; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004822 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004822
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase subunit beta
Genome locationchr6:7460453..7476090
RNA-Seq ExpressionLag0004822
SyntenyLag0004822
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0009561 - megagametogenesis (biological process)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0032549 - ribonucleoside binding (molecular function)
InterPro domainsIPR007120 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR007642 - RNA polymerase Rpb2, domain 2
IPR007645 - RNA polymerase Rpb2, domain 3
IPR009674 - DNA-directed RNA polymerase I subunit RPA2, domain 4
IPR015712 - DNA-directed RNA polymerase, subunit 2
IPR037033 - DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR037034 - RNA polymerase Rpb2, domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020194.1 DNA-directed RNA polymerase I subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]0.0e+0095.35Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSF+DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI+ASLTSCYSDKHEKGKGAVGTQLV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEG+ KEK STIADAV KNYI VHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIY+KEKLEDWLQK KKLLQDE+SDSSKNFDFCSLA VKKVMDKNPSKQIS+A++N+LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF+SHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIR SILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        YISS EVEKVVAHLR+LKVSS HV+P+DLEVGYVPLSICGAYPGL+LFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVV NLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

XP_022131547.1 DNA-directed RNA polymerase I subunit 2 [Momordica charantia]0.0e+0095.17Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFW+QG+EYLLP+GVVLKALIDTTDHEIYASLTSCYSDKH KGKGAVGTQLV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVL++YI VHLDNNYDKFNLLIFMAQKLFSL+DQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIYLKEKLEDWLQKAKKLLQDEI+D+SKNFDFCSLAHVKKVMDKNPSKQIS+AVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIR SILSVL+AVGMIPSLPKLVQMGPPDVLNV+LDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        Y+SSSEVEKVVAHLR+LKV+SSHV+P+DLEVGYVPLSICGAYPGLYLFTSPSRF+RPV+NLSIS+EEN NIE IGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQA+QFRADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

XP_038886021.1 DNA-directed RNA polymerase I subunit 2 isoform X1 [Benincasa hispida]0.0e+0095.53Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKH KGKGAVGT+LV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEK+STIADAVLK YI VHLDNNYDKFNLLIFMAQKLFSL+DQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIYLKEKLEDWLQK KKLLQDEIS+ +KNF+FCSLAHVKKVMDKNPSKQIS AVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNV+LDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        YISSSEVEK+VAHLRRLKV SSHV+P+DLEVGYVPLSI GAYPGLYLFTSPSRF+RPV+NLSISSE+NQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAI++RADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

XP_038886022.1 DNA-directed RNA polymerase I subunit 2 isoform X2 [Benincasa hispida]0.0e+0095.53Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKH KGKGAVGT+LV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEK+STIADAVLK YI VHLDNNYDKFNLLIFMAQKLFSL+DQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIYLKEKLEDWLQK KKLLQDEIS+ +KNF+FCSLAHVKKVMDKNPSKQIS AVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNV+LDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        YISSSEVEK+VAHLRRLKV SSHV+P+DLEVGYVPLSI GAYPGLYLFTSPSRF+RPV+NLSISSE+NQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAI++RADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

XP_038886023.1 DNA-directed RNA polymerase I subunit 2 isoform X3 [Benincasa hispida]0.0e+0095.53Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKH KGKGAVGT+LV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEK+STIADAVLK YI VHLDNNYDKFNLLIFMAQKLFSL+DQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIYLKEKLEDWLQK KKLLQDEIS+ +KNF+FCSLAHVKKVMDKNPSKQIS AVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNV+LDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        YISSSEVEK+VAHLRRLKV SSHV+P+DLEVGYVPLSI GAYPGLYLFTSPSRF+RPV+NLSISSE+NQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAI++RADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

TrEMBL top hitse value%identityAlignment
A0A1S3BCJ8 DNA-directed RNA polymerase subunit beta1.2e-30994.45Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDT DHEIYASLTSCYSDKH K KGAV TQLV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFD RQCL+HIGQHFQPVMEGLGKEKFST+ADAVLKNYI VHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        IT+YLKEKLEDWLQK+KKLL+DEIS+ SKNF+FCSLAHVKKVMDKNPSKQIS+AVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDF+KIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNV+LDGR+VG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        YISS+EVEKVVAHLRRLKV S HV+PDDLEVGYVPLSI GAYPGLYLFTSPSRFVRPV+NLSIS E+N NIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAI++RADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

