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Lag0004799 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004799
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr6:7143798..7144205
RNA-Seq ExpressionLag0004799
SyntenyLag0004799
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598654.1 putative RING-H2 finger protein ATL69, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3282.57Show/hide
Query:  MSSADPPS----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVL
        MSSADPPS          AASP  AGVGLGYGIAIAVSILVFISTIMLVSYACIR KSTRPRPRP  S  PLPP AA NVVVLMVGLDGSIIESYPKLVL
Subjt:  MSSADPPS----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVL

Query:  GESRRLPAP
        GESRRLPAP
Subjt:  GESRRLPAP

KAG7029595.1 putative RING-H2 finger protein ATL69, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-3180Show/hide
Query:  MSSADPPS----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRP-SASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLV
        MSSAD PS          AASP  AGVGLGYGIAIAVSILVFISTIMLVSYACIR KSTRPRPRP      PLPP AA NVVVLMVGLDGSIIESYPKLV
Subjt:  MSSADPPS----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRP-SASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLV

Query:  LGESRRLPAP
        LGESRRLPAP
Subjt:  LGESRRLPAP

XP_022961745.1 putative RING-H2 finger protein ATL69 [Cucurbita moschata]7.0e-3179.28Show/hide
Query:  MSSADPPS-----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRP-SASQLPLPPSAAGNVVVLMVGLDGSIIESYPKL
        MSSAD PS           AASP  AGVGLGYGIAIAVSILVFISTIMLVSYACIR KSTRPRPRP      PLPP AA NVVVLMVGLDGSIIESYPKL
Subjt:  MSSADPPS-----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRP-SASQLPLPPSAAGNVVVLMVGLDGSIIESYPKL

Query:  VLGESRRLPAP
        VLGESRRLPAP
Subjt:  VLGESRRLPAP

XP_022997272.1 putative RING-H2 finger protein ATL69 [Cucurbita maxima]1.7e-3282.57Show/hide
Query:  MSSADPPS----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVL
        MSSADPPS          AASP  AGVGLGYGIAIAVSILVFISTIMLVSYACIR KSTRPRPRP  S  PLPP AA NVVVLMVGLDGSIIESYPKLVL
Subjt:  MSSADPPS----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVL

Query:  GESRRLPAP
        GESRRLPAP
Subjt:  GESRRLPAP

XP_023546361.1 putative RING-H2 finger protein ATL69 [Cucurbita pepo subsp. pepo]2.6e-3385.05Show/hide
Query:  MSSADPPS--------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGE
        MSSADPPS        AASP  AGVGLGYGIAIAVSILVFISTIMLVSYACIR KSTRPRPRPSA   PLPP AA NVVVLMVGLDGSIIESYPKLVLGE
Subjt:  MSSADPPS--------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGE

Query:  SRRLPAP
        SRRLPAP
Subjt:  SRRLPAP

TrEMBL top hitse value%identityAlignment
A0A0A0KFY2 RING-type domain-containing protein4.3e-2676.53Show/hide
Query:  MSSADPPSAASPA-GVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP
        MSSA PPS  SPA G+GLGYGIAIAVSILVFIST+ML+SYACIRVKS   RP   ++ LP PP+   NVVVLMVGL GSIIESYPKLVLGESRRLP P
Subjt:  MSSADPPSAASPA-GVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP

A0A1S3BCM0 putative RING-H2 finger protein ATL694.4e-3185Show/hide
Query:  MSSADPPSAASPA-GVGLGYGIAIAVSILVFISTIMLVSYACIRVK-STRPRPRPSASQLPLPPSA-AGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP
        MSSA PPS  SPA GVGLGYGIAIAVSILVFIST+ML+SYACIRVK STRPRPRPSA+ LP PP+A   NVVVLMVGLDGSIIESYPKLVLGESRRLP P
Subjt:  MSSADPPSAASPA-GVGLGYGIAIAVSILVFISTIMLVSYACIRVK-STRPRPRPSASQLPLPPSA-AGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP

A0A5A7V8V8 Putative RING-H2 finger protein ATL692.9e-3083Show/hide
Query:  MSSADPPSAASPA-GVGLGYGIAIAVSILVFISTIMLVSYACIRVK-STRPRPRPSASQLPLPPSA-AGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP
        MSSA PPS  SPA GVGLGYGIAIAVSILVFIST+ML+SYACIRVK STRPRPRP+A+ LP PP+A   NVVVLMVGLDGSI ESYPKLVLGESRRLP P
Subjt:  MSSADPPSAASPA-GVGLGYGIAIAVSILVFISTIMLVSYACIRVK-STRPRPRPSASQLPLPPSA-AGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP

A0A6J1HD62 putative RING-H2 finger protein ATL693.4e-3179.28Show/hide
Query:  MSSADPPS-----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRP-SASQLPLPPSAAGNVVVLMVGLDGSIIESYPKL
        MSSAD PS           AASP  AGVGLGYGIAIAVSILVFISTIMLVSYACIR KSTRPRPRP      PLPP AA NVVVLMVGLDGSIIESYPKL
Subjt:  MSSADPPS-----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRP-SASQLPLPPSAAGNVVVLMVGLDGSIIESYPKL

Query:  VLGESRRLPAP
        VLGESRRLPAP
Subjt:  VLGESRRLPAP

A0A6J1K4J2 putative RING-H2 finger protein ATL698.0e-3382.57Show/hide
Query:  MSSADPPS----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVL
        MSSADPPS          AASP  AGVGLGYGIAIAVSILVFISTIMLVSYACIR KSTRPRPRP  S  PLPP AA NVVVLMVGLDGSIIESYPKLVL
Subjt:  MSSADPPS----------AASP--AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVL

Query:  GESRRLPAP
        GESRRLPAP
Subjt:  GESRRLPAP

SwissProt top hitse value%identityAlignment
Q9FG21 Putative RING-H2 finger protein ATL714.4e-0435.48Show/hide
Query:  GLGYGIAIAVSILVFISTIMLVSYACIR-------VKSTRPRPRPSASQLPLPP---------SAAGNVVVLMVGLDGSIIESYPKLVLGESR
        GL YGI +++ IL+ I+TI L SY C R         + R R R   S   LPP           +  VVV ++GL   +I+ +PKL   E+R
Subjt:  GLGYGIAIAVSILVFISTIMLVSYACIR-------VKSTRPRPRPSASQLPLPP---------SAAGNVVVLMVGLDGSIIESYPKLVLGESR

Q9FL42 Putative RING-H2 finger protein ATL692.9e-1657.73Show/hide
Query:  MSSADPPSAASPAGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP
        MS   PP+    +GVGLGYGIAIAVSILV IS IML SY CIR KST      S   L LP  AA     + +GLD  +IESYP++VLG+SRRLP P
Subjt:  MSSADPPSAASPAGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP

Arabidopsis top hitse value%identityAlignment
AT2G35910.1 RING/U-box superfamily protein2.0e-0430.59Show/hide
Query:  GLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAPTTA
        G  YGI +++ +L+ I+TI L SY C R + +    + +     +       ++ ++ GLD   I+SYPK++  E++    PTTA
Subjt:  GLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAPTTA

AT3G61550.1 RING/U-box superfamily protein2.7e-0436.36Show/hide
Query:  PPSAASP---AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVV----------------VLMVGLDGSIIESYPK
        PP    P     +GLGY IAIA+  LV ISTI+L SY C R    R     + +      S  G +V                V++ GLD S+I SYPK
Subjt:  PPSAASP---AGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVV----------------VLMVGLDGSIIESYPK

AT5G06490.1 RING/U-box superfamily protein3.1e-0535.48Show/hide
Query:  GLGYGIAIAVSILVFISTIMLVSYACIR-------VKSTRPRPRPSASQLPLPP---------SAAGNVVVLMVGLDGSIIESYPKLVLGESR
        GL YGI +++ IL+ I+TI L SY C R         + R R R   S   LPP           +  VVV ++GL   +I+ +PKL   E+R
Subjt:  GLGYGIAIAVSILVFISTIMLVSYACIR-------VKSTRPRPRPSASQLPLPP---------SAAGNVVVLMVGLDGSIIESYPKLVLGESR

AT5G07040.1 RING/U-box superfamily protein2.1e-1757.73Show/hide
Query:  MSSADPPSAASPAGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP
        MS   PP+    +GVGLGYGIAIAVSILV IS IML SY CIR KST      S   L LP  AA     + +GLD  +IESYP++VLG+SRRLP P
Subjt:  MSSADPPSAASPAGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAP

AT5G53110.1 RING/U-box superfamily protein1.2e-0435.8Show/hide
Query:  VGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLP
        + +G GI  A+ +      +     +CI+ +   P P  + +Q     S+     V+++GLDG  IESYPK+VLGES+RLP
Subjt:  VGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGATCCTCCTTCCGCCGCCTCCCCCGCCGGCGTCGGCCTCGGCTACGGCATCGCCATCGCCGTCAGCATCCTCGTCTTCATCTCCACCATCATGCTCGT
CTCCTACGCCTGCATTCGCGTCAAATCCACCCGCCCCCGCCCTAGACCCTCCGCCTCTCAGCTCCCTCTCCCGCCTTCCGCCGCCGGCAATGTGGTGGTTCTCATGGTCG
GATTAGACGGCTCCATCATCGAATCCTACCCTAAGTTGGTCCTCGGAGAGAGCCGCCGTCTTCCTGCCCCAACCACGGCCCTTGCTCCATTTGCCTCTCCGATTACCAGC
CCAACGATTCTCTCCGCTGCATTCCCGATTGCCGCCACTGCTTCCACTCCGATTGCGTCGATGAATGGCTCCGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGCCGATCCTCCTTCCGCCGCCTCCCCCGCCGGCGTCGGCCTCGGCTACGGCATCGCCATCGCCGTCAGCATCCTCGTCTTCATCTCCACCATCATGCTCGT
CTCCTACGCCTGCATTCGCGTCAAATCCACCCGCCCCCGCCCTAGACCCTCCGCCTCTCAGCTCCCTCTCCCGCCTTCCGCCGCCGGCAATGTGGTGGTTCTCATGGTCG
GATTAGACGGCTCCATCATCGAATCCTACCCTAAGTTGGTCCTCGGAGAGAGCCGCCGTCTTCCTGCCCCAACCACGGCCCTTGCTCCATTTGCCTCTCCGATTACCAGC
CCAACGATTCTCTCCGCTGCATTCCCGATTGCCGCCACTGCTTCCACTCCGATTGCGTCGATGAATGGCTCCGTATGA
Protein sequenceShow/hide protein sequence
MSSADPPSAASPAGVGLGYGIAIAVSILVFISTIMLVSYACIRVKSTRPRPRPSASQLPLPPSAAGNVVVLMVGLDGSIIESYPKLVLGESRRLPAPTTALAPFASPITS
PTILSAAFPIAATASTPIASMNGSV