAGCAGAAAGGAGCTAAACAG
TTAGTACTCCCTAGTGTGGAAGGGCAAGAAGATGGAAAGTGGATTGTCATCGACTCTGGTAAAGTAGTTGTTCATGCCCTTGATGAGAACGCCAGAACTTATTACAATCT
GGAGAGCCTTTGGTCCACCGAGACACCGCAAAATGACTCTTCTCAGGATTTGGACAAAGCTTTAGTGAAGGTTCGTCGGAAGAACAACTCCAAGAAACCAGCACAAAAAC
AAGTGAAAAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCGGCGCAAAGAATTCGATCTTCATTTGCCCTCTCTTCCACGATTCGTTGTCTTCAACTATGGAACAAAGGCGTTTCTGTTCACAATCATACTCTATCTTCCTC
CACCGCTAGCTCCATCAACAAAGGTTTACTTGATCTTCAGGAGGTCGAGACGATTCTGAATAACGTGAAGGCAGACGATATCAAAGTGATACCAGTTCGCAAAGACTGTG
ATTGGGCTGATTACATGGTGTTTGCCACTGGTAGGTCTACCTGGCATGTTAAGAACATTGCTCAAGCCCTAATTTACAAGGTCAAGCAAAAGCAGAAAGGAGCTAAACAG
TTAGTACTCCCTAGTGTGGAAGGGCAAGAAGATGGAAAGTGGATTGTCATCGACTCTGGTAAAGTAGTTGTTCATGCCCTTGATGAGAACGCCAGAACTTATTACAATCT
GGAGAGCCTTTGGTCCACCGAGACACCGCAAAATGACTCTTCTCAGGATTTGGACAAAGCTTTAGTGAAGGTTCGTCGGAAGAACAACTCCAAGAAACCAGCACAAAAAC
AAGTGAAAAATTGCTAA
Protein sequenceShow/hide protein sequence
MLAAQRIRSSFALSSTIRCLQLWNKGVSVHNHTLSSSTASSINKGLLDLQEVETILNNVKADDIKVIPVRKDCDWADYMVFATGRSTWHVKNIAQALIYKVKQKQKGAKQ
LVLPSVEGQEDGKWIVIDSGKVVVHALDENARTYYNLESLWSTETPQNDSSQDLDKALVKVRRKNNSKKPAQKQVKNC