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Lag0005012 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005012
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionOrf109b
Genome locationchr6:9549635..9550909
RNA-Seq ExpressionLag0005012
SyntenyLag0005012
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGY62789.1 orf109 [Eruca vesicaria subsp. sativa]1.9e-0759.02Show/hide
Query:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMV---FYIYTGATHHM
        MIDLGMYTFDSLWR+G RMS AL+LEFC AS   ++  I     S++   FYIY GAT H+
Subjt:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMV---FYIYTGATHHM
KAG2269805.1 hypothetical protein Bca52824_064360 [Brassica carinata]8.7e-0572.22Show/hide
Query:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYY
        MIDLGMYTFDSLWR+G RMS AL+LEFC AS   ++
Subjt:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYY
XP_030925283.1 uncharacterized protein LOC115952312 [Quercus lobata]1.2e-0673.47Show/hide
Query:  MASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESN-----HLN
        M SN AAFVSSS YQGKSVVFTGDHTPLSIS+IGT  L S      HLN
Subjt:  MASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESN-----HLN
YP_009045803.1 orf125 [Batis maritima]5.8e-1765.59Show/hide
Query:  MSPALQLEFCFASNN---WYYAFIFQASFSMVF-YIYTG-ATHHMASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESN-----HLN
        MS  LQLEFC ASNN    YYAFIFQASFSM F +++ G   ++M  NPAAFVSSS YQ KSVVFTGDHTPLSIS+IGT  L S      HLN
Subjt:  MSPALQLEFCFASNN---WYYAFIFQASFSMVF-YIYTG-ATHHMASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESN-----HLN
YP_009320212.1 orf109b [Sinapis arvensis]1.9e-0759.02Show/hide
Query:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMV---FYIYTGATHHM
        MIDLGMYTFDSLWR+G RMS AL+LEFC AS   ++  I     S++   FYIY GAT H+
Subjt:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMV---FYIYTGATHHM
TrEMBL top hitse value%identityAlignment
A0A068BEB9 Orf1252.8e-1765.59Show/hide
Query:  MSPALQLEFCFASNN---WYYAFIFQASFSMVF-YIYTG-ATHHMASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESN-----HLN
        MS  LQLEFC ASNN    YYAFIFQASFSM F +++ G   ++M  NPAAFVSSS YQ KSVVFTGDHTPLSIS+IGT  L S      HLN
Subjt:  MSPALQLEFCFASNN---WYYAFIFQASFSMVF-YIYTG-ATHHMASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESN-----HLN
A0A088BEV1 Orf1099.1e-0859.02Show/hide
Query:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMV---FYIYTGATHHM
        MIDLGMYTFDSLWR+G RMS AL+LEFC AS   ++  I     S++   FYIY GAT H+
Subjt:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMV---FYIYTGATHHM
A0A1D6WKJ1 Orf109b9.1e-0859.02Show/hide
Query:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMV---FYIYTGATHHM
        MIDLGMYTFDSLWR+G RMS AL+LEFC AS   ++  I     S++   FYIY GAT H+
Subjt:  MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMV---FYIYTGATHHM
A0A2N9GHR6 Uncharacterized protein4.1e-0875.51Show/hide
Query:  MASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESN-----HLN
        M SNPAAFVSSS YQGKSVVFTGDHTPLSIS+IGT  L S      HLN
Subjt:  MASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESN-----HLN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGACTTGGGTATGTATACTTTTGATTCTCTCTGGAGACATGGCTATCGTATGTCCCCAGCGTTACAACTCGAGTTTTGCTTCGCATCAAACAACTGGTATTATGC
ATTCATCTTCCAAGCGTCATTCTCAATGGTTTTTTACATTTACACTGGGGCTACCCATCATATGGCGAGCAATCCGGCAGCATTTGTCTCATCCTCGCAGTACCAAGGCA
AAAGTGTCGTCTTCACTGGTGACCACACCCCACTCTCTATTTCAAACATTGGTACGGAGATATTAGAATCTAACCACTTGAACTATAACAGACCTTTTGGATTACCTCAA
ATGTATATGTATTCTGCTACAACAGTTGAATGCACAAGGAACAAGCCAACACAGAGGTATGAGAGACCAGGTTTCACCAGTGTCAATACACAAATCATCAAAAGAAAAGT
TCCCATAGAGGGATTAATGATGTTTACCTACGGATTCGGGATTGCGATGCGACGGGACCGAGGTGAGGAGTTTTCCCCTTATTTTGAACTGTGGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGACTTGGGTATGTATACTTTTGATTCTCTCTGGAGACATGGCTATCGTATGTCCCCAGCGTTACAACTCGAGTTTTGCTTCGCATCAAACAACTGGTATTATGC
ATTCATCTTCCAAGCGTCATTCTCAATGGTTTTTTACATTTACACTGGGGCTACCCATCATATGGCGAGCAATCCGGCAGCATTTGTCTCATCCTCGCAGTACCAAGGCA
AAAGTGTCGTCTTCACTGGTGACCACACCCCACTCTCTATTTCAAACATTGGTACGGAGATATTAGAATCTAACCACTTGAACTATAACAGACCTTTTGGATTACCTCAA
ATGTATATGTATTCTGCTACAACAGTTGAATGCACAAGGAACAAGCCAACACAGAGGTATGAGAGACCAGGTTTCACCAGTGTCAATACACAAATCATCAAAAGAAAAGT
TCCCATAGAGGGATTAATGATGTTTACCTACGGATTCGGGATTGCGATGCGACGGGACCGAGGTGAGGAGTTTTCCCCTTATTTTGAACTGTGGAAGTAA
Protein sequenceShow/hide protein sequence
MIDLGMYTFDSLWRHGYRMSPALQLEFCFASNNWYYAFIFQASFSMVFYIYTGATHHMASNPAAFVSSSQYQGKSVVFTGDHTPLSISNIGTEILESNHLNYNRPFGLPQ
MYMYSATTVECTRNKPTQRYERPGFTSVNTQIIKRKVPIEGLMMFTYGFGIAMRRDRGEEFSPYFELWK