A0A6J1BRB2 DNA-directed RNA polymerase subunit beta0.0e+0095.17Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFW+QG+EYLLP+GVVLKALIDTTDHEIYASLTSCYSDKH KGKGAVGTQLV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVL++YI VHLDNNYDKFNLLIFMAQKLFSL+DQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIYLKEKLEDWLQKAKKLLQDEI+D+SKNFDFCSLAHVKKVMDKNPSKQIS+AVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIR SILSVL+AVGMIPSLPKLVQMGPPDVLNV+LDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        Y+SSSEVEKVVAHLR+LKV+SSHV+P+DLEVGYVPLSICGAYPGLYLFTSPSRF+RPV+NLSIS+EEN NIE IGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQA+QFRADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

A0A6J1GH05 DNA-directed RNA polymerase subunit beta0.0e+0095.17Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSF+DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI+ASLTSCYSDKHEKGKGAVGTQLV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEG+ KEK STIADAV KNYI VHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIY+KEKLEDWLQK KKLLQDE+SDSSKNFDFCSLA VKKVMDKNPSKQIS+A++N+LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF+SHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIR SILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        YISS EVEKVVAHLR+LKVSS HV+P+DLEVGYVPLSICGAYPGL+LFTSPSRFVRPVRNLSISSEEN NIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVV NLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

A0A6J1GI72 DNA-directed RNA polymerase subunit beta0.0e+0095.17Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSF+DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI+ASLTSCYSDKHEKGKGAVGTQLV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEG+ KEK STIADAV KNYI VHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIY+KEKLEDWLQK KKLLQDE+SDSSKNFDFCSLA VKKVMDKNPSKQIS+A++N+LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF+SHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIR SILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        YISS EVEKVVAHLR+LKVSS HV+P+DLEVGYVPLSICGAYPGL+LFTSPSRFVRPVRNLSISSEEN NIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVV NLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

A0A6J1KKK5 DNA-directed RNA polymerase subunit beta0.0e+0094.99Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        MSMVRNSF+DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWV+GKEYLLPIGVVLKALIDTTDHEI+ASLTSCYSDKHEKGKGAVGTQLV E
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
        RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEG+ KEK STIADAV KNYI VHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV LPGQL
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
        ITIY+KEKLEDWLQK KKLLQDE+SDSSKNFDFCSLA VKKVMDKNPSKQIS+A++N+LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF+SHFRAVHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
        ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIR SILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVG

Query:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
        YISS EVEKVVAHLR+LKV S HV+P+DLEVGYVPLSICGAYPGL+LFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA
Subjt:  YISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPA

Query:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        THEEIHPTGMLSVV NLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
Subjt:  THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

SwissProt top hitse value%identityAlignment
F4I366 DNA-directed RNA polymerase I subunit 23.1e-24170.79Show/hide
Query:  SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCER
        SM+RNSF DR+EGY+ KAVV RCVR+DQSSVTVKLYYLRNGSAR+GFW+ G+EYLLP+G+VLKAL ++ D EIY SL  CYS+ + +G GA+GTQLV ER
Subjt:  SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCER

Query:  AKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLI
        AKIILDEVRDL LF   QC +H+GQHFQPV++G+ KE  S +A+AVL++Y+ VHLDN++DKFNLLIF+ QKL+SL+DQTS+PDNPDSLQNQ++ +PG +I
Subjt:  AKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLI

Query:  TIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGA
        TIYLKEKLE+WL+K K LL+DE+ +++  F F SLA VKK+++KNP + I  ++E +LKTG L TQ+GLDLQQRAG+TVQAERLNFLRF+S FRAVHRGA
Subjt:  TIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGA

Query:  SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGY
        SFAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNH+T T RITS F+S+G +RDF KIR S++ VL   GM+PSLPKLV+ GPP V++V+LDG++VG 
Subjt:  SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGY

Query:  ISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPAT
        +SS+ V KVV+++RRLKV +  V+P+DLEVGYVP S+ G+YPGLYL + P+RF+RPV+N+SI S+   NIELIGPFEQVFMEI CPDGG+GGR +   AT
Subjt:  ISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPAT

Query:  HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        HEEIHPTGM+SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S QA+QFRADQK+YHLQ
Subjt:  HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

O74633 DNA-directed RNA polymerase I subunit RPA21.4e-10838.13Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        +++VR SF +R   YT   +++R VR D++S T  L+YL +G+    F  +  EYL+P+ +++KAL++T D EI+  L         + KG   T L  +
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL-------DNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQD
        R +++L   +   L+   Q   ++GQ F+ V+          +    L+  +LVHL         + DKFN+L+FM +KL++L+      DNPD++QNQ+
Subjt:  RAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL-------DNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQD

Query:  VQLPGQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKK---VMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF
        + L G L    +KE+LE+ L  + +    +    +    F S   +K     + +  ++ I  ++E  L TG LV+ +GLDLQQ +GFTV AE+LNFLRF
Subjt:  VQLPGQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKK---VMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRF

Query:  VSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVL-IAVGMIPSLPKLVQMGPPDV
        +SHFR VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNHL   C+I +             +  S +S L   +G++     +      + 
Subjt:  VSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVL-IAVGMIPSLPKLVQMGPPDV

Query:  LNVILDGRIVGYISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDG
        + V+LDGRIVG+ +  E + +   LR  KV+  + VP  LE+GYVP S  G+YPGLY+ + P+R VRPV+ L +  E     + +GP EQ +M I C + 
Subjt:  LNVILDGRIVGYISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDG

Query:  GDGGRKDEFP--ATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQA----ILDHPGIQGADEDNRAERWTKEA
             ++  P  +TH E  PT +LS++AN+TP+SD NQSPRNMYQCQM KQTM     A+  R D K+Y LQ     ++  P       DN         
Subjt:  GDGGRKDEFP--ATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQA----ILDHPGIQGADEDNRAERWTKEA

Query:  KLTSGTGQDRRGQVFGPTPCSASAHGRGRAQG
         + S TG D    +      + SAH RG   G
Subjt:  KLTSGTGQDRRGQVFGPTPCSASAHGRGRAQG

P22138 DNA-directed RNA polymerase I subunit RPA1352.4e-10841.31Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        M+++R SF++R   Y+   + IR VR DQ+S T  L+YL +G     F  +  EYL+P+ ++LKAL  T+D EI+  +              V    + +
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILD--EVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL--DNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQL
        R +++L   + R   L +  Q L+++G  F+ V +    +    +   VL   +LVHL  D + DKF +L+FM +KL+SL+     PDNPD+ Q+Q+V L
Subjt:  RAKIILD--EVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL--DNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQL

Query:  PGQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRA
         G L  + LKEK++++LQ     ++ +I +     +F    ++ +V+    ++ I + ++  L TG LV+Q+GLDLQQ +G+TV AE++NF RF+SHFR 
Subjt:  PGQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRA

Query:  VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDG
        VHRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH    CRI++    Q  V       + I S+L ++G+ P+         P +  V +DG
Subjt:  VHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDG

Query:  RIVGYISSSEVEKVVAHLRRLKV-SSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRK
        +I+G++S  + + +   LR  KV   +  +P DLE+GYVP S  G YPGLYLF   SR +RPVR L +  E     +++GPFEQV+M I           
Subjt:  RIVGYISSSEVEKVVAHLRRLKV-SSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRK

Query:  DEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
             TH E  PT +LS++ANLTP+SD NQSPRNMYQCQM KQTM     A+  R+D KLY LQ
Subjt:  DEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

Q75DS1 DNA-directed RNA polymerase I subunit RPA21.2e-11242.2Show/hide
Query:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE
        M+++R SF++R   Y+   V IRCVR DQ+S T  L+YL +G     F  +  EYL+P+ ++LKAL D +D EI+  +                   + +
Subjt:  MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCE

Query:  RAKIILD--EVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL-DNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLP
        R +++L   + R   L + RQ L+++G  F+ V++         +   +L+  +LVHL D N DK N+L+FM +KL+SL+     PDNPD+ Q+Q+V L 
Subjt:  RAKIILD--EVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL-DNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLP

Query:  GQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAV
        G L  + +KEK+E++LQ  K  +Q ++ +     DF    ++ +V+ +  ++ I + ++  L TG LV+Q+GLDLQQ +G+TV AE++NF RF+SHFR V
Subjt:  GQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAV

Query:  HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGR
        HRG+ FA L+TTTVRKLLPESWGFLCPVHTPDG PCGLLNH    C+I++   +Q  V       + I ++L ++G+ P+    V    P +  V LDG+
Subjt:  HRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGR

Query:  IVGYISSSEVEKVVAHLRRLKV-SSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKD
        IVG+ S  +   V   LR  KV   +  +P DLE+GYVP S  G YPGLYLF   SR +RPVR L +  +     +++GPFEQV+M+I            
Subjt:  IVGYISSSEVEKVVAHLRRLKV-SSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKD

