| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 1.2e-97 | 40.95 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ +K LW+ Q L G +R++ YL+ F RKG KM DYL MK D L AG+PV+T LI Q L GLD EYNPVV L + +SW +LQA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRLEFQNSHKTNLSFSHNAAV-NMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
FE R+E Q ++ TNL+ + A V N + RG++S N + N RG GGR RG+ G N CQVCG + H A+ C+HRFDK Y
Subjt: VFEKRLEFQNSHKTNLSFSHNAAV-NMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
Query: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
SNH+A + G+ N AF+A Q+S V D WY DSGAS+HVT E+ GK+ +V+GNG +L I
Subjt: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
Query: ----------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVN
+++SVSKLA DN + +EF + C VKD TGKV+L G+LKDGLY+L SG+ N
Subjt: ----------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVN
Query: VNV-VESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHI
+ V K WH RLGHP+ KV D +++ CK+ V +D F FCEAC++GK+H LPF++S S A+ LVH+D+WGPAP+++S GF+YYVHF+DD+SR
Subjt: VNV-VESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHI
Query: WVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
W+YPLKQKSET+ AF+ F N+ +NQF+ IK+ + D GE+ V ++
Subjt: WVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
|
|
| KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 4.1e-95 | 39.45 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ ++ +WE Q L G +R+ +L+ F +TRKG KM +YL MK AD+L AGS V+T L++Q L GLD EYNP+V L + ++W E+QA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRLE-FQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
+E RLE N L+ S N + + N RG +S F G R N RG GGR RGR +R +CQVC K GH+A CYHRF+K Y
Subjt: VFEKRLE-FQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
Query: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
+ +NS+ ++E K N+ +VASP TV D WY DSGAS+HVT + N + E GK + +GNG L I
Subjt: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
Query: --------------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSG
+++S+SKL DN +++EFH +C VKD TG++LL G +KDGLY+L STS
Subjt: --------------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSG
Query: SNVNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYS
+V ++ K WH +LGHP+ KV ++++K C + + F FCEAC+FGK H LPFQNS S A+ LVHSD+WGPAP+ S GF+YYV FLDD+S
Subjt: SNVNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYS
Query: RHIWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
R W+YPLKQKS+ AF+ F N+V+NQF+ IK + D GEF + +V
Subjt: RHIWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
|
|
| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 4.9e-96 | 40.07 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ + LW+ Q L G +R++ YL+ F TRKG KM DYL MK AD L AG+P++T LI Q L GLD EYNPVV L + +SW +LQA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEYG
FE R+E NS TNL+ + A V + N N + + + N SN+ RG GGR RGR + + CQVCG H A+ C++RFDK Y
Subjt: VFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEYG
Query: NGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI--------
SNH+A + G+ N AF+A Q+SI D WY DSGAS+HVT + + E+ GK+ +++GNG +L I
Subjt: NGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI--------
Query: ---------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVNV
+++SVSKLA DN + +EF + C VKD TGK +L G+LKDGLY+L S+ V
Subjt: ---------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVNV
Query: NVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIWV
++ ES WH +LGHP+ KV D ++K C + + +D F FCEAC++GK+H LPF+ S S A+ LVH+D+WGPAP++SS GF+YYVHF+DD++R W+
Subjt: NVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIWV
Query: YPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQ
YPLKQKS+T AF+ F N+V+NQFS IK + D GE+ V +
Subjt: YPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQ
|
|
| PNX78574.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] | 2.8e-96 | 40.69 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ +K LWE Q L +R+ YLR F TRKG KM DYL MK AD L AGSP+T LI Q L GLD +YNP+V L ++ +SW +LQA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTF--SNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKE
FE RL+ NS + + NA N+ N + Q GN +R ++ S++ N RGG RG+GR + ICQVC K GH+A+ C HR+DK
Subjt: VFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTF--SNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKE
Query: YGNGVARNSN-HNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-----
Y N+N RT N+ F+AS D WY DSGAS+HVT + E GK+ +++GNG +L I
Subjt: YGNGVARNSN-HNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-----
Query: ------------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSN
+++SVSKL DN + +EF D C VKD TGKVLL G+LKDGLY+ L N S N C
Subjt: ------------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSN
Query: VNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRH
