CuGenDBv2

Gene ID	Lag0004967
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	TPR_REGION domain-containing protein
Genome location	chr6:9106517..9112137
RNA-Seq Expression	Lag0004967
Synteny	Lag0004967
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152601.1 uncharacterized protein LOC101214199 [Cucumis sativus]

1.0e-95

95.73

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+YYWLGKCYE KKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_008444918.1 PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo]

7.1e-97

96.21

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+YYWLGKCYEMKKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_022951869.1 uncharacterized protein LOC111454602 [Cucurbita moschata]

1.9e-94

94.31

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLS+NANAY WLGKCYEMKKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_023537835.1 uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]

6.6e-95

94.79

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLS+NANAY WLGKCYEMKKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_038884950.1 uncharacterized protein LOC120075535 [Benincasa hispida]

1.4e-97

96.68

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MVTDILLQI LILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+YYWLGKCYE+KKLRGEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPL8 TPR_REGION domain-containing protein

4.9e-96

95.73

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+YYWLGKCYE KKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A1S3BC86 uncharacterized protein LOC103488119

3.4e-97

96.21

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+YYWLGKCYEMKKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A5A7VBU3 TPR domain protein

3.4e-97

96.21

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+YYWLGKCYEMKKLR EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1GK03 uncharacterized protein LOC111454602

9.3e-95

94.31

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDAL+KRAELKMSTNRR +VDSALADLTESVTLS+NANAY WLGKCYEMKKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1KRQ5 uncharacterized protein LOC111496615

1.2e-94

93.84

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDAL+KRAELKMSTNRRA+VDSA+ADLTESVTLS+NANAY WLGKCYEMKKLRGEAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLS+S
Subjt:  AREALERLSSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

9.7e-36

44.78

Show/hide

Query:  TDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQG
        T+ ++Q A++++ +VMF A+  + QR   K R + RA ++++R  ++ ++LLARAR+ P +S + SLA+  + EAD  IA+ P DAA HI++ALALD+ G
Subjt:  TDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQG

Query:  FKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSR---NANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLS
          TSAL+S D AL+    KSLS  ER DAL KRAE+K++ NRR  +DSA+ DL E+V L+     A  +  LG+CYE K L+ +A+ A+ EAL  +P   
Subjt:  FKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSR---NANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLS

Query:  N
        N
Subjt:  N

Sequences

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CDS sequence

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ATGGTTGAGGAGCGTGGGTTTCACGCGCGAAATATAGTGTCGCGCCGTCGCGCCGCCGGTCCAAAAAAGCGAAATAAGGCTGGGAGATGGACCCTAGAGACGAAACCGAC
AAGTGAGACGGGCCAAGACCGGAGGCCCGACCCCCTGCTCGGCCTCGGCCAGCTTGCGCGGGTAGAGCCCGTTCGACTCCGTTTGGTCCATACCGTCTCTGGCCGCCCCG
GTTCCGCCTGTGTGGCTAGCACCACACCGGTGTGCAAGTTTTCCGTTTTCCAGGCCACGTCTTCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAAGTCAGCTGT
AGAAGCGACGGCAAAATTAAAACCCAAAACGCCGCCCTCGGTAGACCAGATTCCGATCTCCCCCAATCCCTAACTCCGTTCAGATCCGATTCCGCTCGTATTCGGAGTTC
TTCCACTCCCCGGAATCGATCGAAAGCAGAGTTAAAGAAATTGCAGGCAGTTCAGGGATCGAGAAAGATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAA
TGGTCGTCATGTTCCTCGCTATGCACAACATTCCACAGAGATTCTTTGCCAAGCTCCGATTGCGCTTTCGAGCCGATGTTGAATCCAAACGCCACTTCGTGAGAGGCGCT
CAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCATCGGCGACGTCGTTGGCGGAAGAAGTCGTAGCAGAAGCTGATAAGGCCATCGCTCTCGATCCTAAGGATGC
CGCTGCTCATATCCTCAAGGCTTTGGCTCTCGACATTCAAGGATTCAAGACCTCTGCTCTTGAATCGCTCGATACGGCTCTGTCGCCGCTCGTCGCTAAGTCGCTCAGCG
ACGAGGAGCGAGGCGACGCGTTGTTCAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAGCCCTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCTGTGACGCTG
AGTCGGAATGCGAATGCCTATTATTGGTTGGGGAAATGCTATGAGATGAAGAAACTGAGAGGAGAGGCGAAGAAAGCATACGAAGAAGCGTTGAACATCGAGCCACGATT
ATCCAACGCTCGGGAGGCATTGGAACGCCTATCATCATCGTAA

mRNA sequence

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Protein sequence

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MVEERGFHARNIVSRRRAAGPKKRNKAGRWTLETKPTSETGQDRRPDPLLGLGQLARVEPVRLRLVHTVSGRPGSACVASTTPVCKFSVFQATSSPHLQIYRWWHVKVSC
RSDGKIKTQNAALGRPDSDLPQSLTPFRSDSARIRSSSTPRNRSKAELKKLQAVQGSRKMVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGA
QLLARARSAPSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVAKSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTL
SRNANAYYWLGKCYEMKKLRGEAKKAYEEALNIEPRLSNAREALERLSSS

Lag0004967 (gene) of Sponge gourd (AG-4) v1 genome