Query:  EFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQA
            TH E  PT +LS++ANLTP+SD NQSPRNMYQCQM KQTM     A+  R+D KLY LQ+
Subjt:  EFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQA

Q9P7X8 Probable DNA-directed RNA polymerase I subunit RPA21.4e-11641.62Show/hide
Query:  SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCER
        +++R SF++R   Y+   + IRCVR DQSS+T  L+YL NG     F  +  EYL+P  ++LKAL++T+D EI+  +          GK  +G   + +R
Subjt:  SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCER

Query:  AKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFST-IADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL
         +++L   +   L+   + L+++G  F+ V+ G+ ++     +   +L+  +LVHL    DKF LL+FM +KL++L+      DNPDS Q+Q++ L G L
Subjt:  AKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFST-IADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQL

Query:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG
            LKEK+EDWL   +  +  ++  S+   DF    ++ +V  K  +  I   ++  L TG LV+ TGLDLQQ  G+TV AE+LNF RF+SHFR VHRG
Subjt:  ITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRG

Query:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLN-------VI
        A FA L+TTTVRKLLPE+WGF+CPVHTPDG PCGLLNHL   C I ++ +                     V  IPSL   + + PP V+        V 
Subjt:  ASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLN-------VI

Query:  LDGRIVGYISSSEVEKVVAHLRRLKV-----------SSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFM
        LDG+IVG+ +    + V   LR +K+           +    VP DLE+GYVP S  G YPGLYLF++P+R VRPV+++S        ++++GPFEQV+M
Subjt:  LDGRIVGYISSSEVEKVVAHLRRLKV-----------SSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFM

Query:  EIRCPDGGDGGRKDEFP--ATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        +I C        K+  P  +TH E  PT +LS+VAN+TP+SD NQSPRNMYQCQM KQTM     A+++R D KLY LQ
Subjt:  EIRCPDGGDGGRKDEFP--ATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

Arabidopsis top hitse value%identityAlignment
AT1G29940.1 nuclear RNA polymerase A22.2e-24270.79Show/hide
Query:  SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCER
        SM+RNSF DR+EGY+ KAVV RCVR+DQSSVTVKLYYLRNGSAR+GFW+ G+EYLLP+G+VLKAL ++ D EIY SL  CYS+ + +G GA+GTQLV ER
Subjt:  SMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCER

Query:  AKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLI
        AKIILDEVRDL LF   QC +H+GQHFQPV++G+ KE  S +A+AVL++Y+ VHLDN++DKFNLLIF+ QKL+SL+DQTS+PDNPDSLQNQ++ +PG +I
Subjt:  AKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLI

Query:  TIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGA
        TIYLKEKLE+WL+K K LL+DE+ +++  F F SLA VKK+++KNP + I  ++E +LKTG L TQ+GLDLQQRAG+TVQAERLNFLRF+S FRAVHRGA
Subjt:  TIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGA

Query:  SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGY
        SFAGLRTTTVRKLLPESWGFLCPVHTPDG PCGLLNH+T T RITS F+S+G +RDF KIR S++ VL   GM+PSLPKLV+ GPP V++V+LDG++VG 
Subjt:  SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGY

Query:  ISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPAT
        +SS+ V KVV+++RRLKV +  V+P+DLEVGYVP S+ G+YPGLYL + P+RF+RPV+N+SI S+   NIELIGPFEQVFMEI CPDGG+GGR +   AT
Subjt:  ISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPAT

Query:  HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ
        HEEIHPTGM+SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S QA+QFRADQK+YHLQ
Subjt:  HEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHLQ

AT3G18090.1 nuclear RNA polymerase D2B2.0e-0922.02Show/hide
Query:  DAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMD
        D  L+ Y+   L     K   L +M + L S        +N DS +N+ ++L G+L+   ++  L    +K  + +Q ++S          L  ++  +D
Subjt:  DAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMD

Query:  KNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCR
           +  I+  +     TG   +     +++ +G      R N L+ +   R   +   + G +    R   P  WG +C + TPDGE CGL+ +++    
Subjt:  KNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCR

Query:  ITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSSE--VEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAY
        +    ++QG          S++ +L   GM   L             V+L+G  VG  + SE  V ++ +  R+ ++     +  D +   V        
Subjt:  ITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSSE--VEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAY

Query:  PGLYLFTSPSRFVRP---VRNLSISSEENQN------------IELIGPFEQVFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSP
            +FT   R +RP   V NL    ++               +ELIG  E+   +     G     K+    TH E+  + +L V   + P+++H+   
Subjt:  PGLYLFTSPSRFVRP---VRNLSISSEENQN------------IELIGPFEQVFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSP

