CuGenDBv2

Gene ID	Lag0005060
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Translation initiation factor IF-2
Genome location	chr6:10137515..10140987
RNA-Seq Expression	Lag0005060
Synteny	Lag0005060
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KGN62818.1 hypothetical protein Csa_022087 [Cucumis sativus]

6.6e-81

86.12

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSDPK T++K+KP   DGGSRLKLESSD+KKK I+SS KNSIPSSKHKSVS++TK+EVKSKTISSSSKTTTKTT+T T  AKVREKKVFNLPGQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF
        EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAK+AYEKKL+RQKEQRTGTP K  S KP SRPESSQ+PQ PSKNGD+KAKKKI+NDSDDDDDF
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF

Query:  ILSPKRRKM
        ILSPKRRKM
Subjt:  ILSPKRRKM

XP_004150287.1 uncharacterized protein LOC101205851 isoform X2 [Cucumis sativus]

6.6e-81

86.12

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSDPK T++K+KP   DGGSRLKLESSD+KKK I+SS KNSIPSSKHKSVS++TK+EVKSKTISSSSKTTTKTT+T T  AKVREKKVFNLPGQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF
        EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAK+AYEKKL+RQKEQRTGTP K  S KP SRPESSQ+PQ PSKNGD+KAKKKI+NDSDDDDDF
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF

Query:  ILSPKRRKM
        ILSPKRRKM
Subjt:  ILSPKRRKM

XP_008445018.1 PREDICTED: uncharacterized protein LOC103488185 isoform X1 [Cucumis melo]

1.3e-81

86.6

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSDPK T++K+KP   DGGSRLKLESSD+KKK I+SS KNSIPSSKHKSVS++TKSEVKSKTISSSSKTTTKTT+T T  AKVREKK+FNLPGQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF
        EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAK+AYEKKL+RQKEQRTGTP K  S KP SRPESSQ+PQ PSKNGD+KAKKKIMNDSDDDDDF
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF

Query:  ILSPKRRKM
        ILSPKRRKM
Subjt:  ILSPKRRKM

XP_031736856.1 uncharacterized protein LOC101205851 isoform X1 [Cucumis sativus]

1.8e-78

82.19

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSDPK T++K+KP   DGGSRLKLESSD+KKK I+SS KNSIPSSKHKSVS++TK+EVKSKTISSSSKTTTKTT+T T  AKVREKKVFNLPGQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEF----------WMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKI
        EEREPLRIFYESLSKQIPASEMAEF          WMMEHGMLSPEKAK+AYEKKL+RQKEQRTGTP K  S KP SRPESSQ+PQ PSKNGD+KAKKKI
Subjt:  EEREPLRIFYESLSKQIPASEMAEF----------WMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKI

Query:  MNDSDDDDDFILSPKRRKM
        +NDSDDDDDFILSPKRRKM
Subjt:  MNDSDDDDDFILSPKRRKM

XP_038885128.1 uncharacterized protein LOC120075630 isoform X1 [Benincasa hispida]

2.4e-83

88.41

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSD KPT++K+KP   DGGSRLKLESSD+KKK I+SS KNSI SSKHKS+S++TKSEVKSKTISSSSKTTTKTT+T TT AKVREKKVFNLPGQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDFIL
        EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAK+AY+KKL+RQKEQRTGTP KS KPPSRPESSQKPQQPSKNGD+KAKKKIMNDSDDDDDFIL
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDFIL

Query:  SPKRRKM
        SPKRRKM
Subjt:  SPKRRKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLY4 Uncharacterized protein

3.2e-81

86.12

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSDPK T++K+KP   DGGSRLKLESSD+KKK I+SS KNSIPSSKHKSVS++TK+EVKSKTISSSSKTTTKTT+T T  AKVREKKVFNLPGQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF
        EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAK+AYEKKL+RQKEQRTGTP K  S KP SRPESSQ+PQ PSKNGD+KAKKKI+NDSDDDDDF
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF

Query:  ILSPKRRKM
        ILSPKRRKM
Subjt:  ILSPKRRKM

A0A1S3BCG5 uncharacterized protein LOC103488185 isoform X1

6.4e-82

86.6

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSDPK T++K+KP   DGGSRLKLESSD+KKK I+SS KNSIPSSKHKSVS++TKSEVKSKTISSSSKTTTKTT+T T  AKVREKK+FNLPGQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF
        EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAK+AYEKKL+RQKEQRTGTP K  S KP SRPESSQ+PQ PSKNGD+KAKKKIMNDSDDDDDF
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNK--SPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDF

Query:  ILSPKRRKM
        ILSPKRRKM
Subjt:  ILSPKRRKM

A0A6J1BR23 uncharacterized protein LOC111004987 isoform X1

1.3e-77

84.06

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MV++ KPTV+K+KPGNQDGGSRLKLESSDNK+K IESSTK+SI  SK KS SVL KSEVKSK  SSSSKTT+KTT+T TT  KVREKKV+NL GQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDFIL
        EEREPLRIFYESLSKQIP SEMAEFWMMEHGMLSPEKAKRAYEKKL+RQKEQRTGTP KSPK PS+PESSQK Q  SKNGDLKAKKKI NDS +DDDFIL
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDFIL

