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Lag0004952 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004952
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr6:8879600..8883368
RNA-Seq ExpressionLag0004952
SyntenyLag0004952
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020268.1 hypothetical protein SDJN02_16951, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-3573.77Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRP-PPPPPPPRRRPL
        YCSNLYPKADCY ICNWCL+QKEESKAKSPNSSNSSS    RDD+SSIK  R       +KDQIRTF   + RPIKKQ SPE  +RP PPPPPPPRR+P+
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRP-PPPPPPPRRRPL

Query:  AGDDNLRRTRSEEISHRTGIQR
        A +DNLRRTRSEEISHR+GIQR
Subjt:  AGDDNLRRTRSEEISHRTGIQR

XP_022132041.1 uncharacterized protein LOC111005007 [Momordica charantia]5.4e-4179.69Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKA-----RDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRPPPPPPPP-
        YCSNLYPKA+CYRICNWCLSQKEESKAKSPNSSNSS+SNKA     RDDYSSIKK R      S+KDQIRTF SQENRPIKKQ SPE+   PPPPPPPP 
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKA-----RDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRPPPPPPPP-

Query:  -RRRPLAGDDNLRRTRSEEISHRTGIQR
         RRRP+A DD LRRTRSEEISHRTGIQR
Subjt:  -RRRPLAGDDNLRRTRSEEISHRTGIQR

XP_022951049.1 uncharacterized protein LOC111454013 [Cucurbita moschata]1.2e-3574.59Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRP-PPPPPPPRRRPL
        YCSNLYPKADCYRICNWCL+QKEESKAKSPNSSNSSS    RDD+SSIK  R       +KDQIRTF   + RPIKKQ SPE  +RP PPPPPPPRR+P+
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRP-PPPPPPPRRRPL

Query:  AGDDNLRRTRSEEISHRTGIQR
        A +DNLRRTRSEEISHR+GIQR
Subjt:  AGDDNLRRTRSEEISHRTGIQR

XP_023002810.1 uncharacterized protein LOC111496564 [Cucurbita maxima]8.9e-3673.98Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDR--PPPPPPPPRRRP
        YCSNLYPKADCYRICNWCL+QKEESKAKSPNSSNSSS +  RDDYSSIK  R       +KDQIRTF   + RPIKKQ SPE  +R  PPPPPPPPRR+P
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDR--PPPPPPPPRRRP

Query:  LAGDDNLRRTRSEEISHRTGIQR
        +A ++NLRRTRSEEISHR+GIQR
Subjt:  LAGDDNLRRTRSEEISHRTGIQR

XP_023537720.1 uncharacterized protein LOC111798664 [Cucurbita pepo subsp. pepo]4.4e-3573.17Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDR--PPPPPPPPRRRP
        YCSNLYPKADCYRICNWCL+QKEESKAKSPNSSNSSS    RDD+SSIK  R       +KDQIRTF   + RPIKKQ SPE  +R  PPPPPPPPRR+P
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDR--PPPPPPPPRRRP

Query:  LAGDDNLRRTRSEEISHRTGIQR
        +A ++NLRRTRSEEISHR+GIQR
Subjt:  LAGDDNLRRTRSEEISHRTGIQR

TrEMBL top hitse value%identityAlignment
A0A0A0LLR8 Uncharacterized protein3.8e-2458.2Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPD-RPPPPPPPPRRRPL
        YCSNLYPKADCYRICNWCL+  +ES  KSPNSS+S                     I ++ DQ   F SQ N+PIKKQSS  L    PPPPPPPPRRR +
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPD-RPPPPPPPPRRRPL

Query:  AGDDNLRRTRSEEISHRTGIQR
        + D+ LRRTRSEEISHRTGI+R
Subjt:  AGDDNLRRTRSEEISHRTGIQR

A0A1S3BCA2 uncharacterized protein LOC1034881035.8e-2558.54Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELP--DRPPPPPPPPRRRP
        YCSNLYPKADCYRICNWCL+Q +ES  KSPNSS+S                     I ++ DQ   F S+ N+PIKKQSS  L     PPPPPPPPRRR 
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELP--DRPPPPPPPPRRRP

Query:  LAGDDNLRRTRSEEISHRTGIQR
        ++ DD LRRTRSEEISHRTGI+R
Subjt:  LAGDDNLRRTRSEEISHRTGIQR

A0A6J1BR47 uncharacterized protein LOC1110050072.6e-4179.69Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKA-----RDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRPPPPPPPP-
        YCSNLYPKA+CYRICNWCLSQKEESKAKSPNSSNSS+SNKA     RDDYSSIKK R      S+KDQIRTF SQENRPIKKQ SPE+   PPPPPPPP 
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKA-----RDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRPPPPPPPP-

Query:  -RRRPLAGDDNLRRTRSEEISHRTGIQR
         RRRP+A DD LRRTRSEEISHRTGIQR
Subjt:  -RRRPLAGDDNLRRTRSEEISHRTGIQR

A0A6J1GHL7 uncharacterized protein LOC1114540135.6e-3674.59Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRP-PPPPPPPRRRPL
        YCSNLYPKADCYRICNWCL+QKEESKAKSPNSSNSSS    RDD+SSIK  R       +KDQIRTF   + RPIKKQ SPE  +RP PPPPPPPRR+P+
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDRP-PPPPPPPRRRPL