Query:  RNMYQCQM-AKQTMAFSLQAIQFRAD---QKLYHLQ
        R +YQ Q   +Q + FS      R D   Q+L++ Q
Subjt:  RNMYQCQM-AKQTMAFSLQAIQFRAD---QKLYHLQ

AT3G23780.1 nuclear RNA polymerase D2A9.9e-0922.48Show/hide
Query:  DAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMD
        D  L  Y+   L +   K   L +M + L +        +N DS +N+ ++L G+L+   ++  L    +K  + +Q  +S          L  ++  +D
Subjt:  DAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDWLQKAKKLLQDEISDSSKNFDFCSLAHVKKVMD

Query:  KNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCR
           +  I+  +     TG   +     +++ +G      R N L+ +   R   +   + G +    R   P  WG +C + TPDGE CGL+ +++    
Subjt:  KNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCR

Query:  ITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQ--MGPPDVLNVILDGRIVGYISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAY
        +++            +   S++  L A GM   +        G   VL   L+G  VG  + S  E  VA L+  +  S   +P ++E+           
Subjt:  ITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQ--MGPPDVLNVILDGRIVGYISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICGAY

Query:  PGLYLFTSPSRFVRP---VRNLSISSEENQN------------IELIGPFEQVFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSP
          + +FT   R +RP   V NL    +E  +            +ELIG  E+   +     G     K+    TH E+  + +L V   + P+++H+   
Subjt:  PGLYLFTSPSRFVRP---VRNLSISSEENQN------------IELIGPFEQVFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSP

Query:  RNMYQCQM-AKQTMAFSLQAIQFRAD---QKLYHLQ
        R +YQ Q   +Q + FS      R D   Q+L++ Q
Subjt:  RNMYQCQM-AKQTMAFSLQAIQFRAD---QKLYHLQ

AT4G21710.1 DNA-directed RNA polymerase family protein3.8e-1622.74Show/hide
Query:  LPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCERAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL
        +PI +V +AL    D +I   +   ++D          TQ++ E  +  L+E     + +    L++IG+    V  G+ KEK    A  +L+  +L H+
Subjt:  LPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCERAKIILDEVRDLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL

Query:  ----DNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDWLQKAKKLLQDEISDSSK-NFDFCSLAHVKKVMDKNPSKQI
                 K     ++  +L          D+ D   N+ + L G L+    +       +  +  +Q  + +  + N  F   A           K I
Subjt:  ----DNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDWLQKAKKLLQDEISDSSK-NFDFCSLAHVKKVMDKNPSKQI

Query:  SAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRIT----S
        ++ ++  L TG            RAG +    RL +   +SH R ++      G +    R+L    WG +CP  TP+G+ CGL+ +L     IT    +
Subjt:  SAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRIT----S

Query:  Y----FNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSSEVEKVVAHLRRLK----VSSSHVVPDDLEVG----YVP
        Y    F  +    +F +I  S++                    P    + ++G  VG     + + +V  LRRL+    V++   V  D+ +     Y  
Subjt:  Y----FNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSSEVEKVVAHLRRLK----VSSSHVVPDDLEVG----YVP

Query:  LSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQN------------IELIGPFEQ--VFMEIRCPDGGDGGRKDEFP----ATHEEIHPTGMLSVVANL
           C     L++  +    ++     ++   E+              IE I   E+    + +   D      + E       TH EIHP+ +L V A++
Subjt:  LSICGAYPGLYLFTSPSRFVRPVRNLSISSEENQN------------IELIGPFEQ--VFMEIRCPDGGDGGRKDEFP----ATHEEIHPTGMLSVVANL

Query:  TPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHL
         P+ DHNQSPRN YQ  M KQ M   +   QFR D   Y L
Subjt:  TPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHL

AT5G45140.1 nuclear RNA polymerase C21.2e-2526.51Show/hide
Query:  RQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL---DNNYDK--FNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDW
        +Q L+++    + +  G   EK    A ++L++  L H+   DNN+ +  F + + + + + +++++ ++ D+ D + N+ ++L GQLI++  ++  +  
Subjt:  RQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHL---DNNYDK--FNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDW

Query:  LQKAKKLLQDEISD--SSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTT
        L +A K +   ++    +  FDF       + ++K+    IS  +E  L TG    +       R G T    RL+F+  +     +     F   R  +
Subjt:  LQKAKKLLQDEISD--SSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTT

Query:  -VRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSSEVEK
          R L P  WG LCP  TP+GE CGL+ +L     +T+       V   +K+  + L VL A           ++  PD   VIL+G I+G    S  + 
Subjt:  -VRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSSEVEK

Query:  VVAHLRRLKVS-------------SSHVVPDDLEVGYV--PLSICG-------------AYPGLYLFTSPSRFVRP--VRNLSISSEENQNIELIGPFEQ
            LRRL+ +               H V    +VG V  PL I                  G+  F     F+R   +  L ++ E N  I L      
Subjt:  VVAHLRRLKVS-------------SSHVVPDDLEVGYV--PLSICG-------------AYPGLYLFTSPSRFVRP--VRNLSISSEENQNIELIGPFEQ

Query:  VFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHL
          ++    +G +  + D    TH EI P  +L VVA L P+  HNQSPRN YQC M KQ M         R D  LY L
Subjt:  VFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFRADQKLYHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATGGTGAGGAATTCATTTTCTGATCGTCGGGAAGGTTATACAGATAAAGCAGTGGTTATAAGGTGTGTAAGAGAAGATCAATCTTCAGTAACAGTCAAACTATA
TTATCTTAGGAATGGAAGTGCCAGACTTGGATTTTGGGTTCAGGGAAAGGAGTACTTGCTTCCCATAGGGGTTGTCCTAAAGGCCCTAATTGACACAACCGACCATGAAA
TTTATGCAAGTCTTACAAGCTGTTATAGTGATAAACATGAAAAGGGTAAGGGTGCTGTTGGAACTCAGCTTGTTTGTGAAAGGGCAAAGATTATTCTTGATGAAGTTCGG
GACCTGGCACTATTTGATCATCGTCAATGTCTAGAGCATATAGGACAACACTTCCAGCCAGTCATGGAGGGGTTGGGAAAAGAAAAATTTTCTACTATTGCAGATGCAGT
TCTCAAAAACTACATACTTGTTCACCTCGACAACAATTATGACAAGTTTAATCTGCTCATTTTTATGGCGCAAAAACTTTTCTCCCTTATAGATCAGACGTCTGTCCCTG
ACAACCCGGATTCCTTGCAAAACCAGGACGTTCAGCTGCCTGGTCAACTGATTACTATTTATCTCAAGGAGAAACTAGAAGACTGGTTGCAAAAGGCGAAAAAGCTTCTT
CAAGATGAAATTAGCGATTCCAGTAAAAACTTTGATTTCTGCAGCTTAGCTCATGTCAAGAAGGTCATGGACAAGAATCCATCAAAACAGATTAGTGCGGCTGTTGAAAA
TATGCTGAAAACTGGAAGACTTGTTACACAAACAGGCCTAGATCTGCAGCAGAGGGCAGGCTTTACAGTTCAGGCAGAACGACTTAATTTCTTGCGCTTTGTGTCTCATT
TTCGTGCTGTTCATCGTGGAGCTTCATTTGCTGGACTTCGTACCACGACAGTGCGGAAATTGCTACCTGAGTCTTGGGGTTTTCTTTGTCCAGTTCACACTCCTGATGGT
GAACCATGTGGTTTGCTGAATCATTTAACCAGCACTTGCAGAATTACATCATACTTCAATTCTCAAGGAAAAGTTAGAGATTTTTTCAAAATAAGGACGTCTATTCTGAG
TGTTCTAATTGCAGTTGGAATGATACCATCCCTACCGAAGCTTGTTCAGATGGGTCCTCCTGATGTTCTTAATGTTATTTTAGATGGTCGTATTGTTGGTTATATATCAT
CCAGTGAAGTAGAGAAAGTTGTTGCTCATTTACGACGATTAAAAGTTTCATCTTCCCACGTGGTTCCTGACGATCTGGAAGTTGGATATGTACCATTGAGTATATGTGGA
GCGTATCCTGGTCTATACCTTTTCACATCTCCTTCTAGATTTGTTCGACCTGTTAGAAATCTTTCAATCTCTTCCGAGGAAAATCAAAATATTGAACTCATTGGACCATT