Query:  SPKRRKM
        SPKRRKM
Subjt:  SPKRRKM

A0A6J1GJC9 uncharacterized protein LOC111454380 isoform X1

4.8e-77

84.13

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSDPKPTV+KVK G+QDGGSRLKLESSDNKK        +S+ SSKHKSVSVL KSEVKSKTI+SSSKTTTK T   T+ AKVREKKVFNL GQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDD-DFI
        EEREPLRIFYESLSKQI  SEMAEFWMMEHGMLSPEKAK+AYEKKL+RQKEQRTGTP KS KPPSRPESSQ+PQQPSKNGDLKAKKKI N+SDDDD DFI
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDD-DFI

Query:  LSPKRRKM
        LSPKRRKM
Subjt:  LSPKRRKM

A0A6J1KPA8 uncharacterized protein LOC111496374

3.4e-75

83.17

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Query:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP
        MVSD KPTV+KVK G+QDGGSRLKLESSDNKK        +S+ SSKHKSVSVL KSEVKSKTI+SSSKTTTK TS   + AKVREKKVFNL GQKYDPP
Subjt:  MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPP

Query:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDD-DFI
        EEREPLRIFYESLSKQI  S MAEFWMMEHGMLSPEKAK+AYEKKL+RQKEQRTGTP KS KPPSRPESSQ+PQQP KNGDLKAKKKI NDSDDDD DFI
Subjt:  EEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDD-DFI

Query:  LSPKRRKM
        LSPKRRKM
Subjt:  LSPKRRKM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G19990.1 unknown protein

1.9e-17

38.84

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Query:  AKVKP--GNQDGGSRLKLESS---DNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKV---REKKVFNLPGQKYDPPE
        AK KP  GN  G  +LK E +   D+  K I+SS   S      K   +    E K  +  +SS   +K         +V   RE+KV++LPGQK + P+
Subjt:  AKVKP--GNQDGGSRLKLESS---DNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKV---REKKVFNLPGQKYDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKS-------------------PKPPSRPESSQKPQQPSKNGDL
        ER+PLRIFYESL KQIP S+MA+ W+ME G+L  EKAK+  EKKL  QK  +  +P KS                    K PS   S++K    SK    
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKS-------------------PKPPSRPESSQKPQQPSKNGDL

Query:  KAKKKIMNDSDDDDDFILSPKRRK
        K +KK  +D D DDDF+ S   +K
Subjt:  KAKKKIMNDSDDDDDFILSPKRRK

AT5G11600.1 unknown protein

2.5e-38

51.24

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Query:  MVSDPKPTVAKVKPGNQDG--GSRLKLESS-DNKKKIIESSTKNSIPSSKHKSVSVLT-KSEVKS-------KTISSSS------KTTTKTTSTI-----
        M +  +P+ AK +P +      SR+K++ S  +KKKI  SS      S    SVS +T KSE K        KTI+++S      K   +TTST+     
Subjt:  MVSDPKPTVAKVKPGNQDG--GSRLKLESS-DNKKKIIESSTKNSIPSSKHKSVSVLT-KSEVKS-------KTISSSS------KTTTKTTSTI-----

Query:  --TTAAKV--------REKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKS-PKPPSRP
          TT+A V        REKKV++L GQK+DPPEEREPLRIFYESLSKQIP SEMAEFW+MEHGMLSPEKAKRA+EKK ++ K+ R GTP+KS P   S+ 
Subjt:  --TTAAKV--------REKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKS-PKPPSRP

Query:  ESSQKPQQPSKNG-DLKAKKKIM-NDSDDDDDFILSPKRRKM
        ESSQ+      NG D + KKK++ +D DDDDDFILS KRRK+
Subjt:  ESSQKPQQPSKNG-DLKAKKKIM-NDSDDDDDFILSPKRRKM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTTTCAGACCCCAAACCCACTGTTGCGAAGGTCAAACCAGGTAATCAAGATGGCGGCTCCAGGTTAAAGCTCGAGTCCTCTGACAATAAGAAGAAGATCATTGAAAG
CTCCACCAAGAACTCAATTCCCTCTTCCAAACACAAATCCGTCTCTGTTCTCACCAAATCCGAGGTGAAGTCCAAGACAATCTCGAGTTCTTCAAAGACGACAACAAAAA
CTACCAGTACTATTACTACTGCTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGCCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTAC
GAGTCCTTGTCGAAACAGATACCAGCAAGCGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAGGGCATATGAGAAGAAACTGAA
AAGACAAAAGGAACAGAGGACCGGGACTCCGAATAAATCACCAAAACCGCCGAGCAGACCAGAGAGTTCACAGAAACCACAGCAGCCATCAAAGAATGGTGATCTAAAAG
CCAAGAAAAAGATCATGAACGATAGCGACGACGACGATGACTTCATTTTAAGCCCCAAGAGAAGGAAAATGTAG

mRNA sequence

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Protein sequence

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MVSDPKPTVAKVKPGNQDGGSRLKLESSDNKKKIIESSTKNSIPSSKHKSVSVLTKSEVKSKTISSSSKTTTKTTSTITTAAKVREKKVFNLPGQKYDPPEEREPLRIFY
ESLSKQIPASEMAEFWMMEHGMLSPEKAKRAYEKKLKRQKEQRTGTPNKSPKPPSRPESSQKPQQPSKNGDLKAKKKIMNDSDDDDDFILSPKRRKM

Lag0005060 (gene) of Sponge gourd (AG-4) v1 genome