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Lag0005071 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005071
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionstem-specific protein TSJT1-like
Genome locationchr6:10202439..10205132
RNA-Seq ExpressionLag0005071
SyntenyLag0005071
Gene Ontology termsNA
InterPro domainsIPR024286 - Domain of unknown function DUF3700
IPR044828 - Stem-specific protein TSJT1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022959386.1 stem-specific protein TSJT1-like isoform X1 [Cucurbita moschata]3.1e-1568.06Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISK------PRDRFSLNSEIR
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ ISK       R+R   N + R
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISK------PRDRFSLNSEIR
XP_022959387.1 stem-specific protein TSJT1-like isoform X2 [Cucurbita moschata]1.3e-1384Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
XP_023006443.1 stem-specific protein TSJT1-like isoform X1 [Cucurbita maxima]1.3e-1384Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
XP_023006444.1 stem-specific protein TSJT1-like isoform X2 [Cucurbita maxima]1.2e-1466.67Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISK------PRDRFSLNSEIR
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ  SK       R+R   N + R
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISK------PRDRFSLNSEIR
XP_023548563.1 stem-specific protein TSJT1-like [Cucurbita pepo subsp. pepo]1.3e-1384Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
TrEMBL top hitse value%identityAlignment
A0A6J1CAR8 stem-specific protein TSJT1-like6.3e-1484Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
A0A6J1H4E0 stem-specific protein TSJT1-like isoform X26.3e-1484Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
A0A6J1H4Q4 stem-specific protein TSJT1-like isoform X11.5e-1568.06Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISK------PRDRFSLNSEIR
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ ISK       R+R   N + R
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISK------PRDRFSLNSEIR
A0A6J1L268 stem-specific protein TSJT1-like isoform X25.7e-1566.67Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISK------PRDRFSLNSEIR
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ  SK       R+R   N + R
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISK------PRDRFSLNSEIR
A0A6J1L4X9 stem-specific protein TSJT1-like isoform X16.3e-1484Show/hide
Query:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
        N  S   V   QFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
Subjt:  NQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22850.1 Aluminium induced protein with YGL and LRDR motifs1.1e-0551.35Show/hide
Query:  GKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
        G VPLYWG  A+G++  +DD   +K  CGKS A FP+
Subjt:  GKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
AT5G19140.1 Aluminium induced protein with YGL and LRDR motifs3.3e-1586.05Show/hide
Query:  VTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
        V   Q GKVPLYWGITADGYVAFADD  LLKGACGKSLASFPQ
Subjt:  VTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQ
AT5G19140.2 Aluminium induced protein with YGL and LRDR motifs1.0e-0850.94Show/hide
Query:  VTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISKPRDRFS
        V   Q GKVPLYWGITADGYVAFADD  LLKG    +     +    P+++ +
Subjt:  VTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISKPRDRFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCGCTCTTCAATCTCACTCTCTACCCCTCAAAACCAATATGAACATGTGCTTCCTTCTCAAAATCAATTGTCAATAAGTGGAGTGACCCTGGGTCAGTTCGG
GAAAGTGCCTCTGTATTGGGGAATCACCGCGGATGGATACGTCGCGTTCGCCGATGATGCTGGACTCCTCAAAGGCGCTTGTGGAAAATCACTCGCTTCGTTTCCTCAAG
ATATTTCGAAACCTAGGGATCGGTTTTCGTTGAATTCGGAAATTAGGGCACGAATTGATGCTGGATTGTTTGTTTGTTTCGATTTCAGGCTGTTTCTTCTCCACCGCCAC
CGCCGCCGATTTCCTCTTACCCAGATGCTACAGACCAACTGGATTCCCGCTGTCGCTGCCTTCCTTTCCTTCATCTTCTCTTCTTTCCCTCTCCTTCGTCATCTCTTCTC
TCTCTCAACCCTCAAAACTCTGTTTTCTTCTTGTTCAGCTTCGACGGGTGCTTTGTTTCTTGAAGATGAAAATGGAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCGCTCTTCAATCTCACTCTCTACCCCTCAAAACCAATATGAACATGTGCTTCCTTCTCAAAATCAATTGTCAATAAGTGGAGTGACCCTGGGTCAGTTCGG
GAAAGTGCCTCTGTATTGGGGAATCACCGCGGATGGATACGTCGCGTTCGCCGATGATGCTGGACTCCTCAAAGGCGCTTGTGGAAAATCACTCGCTTCGTTTCCTCAAG
ATATTTCGAAACCTAGGGATCGGTTTTCGTTGAATTCGGAAATTAGGGCACGAATTGATGCTGGATTGTTTGTTTGTTTCGATTTCAGGCTGTTTCTTCTCCACCGCCAC
CGCCGCCGATTTCCTCTTACCCAGATGCTACAGACCAACTGGATTCCCGCTGTCGCTGCCTTCCTTTCCTTCATCTTCTCTTCTTTCCCTCTCCTTCGTCATCTCTTCTC
TCTCTCAACCCTCAAAACTCTGTTTTCTTCTTGTTCAGCTTCGACGGGTGCTTTGTTTCTTGAAGATGAAAATGGAACTTAG
Protein sequenceShow/hide protein sequence
MASRSSISLSTPQNQYEHVLPSQNQLSISGVTLGQFGKVPLYWGITADGYVAFADDAGLLKGACGKSLASFPQDISKPRDRFSLNSEIRARIDAGLFVCFDFRLFLLHRH
RRRFPLTQMLQTNWIPAVAAFLSFIFSSFPLLRHLFSLSTLKTLFSSCSASTGALFLEDENGT