TGAACAGGTATTTATGGAAATAAGATGTCCTGATGGGGGTGATGGTGGCAGGAAAGATGAGTTTCCTGCGACACATGAAGAAATCCATCCAACTGGGATGCTCAGTGTGG
TTGCTAATCTTACCCCTTGGTCCGATCACAATCAGAGCCCACGAAATATGTACCAATGCCAGATGGCAAAACAAACAATGGCATTTTCTCTGCAAGCTATTCAGTTCCGT
GCAGACCAAAAACTATACCATCTTCAGGCAATTTTGGACCACCCCGGTATACAAGGAGCTGACGAGGACAATCGGGCTGAGAGATGGACCAAGGAGGCAAAACTGACAAG
TGGGACGGGCCAAGACCGAAGGGGTCAGGTTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCATGGCAGAGGTCGAGCACAAGGTCGGCCGAGGTCGAGCCCGTCTGGCG
CCGTTAGGTCCCTACCGCCTCCGTCTGTCCCGGTTTTGCCTGGCCACGTCTTCCCCCTCTTCTACAAATTTTACCGTTGGTGGCACGCGAAGGTCAGATCTCGTGAAGTT
CCAGCCGCAGCTCACGAAGACCCGCCAGTTCGTTGGCGACCGCGAAGACTTCCTTTTCGTCGCTCGCAAAGACCCACTCGCCGTCGCACGCGAAGACCCGCCCGCTCGTC
GTCGCTCGCGAAGACCCGCCTGCTCGCCGTCACTCACGAAGACCCTCTCGCTGTCGCTCGCGAAGATCTTGCTCAGATCTACTTGAAACTATCGTGCTCATACCTGCTCG
AAACTATCGTGCTCAGATCTACTCGGAAGTATCGTGCTCACGAAGACTCGCCCACCGTTGCTCGCAAAGATCTTGCTCAGATCTGCTCAGAAGTATCGTGCTCAGACCCG
CCAGCTTGCTATTTGTTCCGCTCGGAAGATCTGCTCAGATCTAGCAACCTTCGTTTTAAAAAAAAAAACAGTGAAAGAATAGGAAAGAAGAGAAGAAGAAAAAAAAAAGA
GGCGGGAGACCAAAGAAAAGAGAGAAAAAAAAGGTTCTCGCCGGCGAGTGGCGGTGCCGGCGGTTGGTCGTCGGCGACTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATGGTGAGGAATTCATTTTCTGATCGTCGGGAAGGTTATACAGATAAAGCAGTGGTTATAAGGTGTGTAAGAGAAGATCAATCTTCAGTAACAGTCAAACTATA
TTATCTTAGGAATGGAAGTGCCAGACTTGGATTTTGGGTTCAGGGAAAGGAGTACTTGCTTCCCATAGGGGTTGTCCTAAAGGCCCTAATTGACACAACCGACCATGAAA
TTTATGCAAGTCTTACAAGCTGTTATAGTGATAAACATGAAAAGGGTAAGGGTGCTGTTGGAACTCAGCTTGTTTGTGAAAGGGCAAAGATTATTCTTGATGAAGTTCGG
GACCTGGCACTATTTGATCATCGTCAATGTCTAGAGCATATAGGACAACACTTCCAGCCAGTCATGGAGGGGTTGGGAAAAGAAAAATTTTCTACTATTGCAGATGCAGT
TCTCAAAAACTACATACTTGTTCACCTCGACAACAATTATGACAAGTTTAATCTGCTCATTTTTATGGCGCAAAAACTTTTCTCCCTTATAGATCAGACGTCTGTCCCTG
ACAACCCGGATTCCTTGCAAAACCAGGACGTTCAGCTGCCTGGTCAACTGATTACTATTTATCTCAAGGAGAAACTAGAAGACTGGTTGCAAAAGGCGAAAAAGCTTCTT
CAAGATGAAATTAGCGATTCCAGTAAAAACTTTGATTTCTGCAGCTTAGCTCATGTCAAGAAGGTCATGGACAAGAATCCATCAAAACAGATTAGTGCGGCTGTTGAAAA
TATGCTGAAAACTGGAAGACTTGTTACACAAACAGGCCTAGATCTGCAGCAGAGGGCAGGCTTTACAGTTCAGGCAGAACGACTTAATTTCTTGCGCTTTGTGTCTCATT
TTCGTGCTGTTCATCGTGGAGCTTCATTTGCTGGACTTCGTACCACGACAGTGCGGAAATTGCTACCTGAGTCTTGGGGTTTTCTTTGTCCAGTTCACACTCCTGATGGT
GAACCATGTGGTTTGCTGAATCATTTAACCAGCACTTGCAGAATTACATCATACTTCAATTCTCAAGGAAAAGTTAGAGATTTTTTCAAAATAAGGACGTCTATTCTGAG
