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Lag0005142 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005142
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription factor MYB1R1-like
Genome locationchr6:11135128..11136472
RNA-Seq ExpressionLag0005142
SyntenyLag0005142
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573031.1 hypothetical protein SDJN03_26918, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2455.81Show/hide
Query:  FLAG---IAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMP
        FL G   + + + RG+ RNFVKTRTPTQ                               VKVAAEE QIQLQDNSS+LQSLLP PPP+TCNIN Y H MP
Subjt:  FLAG---IAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMP

Query:  TFPLSVCLAVLPVPIPMDNLTLGHETLIL
        TFPLSVC AVLPVP P++NLTLG E L L
Subjt:  TFPLSVCLAVLPVPIPMDNLTLGHETLIL

XP_022137510.1 transcription factor MYB1R1-like [Momordica charantia]4.8e-2454.47Show/hide
Query:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL
        L  + + + RG+ RNFVKTRTPTQ                               V VAAEEDQIQLQ NSSQLQSLLP PPP+ CNIN Y H+MP FPL
Subjt:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL

Query:  SVCLAVLPVPIPMDNLTLGHETL
        SVC A+LPVPIPM+ LTLGH+ L
Subjt:  SVCLAVLPVPIPMDNLTLGHETL

XP_022954795.1 transcription factor MYB1R1-like [Cucurbita moschata]2.3e-2657.69Show/hide
Query:  FLAG---IAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMP
        FL G   + + + RG+ RNFVKTRTPTQ                               VKVAAEE QIQLQDNSS+LQSLLP PPP+TCNINEY H MP
Subjt:  FLAG---IAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMP

Query:  TFPLSVCLAVLPVPIPMDNLTLGHETLILT
        TFPLSVC AVLPVP P++NLTLGHE L LT
Subjt:  TFPLSVCLAVLPVPIPMDNLTLGHETLILT

XP_022994648.1 transcription factor MYB1R1-like [Cucurbita maxima]3.1e-2355.2Show/hide
Query:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL
        L  + + + RG+ RNFVKTRTPTQ                               VKVAAEE QIQLQDNSS+LQSLLP PPP+TCNIN Y H MPTFPL
Subjt:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL

Query:  SVCLAVLPVPIPMDNLTLGHETLIL
        SVC AVLPVP P++N TLG E L L
Subjt:  SVCLAVLPVPIPMDNLTLGHETLIL

XP_023541660.1 transcription factor MYB1R1-like [Cucurbita pepo subsp. pepo]4.1e-2355.2Show/hide
Query:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL
        L  + + + RG+ RNFVKTRTPTQ                               VKVAAEE QIQLQDNSS+LQSLLP PPP+TCNIN Y H MPTFPL
Subjt:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL

Query:  SVCLAVLPVPIPMDNLTLGHETLIL
        SVC AVLPVP P++NLTL  E L L
Subjt:  SVCLAVLPVPIPMDNLTLGHETLIL

TrEMBL top hitse value%identityAlignment
A0A5A7ULN5 Transcription factor MYB1R11.2e-2051.24Show/hide
Query:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL
        L  + + + RG+ RNFVKTRTPTQ                               VK AAEE+QIQ+QDNSSQLQSLLP PPP+TCNIN Y  M+PTFPL
Subjt:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL

Query:  SVCLAVLPVPIPMDNLTLGHE
        SVC A++P+PIPM+  T  HE
Subjt:  SVCLAVLPVPIPMDNLTLGHE

A0A5D3BJ54 Transcription factor MYB1R11.2e-2051.24Show/hide
Query:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL
        L  + + + RG+ RNFVKTRTPTQ                               VK AAEE+QIQ+QDNSSQLQSLLP PPP+TCNIN Y  M+PTFPL
Subjt:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL

Query:  SVCLAVLPVPIPMDNLTLGHE
        SVC A++P+PIPM+  T  HE
Subjt:  SVCLAVLPVPIPMDNLTLGHE

A0A6J1C6U7 transcription factor MYB1R1-like2.3e-2454.47Show/hide
Query:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL
        L  + + + RG+ RNFVKTRTPTQ                               V VAAEEDQIQLQ NSSQLQSLLP PPP+ CNIN Y H+MP FPL
Subjt:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL

