; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004728 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004728
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranscription and mRNA export factor ENY2
Genome locationchr6:6452335..6455431
RNA-Seq ExpressionLag0004728
SyntenyLag0004728
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0015031 - protein transport (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR018783 - Transcription factor, enhancer of yellow 2
IPR038212 - Transcription factor EnY2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585223.1 Transcription and mRNA export factor ENY2, partial [Cucurbita argyrosperma subsp. sororia]9.9e-5197.27Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IR+FLAST I
Subjt:  IRSFLASTTI

KAG7020143.1 Transcription and mRNA export factor SUS1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-5190.76Show/hide
Query:  RSSSSPVSWRASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPD
        +S+   +  R SINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPD
Subjt:  RSSSSPVSWRASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPD

Query:  SVKAELLQRIRSFLASTTI
        SVKAELLQRIR+FLAST I
Subjt:  SVKAELLQRIRSFLASTTI

XP_008445505.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]1.7e-5097.27Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IRSFLAST I
Subjt:  IRSFLASTTI

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]4.4e-5198.18Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IRSFLAST I
Subjt:  IRSFLASTTI

XP_023002845.1 transcription and mRNA export factor ENY2 [Cucurbita maxima]9.9e-5197.27Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IR+FLAST I
Subjt:  IRSFLASTTI

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY22.4e-5096.36Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IRSFL ST I
Subjt:  IRSFLASTTI

A0A1S3BDR5 Transcription and mRNA export factor ENY28.1e-5197.27Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IRSFLAST I
Subjt:  IRSFLASTTI

A0A6J1BSW0 Transcription and mRNA export factor ENY25.8e-4995.45Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        RASINRPPTPE EDDR+QQ TFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IRSFL ST I
Subjt:  IRSFLASTTI

A0A6J1GGQ4 Transcription and mRNA export factor ENY22.1e-5198.18Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IRSFLAST I
Subjt:  IRSFLASTTI

A0A6J1KQ41 Transcription and mRNA export factor ENY24.8e-5197.27Show/hide
Query:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
        R SINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR
Subjt:  RASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQR

Query:  IRSFLASTTI
        IR+FLAST I
Subjt:  IRSFLASTTI

SwissProt top hitse value%identityAlignment
B5FZ63 Transcription and mRNA export factor ENY23.0e-2671.95Show/hide
Query:  TINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLA
        TIN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA
Subjt:  TINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLA

Q3ZBJ0 Transcription and mRNA export factor ENY28.7e-2671.6Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLA

Q6NQ54 Transcription and mRNA export factor ENY27.4e-3360.71Show/hide
Query:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL
        S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL
Subjt:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL

Query:  QRIRSFLASTTI
         RI++F+ S  +
Subjt:  QRIRSFLASTTI

Q9JIX0 Transcription and mRNA export factor ENY28.7e-2671.6Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLA

Q9NPA8 Transcription and mRNA export factor ENY28.7e-2671.6Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLA

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).5.2e-3460.71Show/hide
Query:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL
        S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL
Subjt:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL

Query:  QRIRSFLASTTI
         RI++F+ S  +
Subjt:  QRIRSFLASTTI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).3.4e-2549.11Show/hide
Query:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL
        S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  + +     + 
Subjt:  SINRPPTPEPED----DREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELL

Query:  QRIRSFLASTTI
          + S L + T+
Subjt:  QRIRSFLASTTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATATAGGTTTTGGATTTCTGACTTGCCGATCGTCGTCGTCTCCAGTCAGCTGGAGGGCTTCCATTAATCGGCCTCCCACGCCCGAACCGGAGGATGATCGAGAACA
GCAGCCTACTTTTCAAGAAACAATCAACATCAAGCTTATTGAAAGTGGCGAAAAAGAGCGGCTTAAAGAGCTTTTGAGAGAGAGGCTCATCGAATGCGGCTGGAAAGATG
AGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGTTGACGACCTTGTGCAGGTCATTACTCCGAAAGGCAGAGCCTCAGTTCCAGAT
TCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGCATCAACAACCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATATAGGTTTTGGATTTCTGACTTGCCGATCGTCGTCGTCTCCAGTCAGCTGGAGGGCTTCCATTAATCGGCCTCCCACGCCCGAACCGGAGGATGATCGAGAACA
GCAGCCTACTTTTCAAGAAACAATCAACATCAAGCTTATTGAAAGTGGCGAAAAAGAGCGGCTTAAAGAGCTTTTGAGAGAGAGGCTCATCGAATGCGGCTGGAAAGATG
AGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGTTGACGACCTTGTGCAGGTCATTACTCCGAAAGGCAGAGCCTCAGTTCCAGAT
TCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGCATCAACAACCATCTGA
Protein sequenceShow/hide protein sequence
MYIGFGFLTCRSSSSPVSWRASINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPD
SVKAELLQRIRSFLASTTI