; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004843 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004843
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:7649907..7651681
RNA-Seq ExpressionLag0004843
SyntenyLag0004843
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4263564.1 unnamed protein product [Prunus armeniaca]6.0e-6833.4Show/hide
Query:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEG-------------GKEDSLVE--------------
        ++DRVW +V GW+GK  S  GKEVL+KS+ QAIP Y+M+ FRL   L  EI  ++A FWW   +G              K D  +               
Subjt:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEG-------------GKEDSLVE--------------

Query:  -----LEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTG
             LE P S  + + + K RYF  + F+ AS G  PS+ W+SLLWGRDLL  G +WRIG+G LV IY   W+P +    + S P+LP+TS V DLFT 
Subjt:  -----LEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTG

Query:  SGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLA------HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRL
        SG WD  KV + F+  ++EAIL IPL   +L D+ IW+F KNG YSVK GY  A        LS       S S+L  + W  LWK+ VP K+    WR+
Subjt:  SGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLA------HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRL

Query:  CHNRLPTKDNLLKR--------------------------AGVDKEWVVAGVGGGAVVA-------------WVPPAENELKLNVDAAVRPETREASGGF
          + LP+K+ L +R                            +D  W +      ++ A             W PP  N  KLNVD A   ET     G 
Subjt:  CHNRLPTKDNLLKR--------------------------AGVDKEWVVAGVGGGAVVA-------------WVPPAENELKLNVDAAVRPETREASGGF

Query:  VLRN----------------------EGWAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAH
        ++R+                      E +A+  GI  A  M      +E+DSL+   ++  + + ++  G ++D +R LL + +S  V   PRQ N  AH
Subjt:  VLRN----------------------EGWAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAH

Query:  TMASLAFVYANF-VWLEDWPSEASDVLSRD
         +A  +    +  +WL+  P    D +  D
Subjt:  TMASLAFVYANF-VWLEDWPSEASDVLSRD

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]5.3e-7246.45Show/hide
Query:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------
        ++DRVWK +QGWK K FS GGKEVL+K++ QAIPCYTM+CFRL K LI E H + A FWW + +  K+   V       PK                   
Subjt:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------

Query:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFT-G
                    + S VLKGRYF   SF+ A +   PSY+WRS+LWGRDLL +G +WRIGNG  V IY  NW+PN+ +L++ S P LPL S V  L    
Subjt:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFT-G

Query:  SGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLA--HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNR
         G W    VR  FT  +++ IL IP+G  + ED+LIW++EK G+YSV+ GY++A  +   VQ  PSSS S     WW+  WKM++P+K+K F WRLC +R
Subjt:  SGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLA--HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNR

Query:  LPTKDNLLKR
        LPT  NL KR
Subjt:  LPTKDNLLKR

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]7.1e-6128.45Show/hide
Query:  RVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGK---------------------------EDSLVELE-
        RV  ++  W+ KFF++GGKEVL+K++ QAIP Y M+ F++   L  +I + MA FWW   +  K                             +LV  + 
Subjt:  RVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGK---------------------------EDSLVELE-

Query:  ---IPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSGHW
           +     + + VLK RYF  T F+ A LG +PS+VWRS++WGR +L +G +WRIGNG  V +Y +NW+P   + +  S PS+   + V +L      W
Subjt:  ---IPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSGHW

Query:  DEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDN
         E  +  HF   D+EAI++IPL     ED+LIWH++K G YSVK GY++A R+   + PS S+       W  +WK+ +P KVK F WR  H+ LPT +N
Subjt:  DEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDN

Query:  LLKR-----------------------------------------AGV---DKEWVV-------AGVGGGAVVA--------------------------
        L K+                                          GV   D  W++       A V G  V A                          
Subjt:  LLKR-----------------------------------------AGV---DKEWVV-------AGVGGGAVVA--------------------------

Query:  ------------------------------WVPPAENELKLNVDAAVRPETREASGGFVLRN----------------------EGWAMLRGIQVARQMG
                                      W PP     K+NVDAAV  E + A  G V+R+                      E  AM  G++VA +  
Subjt:  ------------------------------WVPPAENELKLNVDAAVRPETREASGGFVLRN----------------------EGWAMLRGIQVARQMG

