; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004810 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004810
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:7271574..7273178
RNA-Seq ExpressionLag0004810
SyntenyLag0004810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNY08539.1 ribonuclease H [Trifolium pratense]7.2e-7535.71Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------
        G+DITR  L++LN   +  P N+T I LIPK+NKP    +FRPISLC+V  KII+K +AN++K ++ ++ISH Q+AF+P                     
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------

Query:  ---------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR---------------------------------
                                    +  + F    I  IM+CV TV F +LING P+  F  +R                                 
Subjt:  ---------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR---------------------------------

Query:  ------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNKV
                          DDS++F RAT ++ E +K ++ +Y+  SG  +N+ KS  + SK +N    + + +IL + + D    YLG P+  GR K + 
Subjt:  ------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNKV

Query:  LWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQV
           ++D+VWK L+GWK    S  G+  LI AVAQAIPTY MS F LP+ +CN + ++ SKFWWG + +  + HW++W++    K++GGMGFRDI  FN+ 
Subjt:  LWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQV

Query:  MLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
        +LAKQ WRIL  PNSL+A++L+ KYF H NFL+A
Subjt:  MLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

XP_023913142.1 uncharacterized protein LOC112024740 [Quercus suber]1.3e-7638.85Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------
        G D++   L  LN    +  +N T I LIPKV  P+KM  FRPISLC+VIYKIISKVLAN++K ++  +IS  Q+AF+P                     
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------

Query:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------
                                    ++ +LGF E WI ++M CV T  F V ING        SR                                
Subjt:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------

Query:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK
                           DDSLIF RA  ++ + +   LK Y + SG  INF+KSS   S N ++ +  ++ + LGVR  D    YLG+P+  GR K +
Subjt:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK

Query:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ
            +K+RVWK LQGW+G L S  GKEVLI AVAQ+IPTYTM  F LP  +CNE++ LC++FWWG SG+  + HW SWK L   K  GGMGFRDI  FN 
Subjt:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ

Query:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
         MLAKQ WR++   NSLL+   + KYF   +FLEA
Subjt:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

XP_030505362.1 uncharacterized protein LOC115720349 [Cannabis sativa]5.0e-7636.55Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAF-----------------------
        GE++T+VCL ILNE   +  +N+T I LIPK+ KP +M  FRPISLC+VIYKI++K LA +MK  +   IS  Q+AF                       
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAF-----------------------

Query:  --------------------------IPVVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------
                                  I ++  LG+EE WI+KIMRCV +V F VLING     F  +R                                
Subjt:  --------------------------IPVVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------

Query:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK
                           DDS +F      +C+++  IL+ Y  +SG  IN +KS   +   I+      L+  LGV L      YLG+PS  GR+K +
Subjt:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK

Query:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ
        V   +KD+VW  L+ WK ++FS  GKE+LI AV QAIP+Y+MSCF+LP+ + + ++ L + FWWG + EN + HW +W +L   K+ GG+GFR +  FNQ
Subjt:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ

Query:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
         +LAKQ WR+++HP+SLLARVL+  Y+ +++FL+A
Subjt:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]7.0e-7837.93Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------
        G+ +    L  LN    +  +N+T I LIPKV  P++M +FRPISLC+VIYKIISKVLAN++K+++  IIS  Q+AF+P                     
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------

Query:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------
                                    ++ K+GF  GWI+++M CV T  F +L+NG P      SR                                
Subjt:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------

Query:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK
                           DDSL+F +AT  + E++  IL+ YE  SG +IN +KSS   S N ++ +  ++ +ILGV+  D    YLG+P+  GR K  
Subjt:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK

Query:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ
           ++KDRVWK LQGWKG L S  GKE+LI AVAQAIPTYTMS F++P  +C+E+  LC++FWWG  G   + HW SW +L   K  GGMGFRD+  FN 
Subjt:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ

Query:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
         MLAKQ WR++   +SLL R  + +YF  ++FLEA
Subjt:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

XP_030964220.1 uncharacterized protein LOC115985421 [Quercus lobata]4.2e-7537.7Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------
        G +I  + L +LN    +  +N T I+LIPK N+P KM +F PISLC+  YKIISKVLAN++K ++ +IIS  Q+AF P                     
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------

