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Lag0005089 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005089
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr6:10507653..10508284
RNA-Seq ExpressionLag0005089
SyntenyLag0005089
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]6.5e-2749.07Show/hide
Query:  RTPTRD-QNHLWGPAGGGSSRKRKAIAREARAEPE---------YRV--------------------RGE-LLKPSLTPLVGFGGERVTPEGSIKLPVTF
        ++P R+ +  + GP    S RKRKA  REAR   E         +RV                     GE +LK S  PLVGFGGERV PEG I+ PVTF
Subjt:  RTPTRD-QNHLWGPAGGGSSRKRKAIAREARAEPE---------YRV--------------------RGE-LLKPSLTPLVGFGGERVTPEGSIKLPVTF

Query:  GDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK
        G G  +VTKM++ LVV+  S+YNAILGRPT+H ++AI STYHQ +KFPTP GVG +KGEQ+
Subjt:  GDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]9.4e-2661.54Show/hide
Query:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK
        E+LK SLTPL+GFGGER+ P+G I+LP+TF     ++T+M++FLVVD  S+YN IL RPT+H ++AI STYHQ +KFPTP GVG +KGEQ+
Subjt:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]5.5e-2665.93Show/hide
Query:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK
        E LK SLTPL+GFGGERV P G I+LPVTF  G  ++TKM++FLVVD  S+YNAIL R T++ +KAI STYHQ +KFPTP GVG +KGEQ+
Subjt:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]9.4e-2667.03Show/hide
Query:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK
        ++LK S  PLVGFGGERV  EG I+LPVTFG G  +VTKM++FLVV+  S+YNAILGRPT+H +KAI STYHQ  KFPT  GVG +KGEQ+
Subjt:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK

XP_022158432.1 uncharacterized protein LOC111024924 [Momordica charantia]2.5e-2665.56Show/hide
Query:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQ
        ++LK S  PL+GFGGERV PEG I+LPVTFG G  ++TKM++FLVV+  S+YNAILGRPT+H ++AI STYHQ +KFPTP GV  +KGEQ
Subjt:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQ

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141473.1e-2749.07Show/hide
Query:  RTPTRD-QNHLWGPAGGGSSRKRKAIAREARAEPE---------YRV--------------------RGE-LLKPSLTPLVGFGGERVTPEGSIKLPVTF
        ++P R+ +  + GP    S RKRKA  REAR   E         +RV                     GE +LK S  PLVGFGGERV PEG I+ PVTF
Subjt:  RTPTRD-QNHLWGPAGGGSSRKRKAIAREARAEPE---------YRV--------------------RGE-LLKPSLTPLVGFGGERVTPEGSIKLPVTF

Query:  GDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK
        G G  +VTKM++ LVV+  S+YNAILGRPT+H ++AI STYHQ +KFPTP GVG +KGEQ+
Subjt:  GDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK

A0A6J1CZ14 uncharacterized protein LOC1110159014.5e-2661.54Show/hide
Query:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK
        E+LK SLTPL+GFGGER+ P+G I+LP+TF     ++T+M++FLVVD  S+YN IL RPT+H ++AI STYHQ +KFPTP GVG +KGEQ+
Subjt:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK

A0A6J1DKR9 uncharacterized protein LOC1110214382.7e-2665.93Show/hide
Query:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK
        E LK SLTPL+GFGGERV P G I+LPVTF  G  ++TKM++FLVVD  S+YNAIL R T++ +KAI STYHQ +KFPTP GVG +KGEQ+
Subjt:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK

A0A6J1DQY2 uncharacterized protein LOC1110223214.5e-2667.03Show/hide
Query:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK
        ++LK S  PLVGFGGERV  EG I+LPVTFG G  +VTKM++FLVV+  S+YNAILGRPT+H +KAI STYHQ  KFPT  GVG +KGEQ+
Subjt:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK

A0A6J1DX76 uncharacterized protein LOC1110249241.2e-2665.56Show/hide
Query:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQ
        ++LK S  PL+GFGGERV PEG I+LPVTFG G  ++TKM++FLVV+  S+YNAILGRPT+H ++AI STYHQ +KFPTP GV  +KGEQ
Subjt:  ELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILGRPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGGCCGAGCCTGACCAAAGATGGCAGAGACAAAGGAGAACCCCTACGAGAGATCAGAACCATCTTTGGGGACCAGCTGGAGGGGGTTCGAGCAGGAAGAGGAA
AGCTATTGCCAGGGAAGCGAGAGCTGAACCAGAATATCGAGTTAGAGGGGAACTCTTAAAGCCAAGTCTTACCCCACTTGTAGGTTTTGGAGGAGAAAGAGTGACCCCCG
AGGGTAGCATAAAACTTCCCGTGACCTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGA
AGACCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTCGTCAAGGGAGAGCAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGGCCGAGCCTGACCAAAGATGGCAGAGACAAAGGAGAACCCCTACGAGAGATCAGAACCATCTTTGGGGACCAGCTGGAGGGGGTTCGAGCAGGAAGAGGAA
AGCTATTGCCAGGGAAGCGAGAGCTGAACCAGAATATCGAGTTAGAGGGGAACTCTTAAAGCCAAGTCTTACCCCACTTGTAGGTTTTGGAGGAGAAAGAGTGACCCCCG
AGGGTAGCATAAAACTTCCCGTGACCTTTGGGGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATCCTAGGA
AGACCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCCGAATGGTGTGGGAGTCGTCAAGGGAGAGCAGAAGTAG
Protein sequenceShow/hide protein sequence
MAKAEPDQRWQRQRRTPTRDQNHLWGPAGGGSSRKRKAIAREARAEPEYRVRGELLKPSLTPLVGFGGERVTPEGSIKLPVTFGDGQNAVTKMINFLVVDCMSAYNAILG
RPTLHEMKAIASTYHQLLKFPTPNGVGVVKGEQK