V ++V ES WH +LGHPS V D ++K C + +D F FCEAC+ GK H LPF++S S A+ L+H+D+WGPAP+ S GF+YYVHF+DD SR
Subjt: VNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRH
Query: IWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
W+YPLKQKS+T+ AF+ F N+V+NQF+ IKI + D GEF V +V
Subjt: IWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
|
|
| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 3.9e-93 | 40.18 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ +K LW+ Q L G +R+ YL+ F T K KM YL MK AD L AGSP+++ L+ Q L GLD EYNPVV L + ISW + QA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRL-EFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
FE RL + N + NL+ S N A ++ ++ GN+ S+ G R + N RG GG RGR R RPICQ+CGK GH+A CY+RFDK Y
Subjt: VFEKRL-EFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
Query: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
NH A E S H+ FVASP D WY DSGAS+HVT + E GK+ +++GNG +L I
Subjt: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
Query: ----------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVN
+++SVSKL DN +EF + C VKD TGK LL G LKDGLY+L N N C+
Subjt: ----------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVN
Query: VNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIW
+ K +WH +LGHP+ KV + ++K + + +D F FCEAC+FGKLH LPF+ S S A+ L+H+D+WGPAP+LS F+YYVHFLDD+SR W
Subjt: VNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIW
Query: VYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQ
++PLKQKSET+ AF F N+V+NQF+ IK+ R D GE+ V +
Subjt: VYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQ
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151S6M8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-95 | 39.45 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ ++ +WE Q L G +R+ +L+ F +TRKG KM +YL MK AD+L AGS V+T L++Q L GLD EYNP+V L + ++W E+QA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRLE-FQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
+E RLE N L+ S N + + N RG +S F G R N RG GGR RGR +R +CQVC K GH+A CYHRF+K Y
Subjt: VFEKRLE-FQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
Query: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
+ +NS+ ++E K N+ +VASP TV D WY DSGAS+HVT + N + E GK + +GNG L I
Subjt: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
Query: --------------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSG
+++S+SKL DN +++EFH +C VKD TG++LL G +KDGLY+L STS
Subjt: --------------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSG
Query: SNVNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYS
+V ++ K WH +LGHP+ KV ++++K C + + F FCEAC+FGK H LPFQNS S A+ LVHSD+WGPAP+ S GF+YYV FLDD+S
Subjt: SNVNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYS
Query: RHIWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
R W+YPLKQKS+ AF+ F N+V+NQF+ IK + D GEF + +V
Subjt: RHIWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
|
|
| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 2.4e-96 | 40.07 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ + LW+ Q L G +R++ YL+ F TRKG KM DYL MK AD L AG+P++T LI Q L GLD EYNPVV L + +SW +LQA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEYG
FE R+E NS TNL+ + A V + N N + + + N SN+ RG GGR RGR + + CQVCG H A+ C++RFDK Y
Subjt: VFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEYG
Query: NGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI--------
SNH+A + G+ N AF+A Q+SI D WY DSGAS+HVT + + E+ GK+ +++GNG +L I
Subjt: NGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI--------
Query: ---------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVNV
+++SVSKLA DN + +EF + C VKD TGK +L G+LKDGLY+L S+ V
Subjt: ---------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVNV
Query: NVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIWV
++ ES WH +LGHP+ KV D ++K C + + +D F FCEAC++GK+H LPF+ S S A+ LVH+D+WGPAP++SS GF+YYVHF+DD++R W+
Subjt: NVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIWV
Query: YPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQ
YPLKQKS+T AF+ F N+V+NQFS IK + D GE+ V +
Subjt: YPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQ
|
|
| A0A2K3LJ49 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-96 | 40.69 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ +K LWE Q L +R+ YLR F TRKG KM DYL MK AD L AGSP+T LI Q L GLD +YNP+V L ++ +SW +LQA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTF--SNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKE
FE RL+ NS + + NA N+ N + Q GN +R ++ S++ N RGG RG+GR + ICQVC K GH+A+ C HR+DK
Subjt: VFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTF--SNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKE
Query: YGNGVARNSN-HNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-----
Y N+N RT N+ F+AS D WY DSGAS+HVT + E GK+ +++GNG +L I
Subjt: YGNGVARNSN-HNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-----
Query: ------------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSN
+++SVSKL DN + +EF D C VKD TGKVLL G+LKDGLY+ L N S N C
Subjt: ------------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSN
Query: VNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRH
V ++V ES WH +LGHPS V D ++K C + +D F FCEAC+ GK H LPF++S S A+ L+H+D+WGPAP+ S GF+YYVHF+DD SR
Subjt: VNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRH
Query: IWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
W+YPLKQKS+T+ AF+ F N+V+NQF+ IKI + D GEF V +V
Subjt: IWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
|
|
| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 1.9e-93 | 40.18 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ +K LW+ Q L G +R+ YL+ F T K KM YL MK AD L AGSP+++ L+ Q L GLD EYNPVV L + ISW + QA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRL-EFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
FE RL + N + NL+ S N A ++ ++ GN+ S+ G R + N RG GG RGR R RPICQ+CGK GH+A CY+RFDK Y
Subjt: VFEKRL-EFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
Query: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
NH A E S H+ FVASP D WY DSGAS+HVT + E GK+ +++GNG +L I
Subjt: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
Query: ----------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVN
+++SVSKL DN +EF + C VKD TGK LL G LKDGLY+L N N C+
Subjt: ----------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVN
Query: VNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIW
+ K +WH +LGHP+ KV + ++K + + +D F FCEAC+FGKLH LPF+ S S A+ L+H+D+WGPAP+LS F+YYVHFLDD+SR W
Subjt: VNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIW
Query: VYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQ
++PLKQKSET+ AF F N+V+NQF+ IK+ R D GE+ V +
Subjt: VYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQ
|
|
| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 5.6e-98 | 40.95 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
+ +K LW+ Q L G +R++ YL+ F RKG KM DYL MK D L AG+PV+T LI Q L GLD EYNPVV L + +SW +LQA LL
Subjt: DNAKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGRVGISWAELQADLL
Query: VFEKRLEFQNSHKTNLSFSHNAAV-NMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
FE R+E Q ++ TNL+ + A V N + RG++S N + N RG GGR RG+ G N CQVCG + H A+ C+HRFDK Y
Subjt: VFEKRLEFQNSHKTNLSFSHNAAV-NMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYHRFDKEY
Query: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
SNH+A + G+ N AF+A Q+S V D WY DSGAS+HVT E+ GK+ +V+GNG +L I
Subjt: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI-------
Query: ----------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVN
+++SVSKLA DN + +EF + C VKD TGKV+L G+LKDGLY+L SG+ N
Subjt: ----------------SHVVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVN
Query: VNV-VESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHI
+ V K WH RLGHP+ KV D +++ CK+ V +D F FCEAC++GK+H LPF++S S A+ LVH+D+WGPAP+++S GF+YYVHF+DD+SR
Subjt: VNV-VESKAVWHCRLGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHI
Query: WVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
W+YPLKQKSET+ AF+ F N+ +NQF+ IK+ + D GE+ V ++
Subjt: WVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.9e-11 | 21.11 | Show/hide |
Query: AKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSS-KMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQ--GRVGISWAELQADL
A+ + E + ++ +S A + LR+ + S + + I L AG+ + IS +L+ L Y+ ++ ++ ++ A ++ L
Subjt: AKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSS-KMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQ--GRVGISWAELQADL
Query: LVFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNN--RPICQVCGKTGHSALICYHRFDK
L ++ ++ +N H NA V+ N+ N ++ F NR T + + ++GN+ + C CG+ GH C+H
Subjt: LVFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNN--RPICQVCGKTGHSALICYHRFDK
Query: EYGNGVARNSNHNARTENSKVITSVGNSNPTPH--AFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNISHV
+ +N EN K + + T H AF+ + V + + + + +DSGAS H+ + + + VE + + + +
Subjt: EYGNGVARNSNHNARTENSKVITSVGNSNPTPH--AFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNISHV
Query: VSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKL---KTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVNVNVVESKAVWHCRLGH
+ +L D+ + LE D K+ G ++ L++ + K+ ++ + L ++NS N V + S +N + +WH R GH
Subjt: VSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKL---KTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNVNVNVVESKAVWHCRLGH
Query: PSFKVFDDIVKRCKLPVR--VNDIFLFCEACK---FGKLHALPFQNSDSRAEVSFAL--VHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIWVYPLKQKSE
S +I ++ + +N++ L CE C+ GK LPF+ + + L VHSD+ GP ++ D Y+V F+D ++ + Y +K KS+
Subjt: PSFKVFDDIVKRCKLPVR--VNDIFLFCEACK---FGKLHALPFQNSDSRAEVSFAL--VHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIWVYPLKQKSE
Query: TLSAFLHFLNIVKNQFSSTIKIFRSDNRGEF--TKVHQVC
S F F+ + F+ + DN E+ ++ Q C