Query:  FFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAF-VYANFVWLEDWPSE
              E+DSL +  ++      ++E+G ++  I+  L+   + +   +PR  N  AH++A LA       +WL++ P E
Subjt:  FFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAF-VYANFVWLEDWPSE

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]6.0e-6027.77Show/hide
Query:  RVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNP-------------------EGGK--------EDSLVE---
        +V  ++ GW+ KF S+GGKEVL+K+  QAIP Y M+ F+L +    +I R +A FWW +                     GG           +LV    
Subjt:  RVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNP-------------------EGGK--------EDSLVE---

Query:  ---LEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSG
           L+ P S  + S VL+ RYF  +SF+ A  G   SY+WRS++WGR ++ +G +WRIGNG  + I+  NWLP   + +     SLP++S V DL     
Subjt:  ---LEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSG

Query:  HWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTK
         WDE+K+R HF   D+  IL+IPL     ED+++WH++K G YSVK GY+LA R    D  S ++++  H++WS+LW + +P K+K F WR  +N LP+ 
Subjt:  HWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTK

Query:  DNLLKRAGVD-------------------------KEW-----------------------------------------------------------VVA
        +NL KR  V+                         K W                                                           +++
Subjt:  DNLLKRAGVD-------------------------KEW-----------------------------------------------------------VVA

Query:  GVGGGAVVA-----------------------WVPPAENELKLNVDAAVRPETREASGGFVLRN----------------------EGWAMLRGIQVARQ
             +V+                        W+PP +N  K+NVDAA   +   A  G V+R+                      E  A+L G+Q+AR 
Subjt:  GVGGGAVVA-----------------------WVPPAENELKLNVDAAVRPETREASGGFVLRN----------------------EGWAMLRGIQVARQ

Query:  MGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAF-VYANFVWLEDWPSEASDVL
               +E+D L + +++ +     SE+   +  I+  ++      V   PR  N  AH +A +A    +  +WL + P+E  D +
Subjt:  MGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAF-VYANFVWLEDWPSEASDVL

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]4.6e-6040.94Show/hide
Query:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPKVSSLVLKGRYFLGTSFVGA
        +++RVW +++GWKG FFS   KEVL+K+IVQAIP YTM+CFRL K  I  IH + A FWW + E   +D+ +             VLK  Y+  +  + A
Subjt:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPKVSSLVLKGRYFLGTSFVGA

Query:  SLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLE
          G+  S+VWRSL+WG+ ++ +G +WRIGN + V +   +WLP   + +++  P LP    V DL    G WD+  VR+ F   D++ IL +P     +E
Subjt:  SLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLE

Query:  DKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKR
        DK++WH+ K+G YSV+ GYR+A  L V+D    SD+    +WW  LWK+ +P KVK F W++ H+ +PT   L  R
Subjt:  DKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKR

TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189542.5e-7246.45Show/hide
Query:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------
        ++DRVWK +QGWK K FS GGKEVL+K++ QAIPCYTM+CFRL K LI E H + A FWW + +  K+   V       PK                   
Subjt:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------

Query:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFT-G
                    + S VLKGRYF   SF+ A +   PSY+WRS+LWGRDLL +G +WRIGNG  V IY  NW+PN+ +L++ S P LPL S V  L    
Subjt:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFT-G

Query:  SGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLA--HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNR
         G W    VR  FT  +++ IL IP+G  + ED+LIW++EK G+YSV+ GY++A  +   VQ  PSSS S     WW+  WKM++P+K+K F WRLC +R
Subjt:  SGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLA--HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNR

Query:  LPTKDNLLKR
        LPT  NL KR
Subjt:  LPTKDNLLKR

A0A6J5TIF9 Reverse transcriptase domain-containing protein2.9e-6833.4Show/hide
Query:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEG-------------GKEDSLVE--------------
        ++DRVW +V GW+GK  S  GKEVL+KS+ QAIP Y+M+ FRL   L  EI  ++A FWW   +G              K D  +               
Subjt:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEG-------------GKEDSLVE--------------

