; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004753 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004753
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationchr6:6710824..6713307
RNA-Seq ExpressionLag0004753
SyntenyLag0004753
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]5.2e-16890.24Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+ ALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKL+RGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEE DTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]4.0e-16890.53Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+ ALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKL+RGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEE DTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_022132156.1 clp protease adapter protein ClpF, chloroplastic [Momordica charantia]2.8e-16690.15Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MV+D+SIHAL ALGDPKVYGSTL WRKNFKQ S+ QL S  CF HQ +RSFS TSQP  L+RGNFK KAGWLFKGGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE
        LDLATRVQYALNIEQYEIAQ+LRTKLTEVE EIIKQQESK GLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRD+ISKLETESLAASA VLAYE
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE

Query:  SAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVD
        +AEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKL+RGSNQPFYQVLVDVRT+PDLLVAYVPEENLL PEE D ERFDHPYNSFLFYGVD
Subjt:  SAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVD

Query:  TAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
         AGDFIPIKQLREKYNRPRHEVP DPQDDEQ+GDD
Subjt:  TAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_022962595.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata]1.8e-16589.91Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF
        MV+DLSIHAL ALGDPKVYGSTLSWRKNFKQ S  T LTSRQ FWHQ MRSFS  SQP  LKRGNFKVKAGWLF+GGGQGL ARIERSENANNDILIFFF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGV
        ESAEYSFRLGQK RH+IFGYRGV+CGMDPVCCESSSWMEIAQVEKL+RG NQPFYQVLVDVRT+PDLLVAYV EENLLVPEE DTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        D+AGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Subjt:  DTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]1.3e-17192.6Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHAL ALGDPKVYGS LSWR+N   FKQ S TQLTSRQCFW+QCMRSFS TSQP  LKRGNFKVKAGWLFKGGGQ LG RIERSENANNDILIF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQ A+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKL+RGSNQPFYQVLVDVRTDPDLLVAYV EENLLVPEE D E FDHPYNSFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVDTAGDFIPIKQLREKYNRPR+EVPFDPQDDEQ+GDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

TrEMBL top hitse value%identityAlignment
A0A0A0KD67 YccV-like domain-containing protein7.5e-16588.46Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+ ALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAE+IKQQESK+GLTSKSEVQDKGLNIIRLRADLQ A+ESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGYRGV+CGMDPVCCESSSWMEIAQVEKL+RGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEE DTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPR+EVPF  +DDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A1S3BCC1 uncharacterized protein LOC1034884811.9e-16890.53Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+ ALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKL+RGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEE DTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 12.5e-16890.24Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+ ALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLNIIRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKL+RGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEE DTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A6J1BRG5 clp protease adapter protein ClpF, chloroplastic1.4e-16690.15Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MV+D+SIHAL ALGDPKVYGSTL WRKNFKQ S+ QL S  CF HQ +RSFS TSQP  L+RGNFK KAGWLFKGGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE
        LDLATRVQYALNIEQYEIAQ+LRTKLTEVE EIIKQQESK GLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRD+ISKLETESLAASA VLAYE
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE

Query:  SAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVD
        +AEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKL+RGSNQPFYQVLVDVRT+PDLLVAYVPEENLL PEE D ERFDHPYNSFLFYGVD
Subjt:  SAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVD

Query:  TAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
         AGDFIPIKQLREKYNRPRHEVP DPQDDEQ+GDD
Subjt:  TAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic8.9e-16689.91Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF
        MV+DLSIHAL ALGDPKVYGSTLSWRKNFKQ S  T LTSRQ FWHQ MRSFS  SQP  LKRGNFKVKAGWLF+GGGQGL ARIERSENANNDILIFFF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL+IIRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGV
        ESAEYSFRLGQK RH+IFGYRGV+CGMDPVCCESSSWMEIAQVEKL+RG NQPFYQVLVDVRT+PDLLVAYV EENLLVPEE DTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        D+AGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Subjt:  DTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 214.0e-0623.64Show/hide
Query:  LNIIRLRADLQNAIESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSN
        L ++ +   +Q     ++ A+   ++  +  +E   E +    K+ + E   +  + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +
Subjt:  LNIIRLRADLQNAIESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSN

Query:  QPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKY
        QPFY VLV+     D    Y  +ENL      + +   HP +   ++   T   +IP  +L  +Y
Subjt:  QPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKY

Q5R5S1 F-box only protein 216.2e-0729.09Show/hide
Query:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDF
        + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL      + +   HP +   ++   T   +
Subjt:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDF

Query:  IPIKQLREKY
        IP  +L  +Y
Subjt:  IPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic1.1e-11567.87Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF
        MV+  S+  L   G  KV  S+L  R     +  + L   +C   Q +R S S  S   SLK+ N  +V+A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY
        A+E AEY+FRLGQK+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLL PE+ D ERFDHPY SFL+Y
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        G DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE

Q8VDH1 F-box only protein 212.4e-0623.64Show/hide
Query:  LNIIRLRADLQNAIESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSN
        L ++ +   +Q     ++ A+   ++  +  +E   E +    K+ + E   +  + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +
Subjt:  LNIIRLRADLQNAIESENYALAAQLRDEISKLE--TESLAASAKVLAYES-AEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSN

Query:  QPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKY
        QPFY VLV+     D    Y  +ENL      + +   HP +   ++   T   +IP  +L  +Y
Subjt:  QPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein7.5e-11767.87Show/hide
Query:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF
        MV+  S+  L   G  KV  S+L  R     +  + L   +C   Q +R S S  S   SLK+ N  +V+A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY
        A+E AEY+FRLGQK+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLL PE+ D ERFDHPY SFL+Y
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        G DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE

AT2G03390.2 uvrB/uvrC motif-containing protein1.3e-9577.73Show/hide
Query:  LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ
        +N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG++IIRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK LA+E AEY+FRLGQ
Subjt:  LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ

Query:  KVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDFIPIKQ
        K+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLL PE+ D ERFDHPY SFL+YG DTAGDFIP+KQ
Subjt:  KVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDFIPIKQ

Query:  LREKYNRPRHEVPFDPQDDE
        LREKYNRPRHEVPFD QD++
Subjt:  LREKYNRPRHEVPFDPQDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCGGGATTTGTCAATACACGCTCTGAACGCCTTGGGAGATCCTAAGGTTTATGGATCAACTCTTTCGTGGAGGAAGAATTTCAAGCAGATAAGTCAAACCCAATT
AACTTCTAGGCAATGCTTTTGGCATCAATGCATGCGAAGCTTTTCCTCAACTAGCCAACCCTATAGTTTGAAACGAGGAAATTTCAAGGTTAAAGCTGGATGGTTGTTTA
AAGGGGGTGGACAAGGGTTGGGTGCTCGTATAGAGCGCAGCGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACTCGAGTACAGTATGCT
TTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACTGAGGTTGAAGCAGAAATCATCAAGCAACAAGAATCAAAAAGAGGGTTAACTTCAAAGAG
TGAAGTTCAAGACAAAGGTTTAAATATCATTCGTCTACGCGCAGACTTGCAGAATGCTATTGAAAGTGAAAATTATGCTTTGGCAGCACAACTGCGGGATGAGATTTCCA
AACTGGAAACTGAGTCCCTAGCTGCATCTGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAGGCACAGAATTTTTGGGTACAGA
GGTGTGGTTTGTGGAATGGATCCTGTATGCTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAACTAACCCGAGGTTCTAATCAGCCATTTTATCAGGTTTT
AGTAGATGTCCGTACAGACCCTGATTTGCTGGTTGCATATGTTCCTGAGGAAAATCTTCTTGTTCCTGAAGAATCAGATACGGAGAGGTTTGATCATCCGTATAATTCCT
TCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTGCGGGAGAAGTATAATCGGCCTCGACATGAAGTCCCCTTTGATCCTCAAGATGATGAG
CAACAGGGTGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCGGGATTTGTCAATACACGCTCTGAACGCCTTGGGAGATCCTAAGGTTTATGGATCAACTCTTTCGTGGAGGAAGAATTTCAAGCAGATAAGTCAAACCCAATT
AACTTCTAGGCAATGCTTTTGGCATCAATGCATGCGAAGCTTTTCCTCAACTAGCCAACCCTATAGTTTGAAACGAGGAAATTTCAAGGTTAAAGCTGGATGGTTGTTTA
AAGGGGGTGGACAAGGGTTGGGTGCTCGTATAGAGCGCAGCGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACTCGAGTACAGTATGCT
TTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACTGAGGTTGAAGCAGAAATCATCAAGCAACAAGAATCAAAAAGAGGGTTAACTTCAAAGAG
TGAAGTTCAAGACAAAGGTTTAAATATCATTCGTCTACGCGCAGACTTGCAGAATGCTATTGAAAGTGAAAATTATGCTTTGGCAGCACAACTGCGGGATGAGATTTCCA
AACTGGAAACTGAGTCCCTAGCTGCATCTGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAGGCACAGAATTTTTGGGTACAGA
GGTGTGGTTTGTGGAATGGATCCTGTATGCTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAACTAACCCGAGGTTCTAATCAGCCATTTTATCAGGTTTT
AGTAGATGTCCGTACAGACCCTGATTTGCTGGTTGCATATGTTCCTGAGGAAAATCTTCTTGTTCCTGAAGAATCAGATACGGAGAGGTTTGATCATCCGTATAATTCCT
TCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTGCGGGAGAAGTATAATCGGCCTCGACATGAAGTCCCCTTTGATCCTCAAGATGATGAG
CAACAGGGTGATGATTAA
Protein sequenceShow/hide protein sequence
MVRDLSIHALNALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQLDLATRVQYA
LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNIIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHRIFGYR
GVVCGMDPVCCESSSWMEIAQVEKLTRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLVPEESDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
QQGDD