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Lag0004975 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0004975
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMads box protein, putative
Genome locationchr6:9209807..9210975
RNA-Seq ExpressionLag0004975
SyntenyLag0004975
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065090.1 MADS-box protein SVP isoform X1 [Cucumis melo var. makuwa]1.1e-4088.79Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS
        MRGEDLQGLNLEDLK+LER LEVGL RVL TKE KIMSEI+ALELKGARLMEENKMLKQQM+RLSNER M VLVD+SDV VV EEGVSSESAANV SCNS
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS

Query:  GPPADDDSSDTSLKLG
        GPPADDDSSDTSLKLG
Subjt:  GPPADDDSSDTSLKLG

XP_008444930.1 PREDICTED: MADS-box protein SVP isoform X1 [Cucumis melo]1.1e-4088.79Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS
        MRGEDLQGLNLEDLK+LER LEVGL RVL TKE KIMSEI+ALELKGARLMEENKMLKQQM+RLSNER M VLVD+SDV VV EEGVSSESAANV SCNS
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS

Query:  GPPADDDSSDTSLKLG
        GPPADDDSSDTSLKLG
Subjt:  GPPADDDSSDTSLKLG

XP_022131965.1 MADS-box protein JOINTLESS [Momordica charantia]3.8e-4186.96Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEE-GVSSESAANVCSCNSG
        MRGEDLQGLNLEDLK+LERVLEVGLARVL TKE KIMSEI+ALELKGARLMEEN+ LKQ+M+RLSNER+PVL D SDV +PEE GVSSESAANVCSCNSG
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEE-GVSSESAANVCSCNSG

Query:  PPADDDSSDTSLKLG
        PPAD+DSSDTSLKLG
Subjt:  PPADDDSSDTSLKLG

XP_038886182.1 MADS-box protein JOINTLESS-like isoform X1 [Benincasa hispida]1.0e-4185.96Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGP
        MRGEDLQGLNLEDLK+LER+LEV L RVL TKE KIMSEINALE KGARLMEENKMLKQQM+RLSN+R PVLVD+   V  EEGVSSESAANVCSCNSGP
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGP

Query:  PADDDSSDTSLKLG
        PADDDSSDTSLKLG
Subjt:  PADDDSSDTSLKLG

XP_038886185.1 MADS-box protein JOINTLESS-like isoform X2 [Benincasa hispida]1.0e-4185.96Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGP
        MRGEDLQGLNLEDLK+LER+LEV L RVL TKE KIMSEINALE KGARLMEENKMLKQQM+RLSN+R PVLVD+   V  EEGVSSESAANVCSCNSGP
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGP

Query:  PADDDSSDTSLKLG
        PADDDSSDTSLKLG
Subjt:  PADDDSSDTSLKLG

TrEMBL top hitse value%identityAlignment
A0A0A0LRV6 K-box domain-containing protein3.8e-3985.34Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS
        MRGEDLQGLNLEDLK+LER LEVGL RVL TKE KIM EI+ LELKGARLMEENKMLKQQM+RLSNER M VLVD+SDV V  EEG+SSESAANV SCNS
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS

Query:  GPPADDDSSDTSLKLG
        GPPADDDSSDTSLKLG
Subjt:  GPPADDDSSDTSLKLG

A0A1S3BB15 MADS-box protein SVP isoform X15.4e-4188.79Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS
        MRGEDLQGLNLEDLK+LER LEVGL RVL TKE KIMSEI+ALELKGARLMEENKMLKQQM+RLSNER M VLVD+SDV VV EEGVSSESAANV SCNS
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS

Query:  GPPADDDSSDTSLKLG
        GPPADDDSSDTSLKLG
Subjt:  GPPADDDSSDTSLKLG

A0A5A7VD04 MADS-box protein SVP isoform X15.4e-4188.79Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS
        MRGEDLQGLNLEDLK+LER LEVGL RVL TKE KIMSEI+ALELKGARLMEENKMLKQQM+RLSNER M VLVD+SDV VV EEGVSSESAANV SCNS
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNER-MPVLVDNSDV-VVPEEGVSSESAANVCSCNS

