; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004891 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004891
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionclassical arabinogalactan protein 10-like
Genome locationchr6:8153024..8153410
RNA-Seq ExpressionLag0004891
SyntenyLag0004891
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018833931.2 classical arabinogalactan protein 10-like [Juglans regia]3.1e-0443.07Show/hide
Query:  MAFSTFVF-AILFASVAVSASAQPPGPA---------PAQSPPQRHPPTRTASPPSSRLGPTSPPQVSALPPIAKSHPPVLAPTAPPPAPVTSPATAIAN
        MA S FV+  +LFA VA SA AQ PG A         PA SP    PPT T++P  S   PT  P  SA  P + + PP  AP++ PPAP TSPA+A   
Subjt:  MAFSTFVF-AILFASVAVSASAQPPGPA---------PAQSPPQRHPPTRTASPPSSRLGPTSPPQVSALPPIAKSHPPVLAPTAPPPAPVTSPATAIAN

Query:  PPELNPPP----PPSAPSNGAASNDFRRCGYLVGVFL
         P ++ PP    P  +P NGAA N     G +  V L
Subjt:  PPELNPPP----PPSAPSNGAASNDFRRCGYLVGVFL
XP_021900554.1 classical arabinogalactan protein 10 [Carica papaya]9.0e-0437.41Show/hide
Query:  MAFSTFVFAILFASVAVSASAQPPGPAPAQSPPQRHP--------PTRTASPPSSRLGPTSPPQVS-ALPPIAKSHPPVLAPTAPPPAPVTSPATAIANP
        MA  TF+  +L A  + SA AQ PG AP QSPP   P        PT +   P     PT+PP V+  +PP +    P ++P APP +P ++P+T +   
Subjt:  MAFSTFVFAILFASVAVSASAQPPGPAPAQSPPQRHP--------PTRTASPPSSRLGPTSPPQVS-ALPPIAKSHPPVLAPTAPPPAPVTSPATAIANP

Query:  PELNPPP---PPSAPSNGAASNDFRRCGYLVG-VFLVVL
        P ++ PP   P   P NGAA N     G   G VF   L
Subjt:  PELNPPP---PPSAPSNGAASNDFRRCGYLVG-VFLVVL
TrEMBL top hitse value%identityAlignment
A0A2I4FQK5 classical arabinogalactan protein 10-like1.5e-0443.07Show/hide
Query:  MAFSTFVF-AILFASVAVSASAQPPGPA---------PAQSPPQRHPPTRTASPPSSRLGPTSPPQVSALPPIAKSHPPVLAPTAPPPAPVTSPATAIAN
        MA S FV+  +LFA VA SA AQ PG A         PA SP    PPT T++P  S   PT  P  SA  P + + PP  AP++ PPAP TSPA+A   
Subjt:  MAFSTFVF-AILFASVAVSASAQPPGPA---------PAQSPPQRHPPTRTASPPSSRLGPTSPPQVSALPPIAKSHPPVLAPTAPPPAPVTSPATAIAN

Query:  PPELNPPP----PPSAPSNGAASNDFRRCGYLVGVFL
         P ++ PP    P  +P NGAA N     G +  V L
Subjt:  PPELNPPP----PPSAPSNGAASNDFRRCGYLVGVFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68725.1 arabinogalactan protein 199.6e-0443.14Show/hide
Query:  VAVSASAQPPGPAPAQSPPQRHPPTRTASPP--SSRLGPTSPPQVSALPPIAKSHPPVLAPTAPPPAPVTSPATAIANPPELNPPPPPSAPSNGAASNDF
        VA   S   P P P QSPP   P   T SPP  S    PTSPP   A PP A + PP  AP +PPPAPV+ P     +P  L PP P  AP+     +  
Subjt:  VAVSASAQPPGPAPAQSPPQRHPPTRTASPP--SSRLGPTSPPQVSALPPIAKSHPPVLAPTAPPPAPVTSPATAIANPPELNPPPPPSAPSNGAASNDF

Query:  RR
        +R
Subjt:  RR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTTTCTACCTTCGTCTTCGCGATACTCTTCGCTTCAGTAGCTGTTTCCGCCTCTGCTCAGCCTCCGGGACCGGCGCCGGCACAATCACCGCCTCAGCGACATCC
ACCGACTAGGACCGCCAGTCCGCCATCGTCGAGGCTCGGCCCGACCTCGCCTCCACAGGTTTCCGCTCTCCCTCCGATCGCCAAGTCGCATCCGCCAGTACTCGCGCCGA
CCGCTCCTCCTCCAGCTCCTGTAACCTCTCCGGCGACTGCGATCGCCAACCCTCCGGAATTAAATCCACCACCACCACCGTCGGCTCCCAGTAACGGCGCCGCATCGAAC
GATTTTCGACGCTGTGGATATCTTGTAGGAGTTTTCTTAGTTGTGTTGTGGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTTTCTACCTTCGTCTTCGCGATACTCTTCGCTTCAGTAGCTGTTTCCGCCTCTGCTCAGCCTCCGGGACCGGCGCCGGCACAATCACCGCCTCAGCGACATCC
ACCGACTAGGACCGCCAGTCCGCCATCGTCGAGGCTCGGCCCGACCTCGCCTCCACAGGTTTCCGCTCTCCCTCCGATCGCCAAGTCGCATCCGCCAGTACTCGCGCCGA
CCGCTCCTCCTCCAGCTCCTGTAACCTCTCCGGCGACTGCGATCGCCAACCCTCCGGAATTAAATCCACCACCACCACCGTCGGCTCCCAGTAACGGCGCCGCATCGAAC
GATTTTCGACGCTGTGGATATCTTGTAGGAGTTTTCTTAGTTGTGTTGTGGCCGTGA
Protein sequenceShow/hide protein sequence
MAFSTFVFAILFASVAVSASAQPPGPAPAQSPPQRHPPTRTASPPSSRLGPTSPPQVSALPPIAKSHPPVLAPTAPPPAPVTSPATAIANPPELNPPPPPSAPSNGAASN
DFRRCGYLVGVFLVVLWP