Query:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------
                                    V+ KLGF + WI  +M CV +V + VLING      + SR                                
Subjt:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------

Query:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK
                           DDSL+F +A  ++C ++  IL +YE+ SG  IN DKSS   S N  +D    +  ILG         YLG+PS  G+ K +
Subjt:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK

Query:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ
        V  +VKDRV K L GWKG L S+GG+E+LI AVAQA+PTYTMSCF+LP+++C+++  +   FWWG   + N+  W+SWKR+   K  GGMGFR+I  FN 
Subjt:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ

Query:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
         MLAKQ WRIL +P+SL+A+V + KYF +N+ L +
Subjt:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

TrEMBL top hitse value%identityAlignment
A0A2N9EK17 Reverse transcriptase domain-containing protein2.3e-7940.49Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------
        G D+    L  L     +  LN+T IALIPKV K + + +FRPISLC+V+YKIISKVLAN+MK ++  +IS  Q+AF+P                     
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------

Query:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR----DDSLIFYR--------------------
                                    V+ K+GFE  W+  IM C+ TV + VLING P  Y   SR     D L  Y                     
Subjt:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR----DDSLIFYR--------------------

Query:  --ATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNKVLWKVKDRVWKVLQGWKGSLFSMGG
          A   D  ++K IL  YE  SG  +NF+KS+   SKN  +    ++S ILG  L+ + G YLG+P   GRKK +   + K R+WK LQGWKG L S  G
Subjt:  --ATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNKVLWKVKDRVWKVLQGWKGSLFSMGG

Query:  KEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGK
        +EVLI AVA AIPTY MSCFK+P+++C+EI  L S+FWWG  G+  + HW+ W++L   K  GG+GFRD+ LFNQ ML KQ WR+L + +SL+ +VL+ K
Subjt:  KEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGK

Query:  YFHHNNFLEA
        YF  ++F++A
Subjt:  YFHHNNFLEA

A0A2N9J3U0 Reverse transcriptase domain-containing protein4.4e-7836.09Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------
        G+D+T   L+ L+  + +  +N T I LIPK+  P+ M +FRPISLC+V+YKIISKVLAN++K ++D IIS  Q+AF+P                     
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP---------------------

Query:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------
                                    ++ KLGF++ W+  IM+C+ +V + V++NG P+ Y   +R                                
Subjt:  ----------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------

Query:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK
                           DDSL+F RA   +C+++  IL  YE  SG  +N +K+S   S N + D    +  +L    +  +G YLG+P   GR K +
Subjt:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK

Query:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ
           ++K ++ K L GWKG L S  G+E+LI +VAQAIP YTMSCF++P ++C+EIN + SKFWWG   E  + HW  W  +   K  GGMGFRD+ LFNQ
Subjt:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ

Query:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
         +LAKQ WR+L HPN+LL R+L+ KYF + +F+EA
Subjt:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

A0A803PRV5 Uncharacterized protein6.8e-7936.78Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFI----------------------
        GE+++ VCL ILNE   I  +N+T I LIPK++KP +M +FRPISLC+VIYKII+K LA +MK  M  +IS  Q+AF+                      
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFI----------------------

Query:  ---------------------------PVVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------
                                    ++  LG+E+ WI+K+MRCVE+V F VLING     F  +R                                
Subjt:  ---------------------------PVVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------

Query:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK
                           DDS +F  A   +C+++K IL++Y  +SG  +N +KS   + K I+  +   L+  LGVR+      YLG+PS  GR+K +
Subjt:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK

Query:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ
        V   +K++VW  L+GWK S+FS  GKE+LI AV QAIP+YTMSCF+LP+ +   ++ L + FWWG + E+ + HW +W +L I K+ GG+GFR +  FNQ
Subjt:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ

Query:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
         +LAKQ WR+L++P+ LL R+L+  Y+ + +F+EA
Subjt:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

A0A803Q6L7 Uncharacterized protein8.0e-8039.6Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFI----------------------
        GE++T+VCL ILN+ + I  +N+T I LIPK+ KP +M  FRPISLC+V+YKII+K LA +MK  +   IS  Q+AF+                      
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFI----------------------