Query:  -----LEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTG
             LE P S  + + + K RYF  + F+ AS G  PS+ W+SLLWGRDLL  G +WRIG+G LV IY   W+P +    + S P+LP+TS V DLFT 
Subjt:  -----LEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTG

Query:  SGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLA------HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRL
        SG WD  KV + F+  ++EAIL IPL   +L D+ IW+F KNG YSVK GY  A        LS       S S+L  + W  LWK+ VP K+    WR+
Subjt:  SGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLA------HRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRL

Query:  CHNRLPTKDNLLKR--------------------------AGVDKEWVVAGVGGGAVVA-------------WVPPAENELKLNVDAAVRPETREASGGF
          + LP+K+ L +R                            +D  W +      ++ A             W PP  N  KLNVD A   ET     G 
Subjt:  CHNRLPTKDNLLKR--------------------------AGVDKEWVVAGVGGGAVVA-------------WVPPAENELKLNVDAAVRPETREASGGF

Query:  VLRN----------------------EGWAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAH
        ++R+                      E +A+  GI  A  M      +E+DSL+   ++  + + ++  G ++D +R LL + +S  V   PRQ N  AH
Subjt:  VLRN----------------------EGWAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAH

Query:  TMASLAFVYANF-VWLEDWPSEASDVLSRD
         +A  +    +  +WL+  P    D +  D
Subjt:  TMASLAFVYANF-VWLEDWPSEASDVLSRD

A0A803NHG3 Uncharacterized protein2.0e-6439.74Show/hide
Query:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------
        +++RVW +++GWKG  FS G KEVL+K+IVQAIP YTM+C+RL K  I  IHR+ A FWW +    K+    + E    PK                   
Subjt:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------

Query:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGS
                    + S VLK  YF   S + A  G   S+VWRSL+WG++++++G +WR+GNG  V +    WLP   S +V+  P  P   CV DL   S
Subjt:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGS

Query:  GHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT
        G WDE  +R++F   D+E ILR+P  H  LEDK++WH+ +NG Y+V+ GYR+A    ++   ++ +  L  +WW  LWK+ +P KVK F W+L ++ LPT
Subjt:  GHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT

Query:  KDNLLKR
          NL+ R
Subjt:  KDNLLKR

A0A803Q0L5 Uncharacterized protein4.5e-6930.07Show/hide
Query:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------
        ++++VW +++GWK   FS  GKEVL+K++VQAIP Y M+CFRL K  I  IHR+ A FWW + E  K+    +      PK                   
Subjt:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------

Query:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGS
                    + S VLK  YF   + + A  G   S+VWRSL+WG+ +++ G +WR+GNG  V +    WLP   + +++  P LP    V D+  G 
Subjt:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGS

Query:  GHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT
        G WD + ++  F   D+E IL +P     LEDK++WH+ KNG Y+VK GY++A  L V++Q  S+D  L  +WW +LW+  +P K+K F W+L +N LPT
Subjt:  GHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT

Query:  KDNLLKRAGVDKEWVVAGV---------------------------------------------------------------------GGGAVVA-----
           L KR G  + W V+G                                                                      GGGA        
Subjt:  KDNLLKRAGVDKEWVVAGV---------------------------------------------------------------------GGGAVVA-----

Query:  ----WVPPAENELKLNVDAAVRPETREASGGFVLRNEG----------------------WAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISE
            W  P    +K+NVDA V+     +  G V+R+ G                       A+L G+QV        F +E+D L+  +++    +   +
Subjt:  ----WVPPAENELKLNVDAAVRPETREASGGFVLRNEG----------------------WAMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISE

Query:  VGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAFV-YANFVWLEDWPSEASDVLSRD
        V  ++D IR LL  DS   + F  R+ N VA+ +A+ A V  A+ +W+    S AS  LS D
Subjt:  VGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAFV-YANFVWLEDWPSEASDVLSRD

A0A803QQT2 Uncharacterized protein2.1e-6629.27Show/hide
Query:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------
        ++++VW +++GWK   FS  GKEVL+K IVQAIP YTM+CF+L K  I  +HR+ + FWW + +  K+    +      PK                   
Subjt:  MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK-------------------