Query:  GPPADDDSSDTSLKLG
        GPPADDDSSDTSLKLG
Subjt:  GPPADDDSSDTSLKLG

A0A6J1BR53 MADS-box protein JOINTLESS1.8e-4186.96Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEE-GVSSESAANVCSCNSG
        MRGEDLQGLNLEDLK+LERVLEVGLARVL TKE KIMSEI+ALELKGARLMEEN+ LKQ+M+RLSNER+PVL D SDV +PEE GVSSESAANVCSCNSG
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEE-GVSSESAANVCSCNSG

Query:  PPADDDSSDTSLKLG
        PPAD+DSSDTSLKLG
Subjt:  PPADDDSSDTSLKLG

A0A6J1KMD5 MADS-box protein JOINTLESS-like2.9e-3983.33Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGP
        MRGEDLQGLNLEDLK+LE VLE+GLARVLQTKE KIM+EINALELKGARLMEEN+ L +QMIRLSN+R P+LV  SDV VPE+GVSS+SAAN+ SCNSGP
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGP

Query:  PADDDSSDTSLKLG
        PADDDSSDTSLKLG
Subjt:  PADDDSSDTSLKLG

SwissProt top hitse value%identityAlignment
O82794 MADS-box protein AGL248.3e-1546.09Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSES-AANVCSCNSG
        +RGEDL GLNLE+L+RLE++LE GL+RV + K   +MS+I +LE +G+ L++ENK L+ ++  L   ++  L         +E + +ES   NV S +SG
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSES-AANVCSCNSG

Query:  PPADDDSSDTSLKLG
         P +DD SDTSLKLG
Subjt:  PPADDDSSDTSLKLG

Q5K4R0 MADS-box transcription factor 471.8e-1449.57Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSD-VVVPEEGVSSESAANVCSCNSG
        MRGE+L  LN+E L+ LE+ LE GL  VL+TK  KI+ EI+ LE K  +L+EEN  LK+Q+      RM  +    D  +V EEG SSES  N  S    
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSD-VVVPEEGVSSESAANVCSCNSG

Query:  PPADDDSSDTSLKLGSS
        PP +D SSDTSL+LG S
Subjt:  PPADDDSSDTSLKLGSS

Q69TG5 MADS-box transcription factor 554.1e-1446.09Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGP
        MRGE+L+GL++E+L+++E+ LE GL RVL TK+ + M EI+ L+ KG +L EEN  L+ QM ++    +   V +++ V+ E+G SSES   + + NSG 
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGP

Query:  PAD-DDSSDTSLKLG
          D DD SD SLKLG
Subjt:  PAD-DDSSDTSLKLG

Q9FUY6 MADS-box protein JOINTLESS7.7e-2149.62Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSD------VVV-----------PEE
        MRGE+LQGLN+E+L++LER LE GL+RV++ K +KIM EIN L+ KG  LMEEN+ L+QQ++ +SN       +N++      VV+            E+
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSD------VVV-----------PEE

Query:  GVSSESAANVCSCNSGPPADDDSSDTSLKLG
        G SSES  N C+    PP DDDSSDTSLKLG
Subjt:  GVSSESAANVCSCNSGPPADDDSSDTSLKLG

Q9FVC1 MADS-box protein SVP1.5e-1948.46Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLS--NERMPVLVDNS----------DVVVPEEGVSSE
        MRGE+LQGL++E+L++LE+ LE GL RV++TK +KIMSEI+ L+ KG +LM+ENK L+QQ  +L+  NER+ + + N+          +  V EEG SSE
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLS--NERMPVLVDNS----------DVVVPEEGVSSE

Query:  SAANVCSCNSGPPADDDSSDTSLKLGSSNG
        S  N  + ++G P D +SSDTSL+LG   G
Subjt:  SAANVCSCNSGPPADDDSSDTSLKLGSSNG

Arabidopsis top hitse value%identityAlignment
AT1G26310.1 K-box region and MADS-box transcription factor family protein8.8e-0436.92Show/hide
Query:  GEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSE-INALELKGARLMEENKMLKQQMIRLSN
        GE+L+ ++L+DL+ LE+ LE  L  + ++++N++M+E +N L+ K   + EEN ML +Q+    N
Subjt:  GEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSE-INALELKGARLMEENKMLKQQMIRLSN

