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Lag0004814 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004814
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChitin-binding type-2 domain-containing protein
Genome locationchr6:7357984..7358910
RNA-Seq ExpressionLag0004814
SyntenyLag0004814
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8597368.1 hypothetical protein GDO81_002266 [Engystomops pustulosus]5.0e-0833.99Show/hide
Query:  LGRRWDFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNFPGPLFKRRG
        + R   F GP   R GH        G S+ R R+FPGP   R  H        G S+ R R+FP P   R GH        G S+ R R+F GP   R G
Subjt:  LGRRWDFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNFPGPLFKRRG

Query:  HPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSS
        H       LG S+ R G+FP                 G S+ R G+FP  S S
Subjt:  HPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSS

KDR22633.1 hypothetical protein L798_12765, partial [Zootermopsis nevadensis]5.5e-0740.74Show/hide
Query:  GHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNF-PGPLFKRRGHPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLG
        G P+G Y   G S GRP  FP       G P G Y   G S G P  F  GP     G P+G Y   G S GRPG FPS  S     P       G S G
Subjt:  GHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNF-PGPLFKRRGHPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLG

Query:  RPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPS
         PG F S  S     P       G S GRPG FPS
Subjt:  RPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPS

XP_015472393.2 basic proline-rich protein-like, partial [Parus major]7.7e-0935Show/hide
Query:  PGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYT
        PGP     G P  A  L G++   PR  PGPL K  G P       G   G P   P PL K  G P      LGK+LG PR  PGPL K  G P     
Subjt:  PGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYT

Query:  LLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG
        LLG   G PG  P          G+ T   G + G  G  P L        G      GK+ G PG+ P    ++   PG
Subjt:  LLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG

XP_021913216.1 collagen alpha-1(I) chain-like [Zootermopsis nevadensis]1.5e-1241.99Show/hide
Query:  SLGRRWDFP-GPLFKRRGHPRGAYTLLGKSLGRPRNFP-GPLFKRRGHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNFP-GPLF
        S G    FP GP     G  +G Y   G S GRP  FP GP     G P+G Y   G S GRP  FP       G P G Y   G S GRP  FP GP  
Subjt:  SLGRRWDFP-GPLFKRRGHPRGAYTLLGKSLGRPRNFP-GPLFKRRGHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNFP-GPLF

Query:  KRRGHPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPS
           G P+G Y   G S G PG FPS  S  +   G  +   G S GRPG FPS  S     P       G S GRPG FPS
Subjt:  KRRGHPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPS

XP_030053253.1 corneodesmosin [Microcaecilia unicolor]5.1e-0533.05Show/hide
Query:  GAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWEKAWGGLGSS
        G+  + G S    G  PS SS  I +PG  ++++G S G  G  PS SS  I +PG  ++ +G S G  G  PS SS ++ + G  +     +    G S
Subjt:  GAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWEKAWGGLGSS

Query:  RASLQASSSSQGCVHSSG
         + +   S S   VH SG
Subjt:  RASLQASSSSQGCVHSSG

TrEMBL top hitse value%identityAlignment
A0A067RI20 Chitin-binding type-2 domain-containing protein (Fragment)2.7e-0740.74Show/hide
Query:  GHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNF-PGPLFKRRGHPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLG
        G P+G Y   G S GRP  FP       G P G Y   G S G P  F  GP     G P+G Y   G S GRPG FPS  S     P       G S G
Subjt:  GHPRGAYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNF-PGPLFKRRGHPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLG

Query:  RPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPS
         PG F S  S     P       G S GRPG FPS
Subjt:  RPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPS

A0A6P7XL68 corneodesmosin2.5e-0533.05Show/hide
Query:  GAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWEKAWGGLGSS
        G+  + G S    G  PS SS  I +PG  ++++G S G  G  PS SS  I +PG  ++ +G S G  G  PS SS ++ + G  +     +    G S
Subjt:  GAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWEKAWGGLGSS

Query:  RASLQASSSSQGCVHSSG
         + +   S S   VH SG
Subjt:  RASLQASSSSQGCVHSSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCGAGCCTCGTTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCC
TTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCGTTGGGATTTCCCAGGGCCTCTCT
TCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGT
GCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGTGCCTCTCTTCAAACGTCGTGGTCATCCCATGGGTGCGTACACTCTTCTGGGGAAAAGCTT
GGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCC
TCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGTACACTCTTATGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCA
GGGGTGCGAACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGAAAA
AGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAATATGTATGCTCAAACTGCCTTCTATCA
TATTTCCACACAATTTTGATGGCATATCAAGCAACAAAGTATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCGAGCCTCGTTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCC
TTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCGTTGGGATTTCCCAGGGCCTCTCT
TCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGT
GCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGTGCCTCTCTTCAAACGTCGTGGTCATCCCATGGGTGCGTACACTCTTCTGGGGAAAAGCTT
GGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCC
TCTCTTCAAGCTGCATAGTCATCCCAGGGGTGCGTACACTCTTATGGGGAAAAAGCTTGGGGAGGCCTGGGAATTTCCCAAGCCTCTCTTCAAGCTGCATAGTCATCCCA
GGGGTGCGAACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGAAAA
AGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAATATGTATGCTCAAACTGCCTTCTATCA
TATTTCCACACAATTTTGATGGCATATCAAGCAACAAAGTATTTTAA
Protein sequenceShow/hide protein sequence
MRSSLVSPSLVCLPHSWTHVRILGLRSDYRTQSSPIPCLMVGLSLGMRTSTFPAWLEKFEGSLGRRWDFPGPLFKRRGHPRGAYTLLGKSLGRPRNFPGPLFKRRGHPRG
AYTLLGKSLGRPRNFPVPLFKRRGHPMGAYTLLGKSLGRPRNFPGPLFKRRGHPRGAYTLLGKSLGRPGNFPSLSSSCIVIPGVRTLLWGKSLGRPGNFPSLSSSCIVIP
GVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWEKAWGGLGSSRASLQASSSSQGCVHSSGEICMLKLPSIIFPHNFDGISSNKVF