; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004835 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004835
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr6:7591404..7591724
RNA-Seq ExpressionLag0004835
SyntenyLag0004835
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7965392.1 hypothetical protein I3843_09G221100 [Carya illinoinensis]2.0e-0436.36Show/hide
Query:  SVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSYL-DCVWIEE
        SV +AE +AL +  TL   +   +GS + E D+  +V  +     D +  G L++ ++  L      K+ FT    NKVAH+LA LAFS + + VWIEE
Subjt:  SVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSYL-DCVWIEE

RXI09039.1 hypothetical protein DVH24_023183 [Malus domestica]5.1e-0536.96Show/hide
Query:  AEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFS-YLDCVW
        AE  AL  G++ A H  F   SF  E+DSL +V+       D+S +G +++ I+ L H     K+  T CQ N +AH LA +  S   DC+W
Subjt:  AEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFS-YLDCVW

XP_010687479.1 PREDICTED: uncharacterized protein LOC104901585 [Beta vulgaris subsp. vulgaris]3.3e-0433.67Show/hide
Query:  VDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSYLDC-VWIEE
        VD+AE     +G+ +A    F   S ++E D+L+L   L     + S  G ++  I+RL+H C       T  +GN+VAH LA +  S     VW+EE
Subjt:  VDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSYLDC-VWIEE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]4.7e-0640.57Show/hide
Query:  LPQCWSVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHP-CGRGKVLFTPCQGNKVAHDLASLAFS--YLD
        L +   VD  EG+A+Y+GI LA    F    F +ETDSLR+  +L  +  D SEVG+L   I+  L     R    FT   GN  AH LA LA +  +L 
Subjt:  LPQCWSVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHP-CGRGKVLFTPCQGNKVAHDLASLAFS--YLD

Query:  CVWIEE
         +W+EE
Subjt:  CVWIEE

XP_030970589.1 uncharacterized protein LOC115990964 [Quercus lobata]2.0e-0433.33Show/hide
Query:  ELPQCWSVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSYLDC-
        +L Q +  +  E  A  K + LAF+L F +   ++E DSL L+K L  + H++S +GLL++ ++                 GN VAH+LA    S LD  
Subjt:  ELPQCWSVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSYLDC-

Query:  VWIEE
        VW+E+
Subjt:  VWIEE

TrEMBL top hitse value%identityAlignment
A0A2I4GJL1 uncharacterized protein LOC1090084478.0e-0433.33Show/hide
Query:  LAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSY-LDCVWIEE
        LAE WAL+K + +   L  S   F  E D+  ++  ++ +V D S +G +++ I++         V F P  GN+VAH LA  A     + +WIEE
Subjt:  LAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSY-LDCVWIEE

A0A498KLK8 RNase H domain-containing protein2.5e-0536.96Show/hide
Query:  AEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFS-YLDCVW
        AE  AL  G++ A H  F   SF  E+DSL +V+       D+S +G +++ I+ L H     K+  T CQ N +AH LA +  S   DC+W
Subjt:  AEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFS-YLDCVW

A0A6J1DBJ7 uncharacterized protein LOC1110189732.3e-0640.57Show/hide
Query:  LPQCWSVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHP-CGRGKVLFTPCQGNKVAHDLASLAFS--YLD
        L +   VD  EG+A+Y+GI LA    F    F +ETDSLR+  +L  +  D SEVG+L   I+  L     R    FT   GN  AH LA LA +  +L 
Subjt:  LPQCWSVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHP-CGRGKVLFTPCQGNKVAHDLASLAFS--YLD

Query:  CVWIEE
         +W+EE
Subjt:  CVWIEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATTGCCACAATGTTGGAGTGTTGATTTGGCAGAGGGGTGGGCTTTGTACAAAGGAATTACCCTTGCATTCCATTTGAGATTCTCTTCAGGTTCTTTCATGGT
GGAGACTGATTCCTTGCGGCTGGTGAAGATTCTTCATGTTGAGGTGCATGATGTTTCAGAAGTGGGATTGTTGATGGATCATATTCGTAGGCTTCTCCATCCTTGTGGTA
GGGGCAAGGTTCTGTTTACACCTTGTCAGGGAAACAAAGTGGCGCATGATTTAGCTAGCTTGGCCTTTTCGTACTTGGATTGTGTTTGGATTGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAATTGCCACAATGTTGGAGTGTTGATTTGGCAGAGGGGTGGGCTTTGTACAAAGGAATTACCCTTGCATTCCATTTGAGATTCTCTTCAGGTTCTTTCATGGT
GGAGACTGATTCCTTGCGGCTGGTGAAGATTCTTCATGTTGAGGTGCATGATGTTTCAGAAGTGGGATTGTTGATGGATCATATTCGTAGGCTTCTCCATCCTTGTGGTA
GGGGCAAGGTTCTGTTTACACCTTGTCAGGGAAACAAAGTGGCGCATGATTTAGCTAGCTTGGCCTTTTCGTACTTGGATTGTGTTTGGATTGAAGAATGA
Protein sequenceShow/hide protein sequence
MLELPQCWSVDLAEGWALYKGITLAFHLRFSSGSFMVETDSLRLVKILHVEVHDVSEVGLLMDHIRRLLHPCGRGKVLFTPCQGNKVAHDLASLAFSYLDCVWIEE