Query:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGS
                    + S VLK  YF     + A  G   S+VWRSL+WG+ L+++G +WR+GNG  V +    WLP   + +V+  PSLP    V DL    
Subjt:  ------------VSSLVLKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGS

Query:  GHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT
        G WDE  +RS F   D + IL IP      EDK++WH+ K G YSVK GYR+A   + +   S+  S +  +WW  LW++ +P KVK F W++ HN LP 
Subjt:  GHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPT

Query:  KDNLLKR------------AGVDKE--------------WVVAGV-----------------------------------------------GG------
          NL KR            + VD+               W V+G+                                               GG      
Subjt:  KDNLLKR------------AGVDKE--------------WVVAGV-----------------------------------------------GG------

Query:  ------GAVVA-------------------WVPPAENELKLNVDAAVRPETREASGGFVLRN----------------------EGWAMLRGIQVARQMG
              G  +A                   WVPPA +++ +NVDA V+     +  G+V+R+                      E  A+ +GIQV  Q  
Subjt:  ------GAVVA-------------------WVPPAENELKLNVDAAVRPETREASGGFVLRN----------------------EGWAMLRGIQVARQMG

Query:  FFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAFVY-ANFVWL
           F VETD L+   ++ +  +   ++  +++ IR L+  DS   + F  R+ N VAH +A+ A V+ A+ +W+
Subjt:  FFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAFVY-ANFVWL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.4e-1923.4Show/hide
Query:  DRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK---------------------
        +RV  ++ GW+ K  S  G+  L K+++ ++P ++M+   L + ++  + +L   F W +    K+  LV+     SPK                     
Subjt:  DRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK---------------------

Query:  ----------VSSLVLKGRYFLGTSFVGASLGHRPSY--VWRSLLWG-RDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHS--FPSLPLTSCVRDLF
                  + +LVL+ +Y +G       L  + S+   WRS+  G RD++  G  W  G+G  +  +   W+  +  L++ +   P+   T   +DL+
Subjt:  ----------VSSLVLKGRYFLGTSFVGASLGHRPSY--VWRSLLWG-RDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHS--FPSLPLTSCVRDLF

Query:  TGSGHWDEVKVRSHFTMADSEAILRIPLGHL--SLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCH
             WD  K+   +T  ++   LR  +  L     D+L W F ++G +SV+  Y +   L+V + P  + ++    +++ LWK+ VP +VK F W + +
Subjt:  TGSGHWDEVKVRSHFTMADSEAILRIPLGHL--SLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCH

Query:  NRLPTKDNLLKR
          + T++   +R
Subjt:  NRLPTKDNLLKR

P93295 Uncharacterized mitochondrial protein AtMg003101.5e-1330.2Show/hide
Query:  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK--------------------------------VSSLVLKGRYFLGTSFVG
        A+P Y M+CFRL K L  ++   M  FWW + E  ++ S V  +     K                                + S +L+ RYF  +S + 
Subjt:  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK--------------------------------VSSLVLKGRYFLGTSFVG

Query:  ASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSL
         S+G RPSY WRS++ GR+LL RG    IG+G    ++   W+ +E  L
Subjt:  ASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSL

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein3.9e-1729Show/hide
Query:  LKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTS-------CVRDLFTGSG---HWDEVK
        +K RYF   S + A +  + SY W SLL G  LL +G +  IG+G  + I   N         V S P  PL +        + +LF   G    WD+ K
Subjt:  LKGRYFLGTSFVGASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTS-------CVRDLFTGSG---HWDEVK

Query:  VRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKR
        +      +D   I RI L      DK+IW++   G Y+V+ GY L       + P+ +      +  + +W + +  K+K F WR     L T + L  R
Subjt:  VRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYRLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKR

AT4G29090.1 Ribonuclease H-like superfamily protein4.8e-2326.22Show/hide
Query:  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDN-------------------PEGG---KEDSLVELE---------IPLSPKVSSLVLKGRYFLGTSFVGA
        A+P YTM CF L K +  +I  ++A+FWW N                    EGG   K+     L          +     + + V K RYF  +  + A
Subjt:  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDN-------------------PEGG---KEDSLVELE---------IPLSPKVSSLVLKGRYFLGTSFVGA

