; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0004961 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004961
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChloroquine-resistance transporter-like
Genome locationchr6:9019485..9020113
RNA-Seq ExpressionLag0004961
SyntenyLag0004961
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR013936 - Chloroquine-resistance transporter-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020259.1 Protein CLT2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]6.8e-3387.91Show/hide
Query:  HGTSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        HG  C GAPLLPLLYVITNLSFNITLLSLVKKSSAV++SLVVMLSVP+SIYILSLPLPYLP+GA+LSPLFLTGSLMLVLGLA YY PQR+K
Subjt:  HGTSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

XP_022132091.1 protein CLT2, chloroplastic-like [Momordica charantia]2.6e-3293.1Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        C+GAPLLPLLYVITNL+FNITLLSLVKK SAVVASL+VMLSVPISIYILSLPLPYLPEGASLSPLFLTGSL+LVLGL FYYIPQRSK
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

XP_023001859.1 protein CLT2, chloroplastic [Cucurbita maxima]7.5e-3290.8Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        C GAPLLPLLYVITNLSFNITLLSLVKKSSAV++SLVVMLSVP+SIYILSLPLPYLP+GA+LSPLFLTGSLMLVLGLA YYIPQR+K
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

XP_023537000.1 protein CLT2, chloroplastic-like [Cucurbita pepo subsp. pepo]3.7e-3189.66Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        C GAPLLPLLYVITNLSFNITLLSLVKKSSAV++SLVVMLSVP+SIYILSLPLPYLP+GA+LSPLFLTGSLMLVLGLA YY PQR+K
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

XP_038885312.1 protein CLT2, chloroplastic [Benincasa hispida]2.6e-3294.19Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRS
        CEGAPLLPLLYVITNLSFNIT+LS+VKKSSAVVASLVVMLSVP+SIYILSLPLPYLP+GASLSPLFLTGSLMLVLGLAFYYIPQ S
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRS

TrEMBL top hitse value%identityAlignment
A0A1S3BBG1 protein CLT2, chloroplastic isoform X11.2e-3089.66Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        CEGAPLLPLLYVITNLSFNIT+L++VKK SAVVASLVVMLSVP+SIYILSLPLP+LPEGASLSPLFLTGS MLVLGLAFYYIP  SK
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

A0A5A7VCU5 Protein CLT24.0e-3185.87Show/hide
Query:  FHGTSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        F    CEGAPLLPLLYVITNLSFNIT+L++VKK SAVVASLVVMLSVP+SIYILSLPLP+LPEGASLSPLFLTGS MLVLGLAFYYIP  SK
Subjt:  FHGTSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

A0A6J1BR98 protein CLT2, chloroplastic-like1.2e-3293.1Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        C+GAPLLPLLYVITNL+FNITLLSLVKK SAVVASL+VMLSVPISIYILSLPLPYLPEGASLSPLFLTGSL+LVLGL FYYIPQRSK
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

A0A6J1GHA2 protein CLT2, chloroplastic2.4e-3188.51Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        C GAPLLPLLYV+TNLSFNITLLSLVKKSSAV++SLVVMLSVP+SIYILSLPLPYLP+GA+LSPLFLTGSLMLVLGLA YY PQR+K
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

A0A6J1KNU1 protein CLT2, chloroplastic3.6e-3290.8Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK
        C GAPLLPLLYVITNLSFNITLLSLVKKSSAV++SLVVMLSVP+SIYILSLPLPYLP+GA+LSPLFLTGSLMLVLGLA YYIPQR+K
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK

SwissProt top hitse value%identityAlignment
A1L4X0 Protein CLT2, chloroplastic3.6e-2163.53Show/hide
Query:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIP
        + C+GAP+LPLLY+ TNL+FNI+LL LVK SSA+V+SL +MLSVP+++YI+S PLPYLP G+SLS  F  G ++LVLGL  Y IP
Subjt:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIP

Q058P6 Protein CLT1, chloroplastic8.6e-1551.22Show/hide
Query:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY
        T CEGAPLLP+++V+ N+++NI+LL L+K SSAVV+SL   +SVPI++Y  +LPLPYL   ++L   F+ G+++LV+G+  Y
Subjt:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY

Q8RWL5 Protein CLT3, chloroplastic1.2e-1351.25Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY
        C+GAP LPLL+VI N+ +NI LL L+K SSAVV+ L   +SVPI++++ ++PLPYL   +SL   F+ G+++LVLG+  Y
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY

Arabidopsis top hitse value%identityAlignment
AT4G24460.1 CRT (chloroquine-resistance transporter)-like transporter 22.6e-2263.53Show/hide
Query:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIP
        + C+GAP+LPLLY+ TNL+FNI+LL LVK SSA+V+SL +MLSVP+++YI+S PLPYLP G+SLS  F  G ++LVLGL  Y IP
Subjt:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIP

AT4G24460.2 CRT (chloroquine-resistance transporter)-like transporter 22.6e-2263.53Show/hide
Query:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIP
        + C+GAP+LPLLY+ TNL+FNI+LL LVK SSA+V+SL +MLSVP+++YI+S PLPYLP G+SLS  F  G ++LVLGL  Y IP
Subjt:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIP

AT5G12170.2 CRT (chloroquine-resistance transporter)-like transporter 38.9e-1551.25Show/hide
Query:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY
        C+GAP LPLL+VI N+ +NI LL L+K SSAVV+ L   +SVPI++++ ++PLPYL   +SL   F+ G+++LVLG+  Y
Subjt:  CEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY

AT5G19380.1 CRT (chloroquine-resistance transporter)-like transporter 16.1e-1651.22Show/hide
Query:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY
        T CEGAPLLP+++V+ N+++NI+LL L+K SSAVV+SL   +SVPI++Y  +LPLPYL   ++L   F+ G+++LV+G+  Y
Subjt:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY

AT5G19380.2 CRT (chloroquine-resistance transporter)-like transporter 16.1e-1651.22Show/hide
Query:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY
        T CEGAPLLP+++V+ N+++NI+LL L+K SSAVV+SL   +SVPI++Y  +LPLPYL   ++L   F+ G+++LV+G+  Y
Subjt:  TSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGCAGAAGATTGTGTTATCTTGAGATAAGCATATCCAAATCTGAGAATGGTCCATTAATTATCAGCCCTGGTCTCTTCTCTCTTCCATTCCACGGGACGAGTTG
TGAAGGGGCTCCATTGCTTCCACTGCTTTACGTGATTACAAATTTGTCCTTCAACATAACTTTGCTCAGCTTGGTGAAGAAATCTTCGGCAGTCGTTGCTTCTCTTGTTG
TGATGCTTTCAGTGCCAATTTCAATTTATATTCTATCACTTCCATTGCCATATCTACCTGAAGGCGCAAGCTTAAGCCCCCTCTTTCTCACGGGGAGTTTAATGCTTGTG
TTGGGTCTTGCTTTTTACTACATTCCTCAGCGTTCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATGCAGAAGATTGTGTTATCTTGAGATAAGCATATCCAAATCTGAGAATGGTCCATTAATTATCAGCCCTGGTCTCTTCTCTCTTCCATTCCACGGGACGAGTTG
TGAAGGGGCTCCATTGCTTCCACTGCTTTACGTGATTACAAATTTGTCCTTCAACATAACTTTGCTCAGCTTGGTGAAGAAATCTTCGGCAGTCGTTGCTTCTCTTGTTG
TGATGCTTTCAGTGCCAATTTCAATTTATATTCTATCACTTCCATTGCCATATCTACCTGAAGGCGCAAGCTTAAGCCCCCTCTTTCTCACGGGGAGTTTAATGCTTGTG
TTGGGTCTTGCTTTTTACTACATTCCTCAGCGTTCAAAGTAA
Protein sequenceShow/hide protein sequence
MRCRRLCYLEISISKSENGPLIISPGLFSLPFHGTSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLV
LGLAFYYIPQRSK