Query:  ---------------------------PVVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR---------------DDSLIFYRATAKDCESV
                                    ++  LG++E WI KIMRCV +V F VLING     F  SR               DDS +F      +C+++
Subjt:  ---------------------------PVVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR---------------DDSLIFYRATAKDCESV

Query:  KRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNKVLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQA
           L +Y  +SG  IN DKS   +   I+      L+  LGV+L      YLG+PS  GR+K +V   +KD+VW  L+GWK S+FS  GKE+LI AV QA
Subjt:  KRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNKVLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQA

Query:  IPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
        IP+Y+MSCF+LP+ +   ++ L + FWWG + EN + HW +W ++   K+ GG+GFR +  FNQ +LAKQ WR+++ P+SLLARVL+  Y+ + +FL+A
Subjt:  IPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

A0A803Q9W0 Uncharacterized protein1.8e-7937.47Show/hide
Query:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFI----------------------
        G DIT+VCL ILN  +D   LN T + LIPK+ +P ++  +RPISLC+V YKII+K LAN+MK  +  +IS  Q+AFI                      
Subjt:  GEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFI----------------------

Query:  ---------------------------PVVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------
                                    ++  LG+++ W+ KIM C++++ F +L+NG  S     SR                                
Subjt:  ---------------------------PVVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYFASSR--------------------------------

Query:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK
                           DDS IF  AT  DC+S+K IL EY  +SG  INFDKS   + K IN    + L+ ILGV+L D    YLG+P+  G+KK +
Subjt:  -------------------DDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNK

Query:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ
        V   ++ ++   LQGWK SLFS  G+E+L+ A+ QAIPTY MSCF+LP+ +  +I+ + ++FWWG S    + HW +WK+L   K++GGMGF+++ LFNQ
Subjt:  VLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQ

Query:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
         +LAKQ W+I+N+P+S+LARVL+  Y+ ++NFLEA
Subjt:  VMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.5e-0633.64Show/hide
Query:  EDITRVCLKILNEEEDIGPLNNTW----IALIPKVNK-PDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIPVVAKLGFEEGW--IKKI
        E++    LK+    E  G L N++    I LIPK  +   K E FRPISL ++  KI++K+LAN++++ +  +I H Q  FIP +      +GW  I+K 
Subjt:  EDITRVCLKILNEEEDIGPLNNTW----IALIPKVNK-PDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIPVVAKLGFEEGW--IKKI

Query:  MRCVETV
        +  ++ +
Subjt:  MRCVETV

P08548 LINE-1 reverse transcriptase homolog1.7e-1021.05Show/hide
Query:  EDITRVCLKILNEEEDIGPLNNTW----IALIPKVNK-PDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP-----------------
        E++  + L +    E  G L NT+    I LIPK  K P + E +RPISL ++  KI++K+L N++++ +  II H Q  FIP                 
Subjt:  EDITRVCLKILNEEEDIGPLNNTW----IALIPKVNK-PDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIP-----------------

Query:  ------------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYF----------------------------------
                                       + K+G E  ++K I          +++NGV    F                                  
Subjt:  ------------------------------VVAKLGFEEGWIKKIMRCVETVKFLVLINGVPSNYF----------------------------------

Query:  ------------ASSRDDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINK-DRALELS----------KILGVRLSDSIGDYLGMPS
                    +   DD +++   T      +  ++KEY +VSG+ IN  KS   I  N N+ ++ ++ S          K LGV L+  + D      
Subjt:  ------------ASSRDDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINK-DRALELS----------KILGVRLSDSIGDYLGMPS

Query:  QTGRKKNKVLWKVKDRVWKVLQGWKGSLFSMGGK--EVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGM
        +T RK+          + + +  WK    S  G+   V ++ + +AI  +     K P S   ++ K+   F W     N +   ++   L      GG+
Subjt:  QTGRKKNKVLWKVKDRVWKVLQGWKGSLFSMGGK--EVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGM

Query:  GFRDINLFNQVMLAKQSW
           D+ L+ + ++ K +W
Subjt:  GFRDINLFNQVMLAKQSW

P0C2F6 Putative ribonuclease H protein At1g657501.1e-1732.12Show/hide
Query:  MPSQTGRKKNKVLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGG
        MP    R       ++ +RV   + GW+    S  G+  L  AV  ++P ++MS   LPQS+ N +++L   F WG + E  + H + W ++   K  GG
Subjt:  MPSQTGRKKNKVLWKVKDRVWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGG

Query:  MGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKY
        +G R     N+ +++K  WR+L   NSL   VL+ KY
Subjt:  MGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKY

P11369 LINE-1 retrotransposable element ORF2 protein3.9e-0734.26Show/hide
Query:  EDITRVCLKILNEEEDIGPLNNTW----IALIPKVNK-PDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIPVVAKLGFEEGWIKKIMR
        ED+  +  K+ ++ E  G L N++    I LIPK  K P K+E FRPISL ++  KI++K+LAN+++  + +II   Q  FIP +      +GW   I +
Subjt:  EDITRVCLKILNEEEDIGPLNNTW----IALIPKVNK-PDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIPVVAKLGFEEGWIKKIMR

Query:  CVETVKFL
         +  + ++
Subjt:  CVETVKFL

P93295 Uncharacterized mitochondrial protein AtMg003101.6e-2143Show/hide
Query:  AIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIK-DRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLE
        A+P Y MSCF+L + +C ++    ++FWW       +  W++W++L   K D GG+GFRD+  FNQ +LAKQS+RI++ P++LL+R+LR +YF H++ +E
Subjt:  AIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIK-DRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLE

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein5.4e-0455.88Show/hide
Query:  NNTWIALIPKVNKPDKMEKFRPISLCSVIYKIIS
        N T I LIPKV   D++  FRP+S C+V+YKII+
Subjt:  NNTWIALIPKVNKPDKMEKFRPISLCSVIYKIIS

AT4G29090.1 Ribonuclease H-like superfamily protein1.4e-2345Show/hide
Query:  AIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA
        A+PTYTM+CF LP+++C +I  + + FWW    E    HW +W  L   K  GG+GF+DI  FN  +L KQ WR+L+ P SL+A+V + +YFH ++ L A
Subjt:  AIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLEA

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-2243Show/hide
Query:  AIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIK-DRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLE
        A+P Y MSCF+L + +C ++    ++FWW       +  W++W++L   K D GG+GFRD+  FNQ +LAKQS+RI++ P++LL+R+LR +YF H++ +E
Subjt:  AIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIK-DRGGMGFRDINLFNQVMLAKQSWRILNHPNSLLARVLRGKYFHHNNFLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGAGAAATGGGAGCGTTTGCCTGTCAACGTGGGGAGGATATCACGAGAGTGTGCCTTAAAATTCTCAACGAAGAAGAGGATATAGGCCCTCTTAATAACACATG
GATCGCTTTAATCCCAAAGGTCAACAAGCCAGACAAAATGGAAAAGTTTAGGCCAATTAGTTTGTGCAGCGTGATTTACAAGATCATATCCAAAGTGCTTGCAAACAAAA
TGAAAAGAATGATGGATTCCATTATTTCCCATATTCAGGCTGCTTTCATCCCGGTCGTGGCCAAGCTTGGCTTTGAAGAAGGCTGGATCAAGAAGATTATGAGATGTGTT
GAGACAGTGAAGTTCTTAGTTTTGATCAATGGGGTTCCTTCAAATTATTTTGCGTCTAGTAGAGATGACAGTCTTATTTTTTATAGAGCAACCGCCAAGGATTGTGAATC
TGTCAAGCGGATATTGAAAGAATATGAAGATGTTTCGGGCCATACTATAAATTTCGATAAGTCCTCTTGTATGATAAGCAAAAACATCAACAAAGATAGAGCGTTGGAGT
TAAGCAAGATATTGGGTGTTAGACTCTCGGATTCCATTGGGGATTACCTTGGCATGCCTTCTCAGACGGGCCGAAAGAAAAACAAGGTGTTATGGAAGGTGAAAGATAGA
GTTTGGAAAGTTCTTCAGGGTTGGAAAGGAAGTCTGTTCTCGATGGGCGGTAAGGAAGTCTTGATCAATGCAGTGGCCCAGGCTATCCCCACTTACACAATGAGTTGTTT
TAAGCTTCCCCAGTCGATGTGCAACGAGATAAACAAATTGTGCTCTAAGTTCTGGTGGGGATTGTCGGGAGAAAATAACAGAGCCCACTGGATGAGTTGGAAGAGGCTTT
ACATAATCAAAGATAGGGGAGGTATGGGCTTCAGGGACATAAACTTATTCAATCAAGTCATGCTCGCTAAGCAAAGCTGGAGAATCCTGAATCACCCAAATAGTCTACTT
GCTAGGGTGTTGAGAGGCAAATATTTCCATCATAACAACTTTCTGGAAGCTGTTGGGTTTTATGTCCTAAAACTCGTAGATAGTAAATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGAGAAATGGGAGCGTTTGCCTGTCAACGTGGGGAGGATATCACGAGAGTGTGCCTTAAAATTCTCAACGAAGAAGAGGATATAGGCCCTCTTAATAACACATG
GATCGCTTTAATCCCAAAGGTCAACAAGCCAGACAAAATGGAAAAGTTTAGGCCAATTAGTTTGTGCAGCGTGATTTACAAGATCATATCCAAAGTGCTTGCAAACAAAA
TGAAAAGAATGATGGATTCCATTATTTCCCATATTCAGGCTGCTTTCATCCCGGTCGTGGCCAAGCTTGGCTTTGAAGAAGGCTGGATCAAGAAGATTATGAGATGTGTT
GAGACAGTGAAGTTCTTAGTTTTGATCAATGGGGTTCCTTCAAATTATTTTGCGTCTAGTAGAGATGACAGTCTTATTTTTTATAGAGCAACCGCCAAGGATTGTGAATC
TGTCAAGCGGATATTGAAAGAATATGAAGATGTTTCGGGCCATACTATAAATTTCGATAAGTCCTCTTGTATGATAAGCAAAAACATCAACAAAGATAGAGCGTTGGAGT
TAAGCAAGATATTGGGTGTTAGACTCTCGGATTCCATTGGGGATTACCTTGGCATGCCTTCTCAGACGGGCCGAAAGAAAAACAAGGTGTTATGGAAGGTGAAAGATAGA
GTTTGGAAAGTTCTTCAGGGTTGGAAAGGAAGTCTGTTCTCGATGGGCGGTAAGGAAGTCTTGATCAATGCAGTGGCCCAGGCTATCCCCACTTACACAATGAGTTGTTT
TAAGCTTCCCCAGTCGATGTGCAACGAGATAAACAAATTGTGCTCTAAGTTCTGGTGGGGATTGTCGGGAGAAAATAACAGAGCCCACTGGATGAGTTGGAAGAGGCTTT
ACATAATCAAAGATAGGGGAGGTATGGGCTTCAGGGACATAAACTTATTCAATCAAGTCATGCTCGCTAAGCAAAGCTGGAGAATCCTGAATCACCCAAATAGTCTACTT
GCTAGGGTGTTGAGAGGCAAATATTTCCATCATAACAACTTTCTGGAAGCTGTTGGGTTTTATGTCCTAAAACTCGTAGATAGTAAATGTTAA
Protein sequenceShow/hide protein sequence
MRREMGAFACQRGEDITRVCLKILNEEEDIGPLNNTWIALIPKVNKPDKMEKFRPISLCSVIYKIISKVLANKMKRMMDSIISHIQAAFIPVVAKLGFEEGWIKKIMRCV
ETVKFLVLINGVPSNYFASSRDDSLIFYRATAKDCESVKRILKEYEDVSGHTINFDKSSCMISKNINKDRALELSKILGVRLSDSIGDYLGMPSQTGRKKNKVLWKVKDR
VWKVLQGWKGSLFSMGGKEVLINAVAQAIPTYTMSCFKLPQSMCNEINKLCSKFWWGLSGENNRAHWMSWKRLYIIKDRGGMGFRDINLFNQVMLAKQSWRILNHPNSLL
ARVLRGKYFHHNNFLEAVGFYVLKLVDSKC