Query:  SLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWL---PNEFSLQVHSFPSLPLTSC-----VRDLFTGSG-HWDEVKVRSHFTMADSEAILR
         LG RPS+VW+S+   +++L +G +  +GNG  + I+   WL   P   +L++   P     S      V DL   SG  W +  +   F   + + I  
Subjt:  SLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWL---PNEFSLQVHSFPSLPLTSC-----VRDLFTGSG-HWDEVKVRSHFTMADSEAILR

Query:  IPLGHLSLEDKLIWHFEKNGLYSVKGGY-RLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKR
        +  G   + D   W +  +G Y+VK GY  L   ++ +  P        +  +  +WK     K++ F W+   N LP    L  R
Subjt:  IPLGHLSLEDKLIWHFEKNGLYSVKGGY-RLAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKR

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-1430.2Show/hide
Query:  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK--------------------------------VSSLVLKGRYFLGTSFVG
        A+P Y M+CFRL K L  ++   M  FWW + E  ++ S V  +     K                                + S +L+ RYF  +S + 
Subjt:  AIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPK--------------------------------VSSLVLKGRYFLGTSFVG

Query:  ASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSL
         S+G RPSY WRS++ GR+LL RG    IG+G    ++   W+ +E  L
Subjt:  ASLGHRPSYVWRSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATCGGGTCTGGAAGCAAGTCCAAGGGTGGAAGGGCAAATTTTTCTCAACGGGTGGCAAGGAAGTGTTGCTTAAATCTATCGTGCAAGCCATTCCATGCTACAC
AATGAACTGTTTCAGATTGCTGAAATGTTTGATTGGTGAAATCCATCGTCTCATGGCGAACTTTTGGTGGGATAATCCTGAAGGGGGGAAAGAAGATTCATTGGTTGAGC
TGGAAATCCCTTTGTCTCCCAAAGTGTCGAGCTTGGTGCTGAAGGGTCGGTACTTTCTAGGTACGAGTTTCGTTGGGGCCAGTTTGGGGCATCGACCGTCATATGTTTGG
AGAAGCTTATTATGGGGGCGTGATCTTCTGATGAGAGGGTGTCAGTGGCGTATAGGTAATGGCTCTTTGGTCCCTATTTACTTCTCGAATTGGCTCCCGAATGAGTTTTC
ATTGCAAGTTCACTCTTTCCCCTCCTTGCCTTTGACCAGTTGTGTTCGTGATTTGTTTACTGGTTCAGGACATTGGGATGAGGTGAAAGTCCGATCCCATTTTACCATGG
CAGACAGTGAAGCTATCTTGAGAATACCGCTTGGGCATCTTTCTCTGGAAGATAAGTTGATATGGCATTTTGAGAAGAATGGCCTTTACTCTGTTAAGGGTGGATACCGG
TTGGCTCATAGATTGAGTGTGCAAGATCAACCATCCTCGTCAGACTCGGCTTTATGGCATGAGTGGTGGTCTAGTCTCTGGAAGATGAATGTTCCAAGCAAAGTTAAATT
CTTCTTTTGGAGGTTATGTCACAACCGGCTACCCACAAAGGACAATCTTCTTAAAAGAGCAGGCGTCGATAAGGAATGGGTTGTCGCCGGCGTCGGGGGTGGTGCGGTAG
TGGCGTGGGTTCCTCCAGCCGAGAATGAACTGAAGTTGAATGTTGACGCAGCAGTTAGGCCCGAGACGAGAGAGGCTAGTGGTGGCTTTGTCTTGCGCAATGAGGGCTGG
