CuGenDBv2

Gene ID	Lag0004947
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	dihydrofolate reductase-like
Genome location	chr6:8834363..8835834
RNA-Seq Expression	Lag0004947
Synteny	Lag0004947
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8652134.1 hypothetical protein Csa_022239 [Cucumis sativus]

1.6e-09

35.75

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------
        M S  +   KPRFLCLHGFRTS    + + G   L     S+     LHFL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------

Query:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                   Q   +S ++     K   L+K   +   +  SGAKFRS++VAEKAYST IG  CPSLHFLGEEDFL P
Subjt:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

XP_004152614.1 dihydrofolate reductase [Cucumis sativus]

1.6e-09

35.75

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------
        M S  +   KPRFLCLHGFRTS    + + G   L     S+     LHFL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------

Query:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                   Q   +S ++     K   L+K   +   +  SGAKFRS++VAEKAYST IG  CPSLHFLGEEDFL P
Subjt:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

XP_022997250.1 dihydrofolate reductase-like [Cucurbita maxima]

1.6e-09

36.31

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNLQN-----------
        M + G I RKPRFLCLHGFRTSG   + + G        +S+     L FL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNLQN-----------

Query:  -------TGISTSVSHS-------LKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                G S     S        K   L+K   +   +  SGAKFRSQ+VAEKAYS++IG  CPSLHFLG+EDFL P
Subjt:  -------TGISTSVSHS-------LKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

XP_023545459.1 dihydrofolate reductase-like [Cucurbita pepo subsp. pepo]

1.6e-09

36.31

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNLQN-----------
        M + G I RKPRFLCLHGFRTSG   + + G        +S+     L FL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNLQN-----------

Query:  -------TGISTSVSHS-------LKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                G S     S        K   L+K   +   +  SGAKFRSQ+VAEKAYS++IG  CPSLHFLG+EDFL P
Subjt:  -------TGISTSVSHS-------LKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

XP_038885360.1 dihydrofolate reductase-like [Benincasa hispida]

2.1e-09

35.2

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------
        M +  +I RKPRFLCLHGFRTS    + + G         S+     LHFL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------

Query:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                   Q   +S ++     K   L+K   +   +  SGAKFRS++VA+KAYST IG  CPSLHFLGEEDFL P
Subjt:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNX4 FSH1 domain-containing protein

7.8e-10

35.75

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------
        M S  +   KPRFLCLHGFRTS    + + G   L     S+     LHFL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------

Query:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                   Q   +S ++     K   L+K   +   +  SGAKFRS++VAEKAYST IG  CPSLHFLGEEDFL P
Subjt:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

A0A1S3BC97 dihydrofolate reductase-like

1.7e-09

35.75

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------
        M S  +I  KPRFLCLHGFRTS    + + G         S+     LHFL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------

Query:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                   Q   +S ++     K   L+K   +   +  SGAKFRS++VAEKAYST IG  CPSLHFLGEEDFL P
Subjt:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

A0A5A7VFL2 Dihydrofolate reductase-like

1.7e-09

35.75

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------
        M S  +I  KPRFLCLHGFRTS    + + G         S+     LHFL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNL-------------

Query:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                   Q   +S ++     K   L+K   +   +  SGAKFRS++VAEKAYST IG  CPSLHFLGEEDFL P
Subjt:  -----------QNTGISTSV-SHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

A0A6J1BPA7 dihydrofolate reductase-like

1.3e-09

34.64

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNLQN-----------
        M S  +I RKPRFLCLHGFRTSG+  + + G        +S+  +  LHFL    P   +           F     S+     +N              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNLQN-----------

Query:  -------TGISTSVSHSLKITCLSKDRLMDSSVSH-------SGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                G S     S  +  L +  +  + V         SGAKFRS ++AEKAYS SIG  CPSLHFLG+EDFL P
Subjt:  -------TGISTSVSHSLKITCLSKDRLMDSSVSH-------SGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

A0A6J1K928 dihydrofolate reductase-like

7.8e-10

36.31

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Query:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNLQN-----------
        M + G I RKPRFLCLHGFRTSG   + + G        +S+     L FL    P   +           F     S  F   RN              
Subjt:  MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKE-----------FSILPISSGFNSVRNLQN-----------

Query:  -------TGISTSVSHS-------LKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
                G S     S        K   L+K   +   +  SGAKFRSQ+VAEKAYS++IG  CPSLHFLG+EDFL P
Subjt:  -------TGISTSVSHS-------LKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G24380.1 INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process

4.0e-06

31.72

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Query:  MESHGR-ILRKPRFLCLHGFRTSGKSSR------SKSGNGRL-------------LSSINSI-------------------SISSTLHFLSKENPTLKEF
        M S GR I RKPRFLCLHGFRTSG+  +       KS   RL              S +  I                   +    L +L      L  F
Subjt:  MESHGR-ILRKPRFLCLHGFRTSGKSSR------SKSGNGRL-------------LSSINSI-------------------SISSTLHFLSKENPTLKEF

Query:  -SILPISSG---FNSVRNLQNTGISTSVSHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP
          ++  S G      +  LQ  GI+      +K   +             GAK +S  +AE AYS+S+     SLHFLGE DFLKP
Subjt:  -SILPISSG---FNSVRNLQNTGISTSVSHSLKITCLSKDRLMDSSVSHSGAKFRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKP

AT4G24380.2 CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645)

8.3e-04

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Query:  MESHGR-ILRKPRFLCLHGFRTSGK
        M S GR I RKPRFLCLHGFRTSG+
Subjt:  MESHGR-ILRKPRFLCLHGFRTSGK

Sequences

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CDS sequence

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ATGGAAAGCCACGGAAGAATTCTCAGAAAACCTAGATTCCTTTGCCTCCATGGCTTCCGAACCAGTGGGAAATCCTCAAGAAGCAAGTCCGGAAATGGTCGGCTTCTGTC
CTCGATCAATTCGATCTCGATTTCCTCGACGCTCCATTTCCTGTCGAAGGAAAATCCGACGTTGAAGGAATTTTCGATCCTCCCTATTTCGAGTGGTTTCAATTCAGTGC
GGAATTTACAGAATACAGGAATTTCGACGAGTGTCTCCCATTCATTGAAGATTACATGCTTGAGCAAGGACCGTTTGATGGATTCCTCGGTTTCTCACAGCGGTGCGAAA
TTCAGATCGCAAACTGTGGCTGAGAAAGCTTACTCGACGTCCATTGGATGCCCATGCCCGTCCCTCCATTTTCTAGGAGAGGAAGACTTCTTGAAGCCTATGGATTGA

mRNA sequence

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Protein sequence

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MESHGRILRKPRFLCLHGFRTSGKSSRSKSGNGRLLSSINSISISSTLHFLSKENPTLKEFSILPISSGFNSVRNLQNTGISTSVSHSLKITCLSKDRLMDSSVSHSGAK
FRSQTVAEKAYSTSIGCPCPSLHFLGEEDFLKPMD

Lag0004947 (gene) of Sponge gourd (AG-4) v1 genome