Subjt: TLSAFLHFLNIVKNQFSSTIKIFRSDNRGEF--TKVHQVC
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.8e-22 | 23.84 | Show/hide |
Query: DNAKDLWEAIQELFGVQSRAEEDYL-RQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVAT-LQGRVGISWAELQAD
D A+ +W ++ L+ ++ + YL +Q++ + +L + L G + +L L Y+ + T L G+ I ++ +
Subjt: DNAKDLWEAIQELFGVQSRAEEDYL-RQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVAT-LQGRVGISWAELQAD
Query: LLVFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYH-RFDK
LL+ EK + NQ Q+ G ++ N G +G R + + R + R C C + GH C + R K
Subjt: LLVFEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALICYH-RFDK
Query: EYGNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNISHVVS
+G + N A +N N FI + ++ PE+ W VD+ AS H T + V G V +GN S
Subjt: EYGNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNISHVVS
Query: VSKLAQDNVVFLEFHVDSCLV-KDT-HTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNV---NVNVVE---SKAVWHCR
SK+A + ++ +V LV KD H + + + L + + S A + T R+ + + +N + S +WH R
Subjt: VSKLAQDNVVFLEFHVDSCLV-KDT-HTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVCSTSVRSGSNV---NVNVVE---SKAVWHCR
Query: LGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIWVYPLKQKSETLSA
+GH S K + K+ + C+ C FGK H + FQ S R LV+SD+ GP + S G +Y+V F+DD SR +WVY LK K +
Subjt: LGHPSFKVFDDIVKRCKLPVRVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLDDYSRHIWVYPLKQKSETLSA
Query: FLHFLNIVKNQFSSTIKIFRSDNRGEFT--KVHQVCS
F F +V+ + +K RSDN GE+T + + CS
Subjt: FLHFLNIVKNQFSSTIKIFRSDNRGEFT--KVHQVCS
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.7e-47 | 28.75 | Show/hide |
Query: AKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGR-VGISWAELQADLLV
A +WE +++++ S LR +Q KG+ + DY++ + T D L G P+ + +VL L EEY PV+ + + + E+ LL
Subjt: AKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGR-VGISWAELQADLLV
Query: FEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGR--NRGRGRWQGNN---RPI---CQVCGKTGHSALICYH
E ++ S T + + N AV+ NT N+ N NGNR+ + Y N+ N + + + NN +P CQ+CG GHSA C
Subjt: FEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGR--NRGRGRWQGNN---RPI---CQVCGKTGHSALICYH
Query: RFDKEYGNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPF-VASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI
++ ++SV NS P F Q + SP + +W +DSGA+ H+T + NN+S Y G D V++ +G + I
Subjt: RFDKEYGNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPF-VASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNI
Query: SH---------------------------VVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVC
SH ++SV +L N V +EF S VKD +TG LL G KD LY+ + + S F SSK+ +
Subjt: SH---------------------------VVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYKLKTSGAVTGSALEFLENSSKSANNIVC
Query: STSVRSGSNVNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPV-RVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYY
+ WH RLGHP+ + + ++ L V + FL C C K + +PF S + ++SD+W +P+LS D +RYY
Subjt: STSVRSGSNVNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPV-RVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYY
Query: VHFLDDYSRHIWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQVCS
V F+D ++R+ W+YPLKQKS+ F+ F N+++N+F + I F SDN GEF + + S
Subjt: VHFLDDYSRHIWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQVCS
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.5e-43 | 27.75 | Show/hide |
Query: AKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGR-VGISWAELQADLLV
A +WE +++++ S LR I T D L G P+ + +VL L ++Y PV+ + + S E+ L+
Subjt: AKDLWEAIQELFGVQSRAEEDYLRQIFQQTRKGSSKMADYLRIMKTHADNLGQAGSPVTTRSLISQVLLGLDEEYNPVVATLQGR-VGISWAELQADLLV
Query: FEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALIC--YHRFDKEY
E +L NS + + + N + +N N+ ++ +N N + +++ G+ NR + G CQ+C GHSA C H+F
Subjt: FEKRLEFQNSHKTNLSFSHNAAVNMVNTRGQNSGNQRQSQQFNGNRSTFSNYPNQRGGNGGRNRGRGRWQGNNRPICQVCGKTGHSALIC--YHRFDKEY
Query: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNISH-----
T N + TS + P A +A S P+ A+ +W +DSGA+ H+T + NN+S Y G D V+I +G + I+H
Subjt: GNGVARNSNHNARTENSKVITSVGNSNPTPHAFIAGQSSIPFVASPETVVDPHWYVDSGASSHVTGNHNNISHPVEYGGKDIVVIGNGHQLNISH-----
Query: ----------------------VVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYK--LKTSGAVTGSALEFLENSSKSANNIVCSTSVR
++SV +L N V +EF S VKD +TG LL G KD LY+ + +S AV+ A CS +
Subjt: ----------------------VVSVSKLAQDNVVFLEFHVDSCLVKDTHTGKVLLTGVLKDGLYK--LKTSGAVTGSALEFLENSSKSANNIVCSTSVR
Query: SGSNVNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPV-RVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLD
S WH RLGHPS + + ++ LPV + L C C K H +PF NS + ++SD+W +P+LS D +RYYV F+D
Subjt: SGSNVNVNVVESKAVWHCRLGHPSFKVFDDIVKRCKLPV-RVNDIFLFCEACKFGKLHALPFQNSDSRAEVSFALVHSDLWGPAPVLSSDGFRYYVHFLD
Query: DYSRHIWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQVCS
++R+ W+YPLKQKS+ F+ F ++V+N+F + I SDN GEF + S
Subjt: DYSRHIWVYPLKQKSETLSAFLHFLNIVKNQFSSTIKIFRSDNRGEFTKVHQVCS
|
|