GCAATGTTGAGGGGTATACAAGTTGCTCGTCAGATGGGTTTTTTCTGTTTTCATGTTGAGACCGATTCGTTGAGATTATCTAAAGTTCTGACTGATGATGTGGACGATAT
TTCGGAAGTAGGTGCAATTATGGATGTGATTCGAGGATTGCTTCGACAAGATTCTTCATGTAGGGTGTTGTTCACACCCAGGCAAGGCAACATGGTAGCACATACCATGG
CTTCTTTAGCTTTTGTTTATGCTAATTTTGTTTGGCTTGAGGATTGGCCCTCTGAGGCCTCAGATGTACTTTCTCGTGACTTTTCCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGATCGGGTCTGGAAGCAAGTCCAAGGGTGGAAGGGCAAATTTTTCTCAACGGGTGGCAAGGAAGTGTTGCTTAAATCTATCGTGCAAGCCATTCCATGCTACAC
AATGAACTGTTTCAGATTGCTGAAATGTTTGATTGGTGAAATCCATCGTCTCATGGCGAACTTTTGGTGGGATAATCCTGAAGGGGGGAAAGAAGATTCATTGGTTGAGC
TGGAAATCCCTTTGTCTCCCAAAGTGTCGAGCTTGGTGCTGAAGGGTCGGTACTTTCTAGGTACGAGTTTCGTTGGGGCCAGTTTGGGGCATCGACCGTCATATGTTTGG
AGAAGCTTATTATGGGGGCGTGATCTTCTGATGAGAGGGTGTCAGTGGCGTATAGGTAATGGCTCTTTGGTCCCTATTTACTTCTCGAATTGGCTCCCGAATGAGTTTTC
ATTGCAAGTTCACTCTTTCCCCTCCTTGCCTTTGACCAGTTGTGTTCGTGATTTGTTTACTGGTTCAGGACATTGGGATGAGGTGAAAGTCCGATCCCATTTTACCATGG
CAGACAGTGAAGCTATCTTGAGAATACCGCTTGGGCATCTTTCTCTGGAAGATAAGTTGATATGGCATTTTGAGAAGAATGGCCTTTACTCTGTTAAGGGTGGATACCGG
TTGGCTCATAGATTGAGTGTGCAAGATCAACCATCCTCGTCAGACTCGGCTTTATGGCATGAGTGGTGGTCTAGTCTCTGGAAGATGAATGTTCCAAGCAAAGTTAAATT
CTTCTTTTGGAGGTTATGTCACAACCGGCTACCCACAAAGGACAATCTTCTTAAAAGAGCAGGCGTCGATAAGGAATGGGTTGTCGCCGGCGTCGGGGGTGGTGCGGTAG
TGGCGTGGGTTCCTCCAGCCGAGAATGAACTGAAGTTGAATGTTGACGCAGCAGTTAGGCCCGAGACGAGAGAGGCTAGTGGTGGCTTTGTCTTGCGCAATGAGGGCTGG
GCAATGTTGAGGGGTATACAAGTTGCTCGTCAGATGGGTTTTTTCTGTTTTCATGTTGAGACCGATTCGTTGAGATTATCTAAAGTTCTGACTGATGATGTGGACGATAT
TTCGGAAGTAGGTGCAATTATGGATGTGATTCGAGGATTGCTTCGACAAGATTCTTCATGTAGGGTGTTGTTCACACCCAGGCAAGGCAACATGGTAGCACATACCATGG
CTTCTTTAGCTTTTGTTTATGCTAATTTTGTTTGGCTTGAGGATTGGCCCTCTGAGGCCTCAGATGTACTTTCTCGTGACTTTTCCTCCTAA
Protein sequenceShow/hide protein sequence
MRDRVWKQVQGWKGKFFSTGGKEVLLKSIVQAIPCYTMNCFRLLKCLIGEIHRLMANFWWDNPEGGKEDSLVELEIPLSPKVSSLVLKGRYFLGTSFVGASLGHRPSYVW
RSLLWGRDLLMRGCQWRIGNGSLVPIYFSNWLPNEFSLQVHSFPSLPLTSCVRDLFTGSGHWDEVKVRSHFTMADSEAILRIPLGHLSLEDKLIWHFEKNGLYSVKGGYR
LAHRLSVQDQPSSSDSALWHEWWSSLWKMNVPSKVKFFFWRLCHNRLPTKDNLLKRAGVDKEWVVAGVGGGAVVAWVPPAENELKLNVDAAVRPETREASGGFVLRNEGW
AMLRGIQVARQMGFFCFHVETDSLRLSKVLTDDVDDISEVGAIMDVIRGLLRQDSSCRVLFTPRQGNMVAHTMASLAFVYANFVWLEDWPSEASDVLSRDFSS