TGTTCTAATTGCAGTTGGAATGATACCATCCCTACCGAAGCTTGTTCAGATGGGTCCTCCTGATGTTCTTAATGTTATTTTAGATGGTCGTATTGTTGGTTATATATCAT
CCAGTGAAGTAGAGAAAGTTGTTGCTCATTTACGACGATTAAAAGTTTCATCTTCCCACGTGGTTCCTGACGATCTGGAAGTTGGATATGTACCATTGAGTATATGTGGA
GCGTATCCTGGTCTATACCTTTTCACATCTCCTTCTAGATTTGTTCGACCTGTTAGAAATCTTTCAATCTCTTCCGAGGAAAATCAAAATATTGAACTCATTGGACCATT
TGAACAGGTATTTATGGAAATAAGATGTCCTGATGGGGGTGATGGTGGCAGGAAAGATGAGTTTCCTGCGACACATGAAGAAATCCATCCAACTGGGATGCTCAGTGTGG
TTGCTAATCTTACCCCTTGGTCCGATCACAATCAGAGCCCACGAAATATGTACCAATGCCAGATGGCAAAACAAACAATGGCATTTTCTCTGCAAGCTATTCAGTTCCGT
GCAGACCAAAAACTATACCATCTTCAGGCAATTTTGGACCACCCCGGTATACAAGGAGCTGACGAGGACAATCGGGCTGAGAGATGGACCAAGGAGGCAAAACTGACAAG
TGGGACGGGCCAAGACCGAAGGGGTCAGGTTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCATGGCAGAGGTCGAGCACAAGGTCGGCCGAGGTCGAGCCCGTCTGGCG
CCGTTAGGTCCCTACCGCCTCCGTCTGTCCCGGTTTTGCCTGGCCACGTCTTCCCCCTCTTCTACAAATTTTACCGTTGGTGGCACGCGAAGGTCAGATCTCGTGAAGTT
CCAGCCGCAGCTCACGAAGACCCGCCAGTTCGTTGGCGACCGCGAAGACTTCCTTTTCGTCGCTCGCAAAGACCCACTCGCCGTCGCACGCGAAGACCCGCCCGCTCGTC
GTCGCTCGCGAAGACCCGCCTGCTCGCCGTCACTCACGAAGACCCTCTCGCTGTCGCTCGCGAAGATCTTGCTCAGATCTACTTGAAACTATCGTGCTCATACCTGCTCG
AAACTATCGTGCTCAGATCTACTCGGAAGTATCGTGCTCACGAAGACTCGCCCACCGTTGCTCGCAAAGATCTTGCTCAGATCTGCTCAGAAGTATCGTGCTCAGACCCG
CCAGCTTGCTATTTGTTCCGCTCGGAAGATCTGCTCAGATCTAGCAACCTTCGTTTTAAAAAAAAAAACAGTGAAAGAATAGGAAAGAAGAGAAGAAGAAAAAAAAAAGA
GGCGGGAGACCAAAGAAAAGAGAGAAAAAAAAGGTTCTCGCCGGCGAGTGGCGGTGCCGGCGGTTGGTCGTCGGCGACTGGTTGA
Protein sequenceShow/hide protein sequence
MSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASLTSCYSDKHEKGKGAVGTQLVCERAKIILDEVR
DLALFDHRQCLEHIGQHFQPVMEGLGKEKFSTIADAVLKNYILVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVQLPGQLITIYLKEKLEDWLQKAKKLL
QDEISDSSKNFDFCSLAHVKKVMDKNPSKQISAAVENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDG
EPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRTSILSVLIAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSSEVEKVVAHLRRLKVSSSHVVPDDLEVGYVPLSICG
AYPGLYLFTSPSRFVRPVRNLSISSEENQNIELIGPFEQVFMEIRCPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQFR
ADQKLYHLQAILDHPGIQGADEDNRAERWTKEAKLTSGTGQDRRGQVFGPTPCSASAHGRGRAQGRPRSSPSGAVRSLPPPSVPVLPGHVFPLFYKFYRWWHAKVRSREV
PAAAHEDPPVRWRPRRLPFRRSQRPTRRRTRRPARSSSLAKTRLLAVTHEDPLAVAREDLAQIYLKLSCSYLLETIVLRSTRKYRAHEDSPTVARKDLAQICSEVSCSDP
PACYLFRSEDLLRSSNLRFKKKNSERIGKKRRRKKKEAGDQRKERKKRFSPASGGAGGWSSATG