AT2G22540.1 K-box region and MADS-box transcription factor family protein1.0e-2048.46Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLS--NERMPVLVDNS----------DVVVPEEGVSSE
        MRGE+LQGL++E+L++LE+ LE GL RV++TK +KIMSEI+ L+ KG +LM+ENK L+QQ  +L+  NER+ + + N+          +  V EEG SSE
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLS--NERMPVLVDNS----------DVVVPEEGVSSE

Query:  SAANVCSCNSGPPADDDSSDTSLKLGSSNG
        S  N  + ++G P D +SSDTSL+LG   G
Subjt:  SAANVCSCNSGPPADDDSSDTSLKLGSSNG

AT2G22540.2 K-box region and MADS-box transcription factor family protein1.0e-2048.46Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLS--NERMPVLVDNS----------DVVVPEEGVSSE
        MRGE+LQGL++E+L++LE+ LE GL RV++TK +KIMSEI+ L+ KG +LM+ENK L+QQ  +L+  NER+ + + N+          +  V EEG SSE
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLS--NERMPVLVDNS----------DVVVPEEGVSSE

Query:  SAANVCSCNSGPPADDDSSDTSLKLGSSNG
        S  N  + ++G P D +SSDTSL+LG   G
Subjt:  SAANVCSCNSGPPADDDSSDTSLKLGSSNG

AT4G24540.1 AGAMOUS-like 245.9e-1646.09Show/hide
Query:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSES-AANVCSCNSG
        +RGEDL GLNLE+L+RLE++LE GL+RV + K   +MS+I +LE +G+ L++ENK L+ ++  L   ++  L         +E + +ES   NV S +SG
Subjt:  MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSES-AANVCSCNSG

Query:  PPADDDSSDTSLKLG
         P +DD SDTSLKLG
Subjt:  PPADDDSSDTSLKLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGAGAGGATCTTCAAGGATTGAACTTAGAAGATTTGAAGCGATTGGAAAGAGTGCTTGAAGTAGGCCTCGCACGAGTTCTTCAAACCAAGGAAAATAAGATTAT
GAGTGAAATTAATGCTCTCGAGCTTAAGGGAGCCAGGCTGATGGAAGAGAACAAGATGCTTAAGCAGCAGATGATAAGGTTGTCGAATGAAAGAATGCCGGTGCTTGTAG
ATAATTCCGACGTGGTGGTGCCGGAAGAAGGGGTTTCGTCGGAGTCCGCCGCCAACGTCTGCAGCTGCAACAGCGGCCCTCCCGCCGACGACGACAGCTCCGACACCTCC
CTCAAATTAGGCTCCTCAAACGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGAGAGGATCTTCAAGGATTGAACTTAGAAGATTTGAAGCGATTGGAAAGAGTGCTTGAAGTAGGCCTCGCACGAGTTCTTCAAACCAAGGAAAATAAGATTAT
GAGTGAAATTAATGCTCTCGAGCTTAAGGGAGCCAGGCTGATGGAAGAGAACAAGATGCTTAAGCAGCAGATGATAAGGTTGTCGAATGAAAGAATGCCGGTGCTTGTAG
ATAATTCCGACGTGGTGGTGCCGGAAGAAGGGGTTTCGTCGGAGTCCGCCGCCAACGTCTGCAGCTGCAACAGCGGCCCTCCCGCCGACGACGACAGCTCCGACACCTCC
CTCAAATTAGGCTCCTCAAACGGTTAA
Protein sequenceShow/hide protein sequence
MRGEDLQGLNLEDLKRLERVLEVGLARVLQTKENKIMSEINALELKGARLMEENKMLKQQMIRLSNERMPVLVDNSDVVVPEEGVSSESAANVCSCNSGPPADDDSSDTS
LKLGSSNG