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Lag0005119 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005119
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr6:10932602..10932997
RNA-Seq ExpressionLag0005119
SyntenyLag0005119
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]2.5e-1745.74Show/hide
Query:  TSNASSSAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQ
        T+ A  S    PT  F++P LNQ+LNQ+T++KLDRGN+LLWK LA+PIL+SYKL +    +S   PK       L TQ   ++ ++  +    +  +   
Subjt:  TSNASSSAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQ

Query:  QAVTTNPLYESWVAIDQLLLGWLYNSMTP
          VT NP YE W+  D LLLGWLYNSMTP
Subjt:  QAVTTNPLYESWVAIDQLLLGWLYNSMTP

XP_016900937.1 PREDICTED: uncharacterized protein LOC107991116 [Cucumis melo]2.5e-1744.7Show/hide
Query:  ANATSNASSSAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRA
        ++ T+ A  S    PT  F++P LNQ+LNQ+T++KLDRGN+LLWK LA+PIL+SYKL +    +S   PK       L TQ   ++ ++  +    +  +
Subjt:  ANATSNASSSAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRA

Query:  LRQQAVTTNPLYESWVAIDQLLLGWLYNSMTP
             VT NP YE W+  D LLLGWLYNSMTP
Subjt:  LRQQAVTTNPLYESWVAIDQLLLGWLYNSMTP

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]6.6e-1847.06Show/hide
Query:  SAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQQAVTTNPL
        + +    F+SPPLNQLLNQITS+K+DRGNFLLW+NLA+PILRSYKL            K C     + T     ++ S             Q + T NP 
Subjt:  SAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQQAVTTNPL

Query:  YESWVAIDQLLLGWLYNSM
        YE+W+ +D+LLLGWLYNSM
Subjt:  YESWVAIDQLLLGWLYNSM

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]3.8e-1846.34Show/hide
Query:  SAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQQAVTTN
        S IG+ T  FS+PPLNQ+LNQ+ SVKLDRGN+LLW+ LA+PIL+SYKLQ    E++   PK     T   +      K                   T N
Subjt:  SAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQQAVTTN

Query:  PLYESWVAIDQLLLGWLYNSMTP
        P ++ WV  D LLLGW+YNSMTP
Subjt:  PLYESWVAIDQLLLGWLYNSMTP

XP_038887015.1 uncharacterized protein LOC120077182 [Benincasa hispida]1.1e-1750Show/hide
Query:  MANATSNASSSAIGNPT-FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRA
        MANA   A+ S+IG  T FS+PPLNQLLNQIT+ KL+RG F+LWK LA+PILR YK     LE+     K CS    + T   +       ++      A
Subjt:  MANATSNASSSAIGNPT-FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRA

Query:  LRQQAVTTNPLYESWVAIDQLLLGWLYNSMTP
          ++  T NPLYE WV  DQLLLGW YNSMTP
Subjt:  LRQQAVTTNPLYESWVAIDQLLLGWLYNSMTP

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911161.2e-1744.7Show/hide
Query:  ANATSNASSSAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRA
        ++ T+ A  S    PT  F++P LNQ+LNQ+T++KLDRGN+LLWK LA+PIL+SYKL +    +S   PK       L TQ   ++ ++  +    +  +
Subjt:  ANATSNASSSAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRA

Query:  LRQQAVTTNPLYESWVAIDQLLLGWLYNSMTP
             VT NP YE W+  D LLLGWLYNSMTP
Subjt:  LRQQAVTTNPLYESWVAIDQLLLGWLYNSMTP

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.7e-1742.75Show/hide
Query:  MANATSNASSSAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRAL
        MANA   A+  ++ +  FS+PPLNQ+LNQ+T+VKLDR N+LLWK LA+PIL+ YKL+     ++     C S      +     + +    +      ++
Subjt:  MANATSNASSSAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRAL

Query:  RQQAVTTNPLYESWVAIDQLLLGWLYNSMTP
          + V  NPL+E WV  D LLLGWLYNSMTP
Subjt:  RQQAVTTNPLYESWVAIDQLLLGWLYNSMTP

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X42.7e-1742.75Show/hide
Query:  MANATSNASSSAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRAL
        MANA   A+  ++ +  FS+PPLNQ+LNQ+T+VKLDR N+LLWK LA+PIL+ YKL+     ++     C S      +     + +    +      ++
Subjt:  MANATSNASSSAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRAL

Query:  RQQAVTTNPLYESWVAIDQLLLGWLYNSMTP
          + V  NPL+E WV  D LLLGWLYNSMTP
Subjt:  RQQAVTTNPLYESWVAIDQLLLGWLYNSMTP

A0A5A7VPY0 Uncharacterized protein1.2e-1745.74Show/hide
Query:  TSNASSSAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQ
        T+ A  S    PT  F++P LNQ+LNQ+T++KLDRGN+LLWK LA+PIL+SYKL +    +S   PK       L TQ   ++ ++  +    +  +   
Subjt:  TSNASSSAIGNPT--FSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQ

Query:  QAVTTNPLYESWVAIDQLLLGWLYNSMTP
          VT NP YE W+  D LLLGWLYNSMTP
Subjt:  QAVTTNPLYESWVAIDQLLLGWLYNSMTP

A0A6J1DCW4 uncharacterized protein LOC1110195983.2e-1847.06Show/hide
Query:  SAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQQAVTTNPL
        + +    F+SPPLNQLLNQITS+K+DRGNFLLW+NLA+PILRSYKL            K C     + T     ++ S             Q + T NP 
Subjt:  SAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQQAVTTNPL

Query:  YESWVAIDQLLLGWLYNSM
        YE+W+ +D+LLLGWLYNSM
Subjt:  YESWVAIDQLLLGWLYNSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGCCACATCCAACGCTTCTTCTTCGGCTATAGGTAATCCAACGTTCAGTAGCCCTCCTCTCAACCAATTGTTAAATCAAATCACATCTGTGAAGCTAGATCG
AGGAAATTTCCTTCTATGGAAAAATCTAGCAATGCCCATTTTACGAAGCTATAAGCTACAAGCCATCTCTCTGGAGAAGAGCCATGTCCGTCCAAAATGTTGTTCTCGTC
AAACGAGACTGAAAACTCAGGAGCAAGTAGCTCTGAAGCAGTCATTGCTGAAGTCGATGTTTCTGCAGCATCGAGCTCTACGCCAACAGGCGGTTACTACCAATCCTCTC
TATGAATCTTGGGTAGCTATTGACCAGCTTCTTCTCGGCTGGCTTTATAACTCGATGACTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGCCACATCCAACGCTTCTTCTTCGGCTATAGGTAATCCAACGTTCAGTAGCCCTCCTCTCAACCAATTGTTAAATCAAATCACATCTGTGAAGCTAGATCG
AGGAAATTTCCTTCTATGGAAAAATCTAGCAATGCCCATTTTACGAAGCTATAAGCTACAAGCCATCTCTCTGGAGAAGAGCCATGTCCGTCCAAAATGTTGTTCTCGTC
AAACGAGACTGAAAACTCAGGAGCAAGTAGCTCTGAAGCAGTCATTGCTGAAGTCGATGTTTCTGCAGCATCGAGCTCTACGCCAACAGGCGGTTACTACCAATCCTCTC
TATGAATCTTGGGTAGCTATTGACCAGCTTCTTCTCGGCTGGCTTTATAACTCGATGACTCCCTAA
Protein sequenceShow/hide protein sequence
MANATSNASSSAIGNPTFSSPPLNQLLNQITSVKLDRGNFLLWKNLAMPILRSYKLQAISLEKSHVRPKCCSRQTRLKTQEQVALKQSLLKSMFLQHRALRQQAVTTNPL
YESWVAIDQLLLGWLYNSMTP