Query:  AGDDNLRRTRSEEISHRTGIQR
        A +DNLRRTRSEEISHR+GIQR
Subjt:  AGDDNLRRTRSEEISHRTGIQR

A0A6J1KQ08 uncharacterized protein LOC1114965644.3e-3673.98Show/hide
Query:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDR--PPPPPPPPRRRP
        YCSNLYPKADCYRICNWCL+QKEESKAKSPNSSNSSS +  RDDYSSIK  R       +KDQIRTF   + RPIKKQ SPE  +R  PPPPPPPPRR+P
Subjt:  YCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRTINNIASHKDQIRTFHSQENRPIKKQSSPELPDR--PPPPPPPPRRRP

Query:  LAGDDNLRRTRSEEISHRTGIQR
        +A ++NLRRTRSEEISHR+GIQR
Subjt:  LAGDDNLRRTRSEEISHRTGIQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGCCCACCTCGAAATCGGAAGTCGAGTGCTGCATGTGTGGAGATTTTGGCTTCTCTTACGAGCTTTTTCACTGCAAAATCTGCCAATTCAGATCCCAACACAGG
CAACCATTTTTCTTCTCTCAAACTTGCAATTCCTTTTCGATTCTTTCTGGGTTTTGTTTCGTACTGTAGCAATTTGTACCCAAAAGCTGATTGTTACCGAATATGCAATT
GGTGTCTAAGTCAAAAGGAGGAATCAAAAGCCAAATCGCCAAATTCTTCCAATTCTTCTTCCTCGAATAAAGCACGAGACGATTATTCCTCAATCAAAAAGATCAGAACC
ATCAATAATATCGCCTCTCACAAGGATCAAATTCGCACTTTTCATTCCCAAGAAAACAGACCCATCAAAAAACAGAGCTCGCCGGAACTTCCTGACCGTCCCCCGCCGCC
TCCGCCTCCGCCTCGCCGGAGACCCCTCGCCGGAGACGACAATCTCCGCCGGACTAGATCGGAGGAGATTTCGCACCGAACTGGGATCCAACGGCAGGAATTTTGGAACC
TTCTGGATTGGGTGAACGCCATTGAGATTCCTTCAAGATTATCAGAAAGTCTATTCCTCGGATCTTTCTCCCTTGTTCGTCCTTCCCTCATCTTCTCCTACGAACTGTTG
TCCCTCCACCTCCGATCAACGAACCAAGACGGGTTTTCGAGATGGGAGATGGCTTCGAGAATCAAAATGGCGAAGATCAAAGATGGGTTTCAAGACGGCGATAATCGACG
ATTGGAGGTCGTTTCTCCTTCCTTTCTTGCGTTTCCGACGATCAGTAGCTGTGGCGGCAAGATCCTTCAACTATTCGGTCGTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGCCCACCTCGAAATCGGAAGTCGAGTGCTGCATGTGTGGAGATTTTGGCTTCTCTTACGAGCTTTTTCACTGCAAAATCTGCCAATTCAGATCCCAACACAGG
CAACCATTTTTCTTCTCTCAAACTTGCAATTCCTTTTCGATTCTTTCTGGGTTTTGTTTCGTACTGTAGCAATTTGTACCCAAAAGCTGATTGTTACCGAATATGCAATT
GGTGTCTAAGTCAAAAGGAGGAATCAAAAGCCAAATCGCCAAATTCTTCCAATTCTTCTTCCTCGAATAAAGCACGAGACGATTATTCCTCAATCAAAAAGATCAGAACC
ATCAATAATATCGCCTCTCACAAGGATCAAATTCGCACTTTTCATTCCCAAGAAAACAGACCCATCAAAAAACAGAGCTCGCCGGAACTTCCTGACCGTCCCCCGCCGCC
TCCGCCTCCGCCTCGCCGGAGACCCCTCGCCGGAGACGACAATCTCCGCCGGACTAGATCGGAGGAGATTTCGCACCGAACTGGGATCCAACGGCAGGAATTTTGGAACC
TTCTGGATTGGGTGAACGCCATTGAGATTCCTTCAAGATTATCAGAAAGTCTATTCCTCGGATCTTTCTCCCTTGTTCGTCCTTCCCTCATCTTCTCCTACGAACTGTTG
TCCCTCCACCTCCGATCAACGAACCAAGACGGGTTTTCGAGATGGGAGATGGCTTCGAGAATCAAAATGGCGAAGATCAAAGATGGGTTTCAAGACGGCGATAATCGACG
ATTGGAGGTCGTTTCTCCTTCCTTTCTTGCGTTTCCGACGATCAGTAGCTGTGGCGGCAAGATCCTTCAACTATTCGGTCGTGGGTGA
Protein sequenceShow/hide protein sequence
MERPPRNRKSSAACVEILASLTSFFTAKSANSDPNTGNHFSSLKLAIPFRFFLGFVSYCSNLYPKADCYRICNWCLSQKEESKAKSPNSSNSSSSNKARDDYSSIKKIRT
INNIASHKDQIRTFHSQENRPIKKQSSPELPDRPPPPPPPPRRRPLAGDDNLRRTRSEEISHRTGIQRQEFWNLLDWVNAIEIPSRLSESLFLGSFSLVRPSLIFSYELL
SLHLRSTNQDGFSRWEMASRIKMAKIKDGFQDGDNRRLEVVSPSFLAFPTISSCGGKILQLFGRG