Query:  SVCLAVLPVPIPMDNLTLGHETL
        SVC A+LPVPIPM+ LTLGH+ L
Subjt:  SVCLAVLPVPIPMDNLTLGHETL

A0A6J1GTF0 transcription factor MYB1R1-like1.1e-2657.69Show/hide
Query:  FLAG---IAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMP
        FL G   + + + RG+ RNFVKTRTPTQ                               VKVAAEE QIQLQDNSS+LQSLLP PPP+TCNINEY H MP
Subjt:  FLAG---IAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMP

Query:  TFPLSVCLAVLPVPIPMDNLTLGHETLILT
        TFPLSVC AVLPVP P++NLTLGHE L LT
Subjt:  TFPLSVCLAVLPVPIPMDNLTLGHETLILT

A0A6J1K5R0 transcription factor MYB1R1-like1.5e-2355.2Show/hide
Query:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL
        L  + + + RG+ RNFVKTRTPTQ                               VKVAAEE QIQLQDNSS+LQSLLP PPP+TCNIN Y H MPTFPL
Subjt:  LAGIAESEERGLERNFVKTRTPTQ-------------------------------VKVAAEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPL

Query:  SVCLAVLPVPIPMDNLTLGHETLIL
        SVC AVLPVP P++N TLG E L L
Subjt:  SVCLAVLPVPIPMDNLTLGHETLIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGCGAAGTCGGATTTGATATTTTCAAAGTCGGGACTTCAACAGTAATCAAACCCTCGTTTTCTTCCGGTTTCTCTCTCAGACCCCTCGTTTCCTCTCGCTGGAT
TTCGCTGCCGGTTACGCTTGTGCGGACGATGCTGTCCCCAATTCCGGTGAGAATCGCGAGCGCGAACGCAAGCGAGAGAGAAGGATGCGTCTGGGTAGTTCTGAGTAGCG
TGAACGGAGGAAGAGCACAAACTTTTCTTGCTGGGATTGCAGAAAGTGAGGAAAGGGGATTGGAGAGGAATTTTGTTAAGACTCGAACCCCAACTCAGGTAAAGGTCGCT
GCTGAGGAAGACCAAATTCAACTTCAAGATAATTCCTCCCAATTGCAATCCCTGTTGCCGCATCCACCACCTAAAACTTGCAACATAAATGAATATCAACATATGATGCC
GACTTTTCCTTTATCTGTTTGCCTTGCAGTCTTACCCGTGCCAATTCCAATGGACAACTTAACACTTGGGCATGAAACTTTGATATTAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGCGAAGTCGGATTTGATATTTTCAAAGTCGGGACTTCAACAGTAATCAAACCCTCGTTTTCTTCCGGTTTCTCTCTCAGACCCCTCGTTTCCTCTCGCTGGAT
TTCGCTGCCGGTTACGCTTGTGCGGACGATGCTGTCCCCAATTCCGGTGAGAATCGCGAGCGCGAACGCAAGCGAGAGAGAAGGATGCGTCTGGGTAGTTCTGAGTAGCG
TGAACGGAGGAAGAGCACAAACTTTTCTTGCTGGGATTGCAGAAAGTGAGGAAAGGGGATTGGAGAGGAATTTTGTTAAGACTCGAACCCCAACTCAGGTAAAGGTCGCT
GCTGAGGAAGACCAAATTCAACTTCAAGATAATTCCTCCCAATTGCAATCCCTGTTGCCGCATCCACCACCTAAAACTTGCAACATAAATGAATATCAACATATGATGCC
GACTTTTCCTTTATCTGTTTGCCTTGCAGTCTTACCCGTGCCAATTCCAATGGACAACTTAACACTTGGGCATGAAACTTTGATATTAACTTGA
Protein sequenceShow/hide protein sequence
MSCEVGFDIFKVGTSTVIKPSFSSGFSLRPLVSSRWISLPVTLVRTMLSPIPVRIASANASEREGCVWVVLSSVNGGRAQTFLAGIAESEERGLERNFVKTRTPTQVKVA
AEEDQIQLQDNSSQLQSLLPHPPPKTCNINEYQHMMPTFPLSVCLAVLPVPIPMDNLTLGHETLILT