; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005159 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005159
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:11323057..11325854
RNA-Seq ExpressionLag0005159
SyntenyLag0005159
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]2.9e-3344.75Show/hide
Query:  LVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVT
        LVEWA  YV+ FRE   +S            V+W  P    YK+N DASFL+    AGLGII+R+  GQVM SAT   +N++ VDMAE    V+ L+L +
Subjt:  LVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVT

Query:  DMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP
         +G+ P ILETDSSR+F + ++  ED+SE G I+  A   +  +L   F+FV REGN+A H LAR A+      +WME  P
Subjt:  DMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.5e-2639.23Show/hide
Query:  LVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVT
        LVEWA  Y + FRE    S  +         ++W+ P  G YK+N DASFL+    AGLGII+ +  GQVM +AT   +N++ VDMAE  A V+ L+L +
Subjt:  LVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVT

Query:  DMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP
        ++G+ PA+                ED+SE G I+  A   +  +L   F+FV REGN+A H LAR A+      +WME  P
Subjt:  DMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]9.8e-2132.67Show/hide
Query:  MWSTRNKV--RLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDN
        +W+ RN+           S LV W++ Y+  ++   RSS             +WR P     KVN DA+F      AG+G+I+RD  G V L+A      
Subjt:  MWSTRNKV--RLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDN

Query:  VRDVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQ-VLFHFVHREGNQAVHRLARLAIAQWSDEVWMET
          DVD  EG+AV + + L  + G     +ETDS R+F +L  +  D SE+G++ +   +   S+ + V F F HR GN   H LA+LA+     ++W+E 
Subjt:  VRDVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQ-VLFHFVHREGNQAVHRLARLAIAQWSDEVWMET

Query:  CP
         P
Subjt:  CP

XP_028115288.1 uncharacterized protein LOC114313136 isoform X3 [Camellia sinensis]1.3e-2039.33Show/hide
Query:  VVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELG
        V W AP NGW K+NFD +    L   G+G+++R+ LG+VM + +       D D AE YA  K++EL  D+GL    LE DS R+ ++L  E E +SE G
Subjt:  VVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELG

Query:  MIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP
         I+   +    S  +     V R+GN   H LAR+A  Q   +VWME  P
Subjt:  MIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP

XP_042939569.1 uncharacterized protein LOC122274612 [Carya illinoinensis]3.2e-2434.22Show/hide
Query:  PSGLVEWAKGYVVAFREV-GRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSL
        P G++  AK  ++ ++      + E+  +   RE+  W+ P  G+ KVN+DA+ +    K G+GI++RD +G  M++    + +V D  +AE  A+ K+L
Subjt:  PSGLVEWAKGYVVAFREV-GRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSL

Query:  ELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCPRF
        EL  D+ +  AI E D+  V   +NRE ED+S +G +I D  + F  N      F HRE N   H LAR A+     +VW+E  P F
Subjt:  ELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCPRF

TrEMBL top hitse value%identityAlignment
A0A2N9EVK9 Reverse transcriptase domain-containing protein1.6e-2132.66Show/hide
Query:  MWSTRNKVRLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVR
        +W  RNK+R+     P   V      +    E  R +    ++      V W+ PR   YK+N+D +     ++AG+G+IVRD +G VM S T       
Subjt:  MWSTRNKVRLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVR

Query:  DVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP
         V   E +AV +S++   ++G+  A  E DS  +   LN  R  ++  G++IADA M         F  V R+GN+  H LAR A +  S EVWME+ P
Subjt:  DVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP

A0A2N9I7P8 Uncharacterized protein4.7e-2133.67Show/hide
Query:  MWSTRNKVRLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVR
        +W  RNK+R+     P   V      +    E  R +     +      V W+ PR   YK+N+D +     ++AG+G+IVRD LG VM S T       
Subjt:  MWSTRNKVRLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVR

Query:  DVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP
         V   E +AV +S++   ++G+  A  E DS  +   LN  R  ++  G++IADA M         F  V REGN+  H LAR A +  S EVWME+ P
Subjt:  DVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP

A0A6J1CIF1 uncharacterized protein LOC1110112371.4e-3344.75Show/hide
Query:  LVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVT
        LVEWA  YV+ FRE   +S            V+W  P    YK+N DASFL+    AGLGII+R+  GQVM SAT   +N++ VDMAE    V+ L+L +
Subjt:  LVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVT

Query:  DMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP
         +G+ P ILETDSSR+F + ++  ED+SE G I+  A   +  +L   F+FV REGN+A H LAR A+      +WME  P
Subjt:  DMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP

A0A6J1DAR4 uncharacterized protein LOC1110189542.2e-2639.23Show/hide
Query:  LVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVT
        LVEWA  Y + FRE    S  +         ++W+ P  G YK+N DASFL+    AGLGII+ +  GQVM +AT   +N++ VDMAE  A V+ L+L +
Subjt:  LVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAVVKSLELVT

Query:  DMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP
        ++G+ PA+                ED+SE G I+  A   +  +L   F+FV REGN+A H LAR A+      +WME  P
Subjt:  DMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCP

A0A6J1DBJ7 uncharacterized protein LOC1110189734.7e-2132.67Show/hide
Query:  MWSTRNKV--RLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDN
        +W+ RN+           S LV W++ Y+  ++   RSS             +WR P     KVN DA+F      AG+G+I+RD  G V L+A      
Subjt:  MWSTRNKV--RLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDN

Query:  VRDVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQ-VLFHFVHREGNQAVHRLARLAIAQWSDEVWMET
          DVD  EG+AV + + L  + G     +ETDS R+F +L  +  D SE+G++ +   +   S+ + V F F HR GN   H LA+LA+     ++W+E 
Subjt:  VRDVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQ-VLFHFVHREGNQAVHRLARLAIAQWSDEVWMET

Query:  CP
         P
Subjt:  CP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.2e-0725.38Show/hide
Query:  MWSTRNKVRLQGA--DRPSGL-------VEWAKGYVVAFREV-GRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVML
        +W +RN++  +G   D P  L        EW+       RE+ G++SG    +      V W+AP   W K N DA++     + G+G I+R+  G V+ 
Subjt:  MWSTRNKVRLQGA--DRPSGL-------VEWAKGYVVAFREV-GRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVML

Query:  SATFTKDNVRDVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIA
                 ++V  AE  A+  ++  ++       I E+D+  +  +LN + +    L   + D         +V F F  R GN+   R+AR +I+
Subjt:  SATFTKDNVRDVDMAEGYAVVKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCGACCCGAAATAAAGTTCGTCTTCAAGGGGCTGATAGGCCGAGTGGGCTAGTGGAATGGGCGAAGGGGTATGTGGTGGCTTTTCGTGAGGTTGGGAGGAGTAG
TGGGGAAGTGGGGTGGGAGACGGTTGGTCGGGAGAGGGTAGTGTGGCGGGCCCCGAGGAATGGCTGGTATAAGGTGAATTTTGATGCCTCTTTCCTTTCTCATTTGTCCA
AGGCCGGCCTAGGGATAATTGTGCGGGATCCTTTGGGCCAAGTAATGCTGTCGGCGACCTTTACTAAGGATAATGTGAGAGATGTTGACATGGCTGAAGGATATGCGGTC
GTGAAAAGTTTGGAGTTGGTGACAGATATGGGTTTGGGTCCAGCAATTCTTGAGACGGATTCAAGTAGAGTATTCCAGATCCTTAATCGAGAACGTGAGGATGTTTCTGA
GCTAGGTATGATTATTGCAGATGCACTAATGGCTTTTCCCTCTAATTTGCAGGTACTGTTTCATTTCGTTCACCGTGAAGGGAATCAGGCGGTGCACCGATTGGCGAGGT
TAGCAATAGCCCAGTGGAGTGATGAGGTTTGGATGGAGACTTGTCCTAGGTTTGAAGGCCTAGACCGGTTTTATGGGGTTCATAAGTCTGTTGTCACTCCGATAGGGGTA
AGGGGTATGGATTACATGTGGATTGATGAGGGTATTTCGTTCAGGGGTGGTGAGCCTAAGGCCACAAACCTACATGGAACAATTCATATTTATCTAGGACGCAAGAGGAT
GGAGAGTTTTTGTTCCCTTCTGACTGTCGATTGTATTGGTTTGTCGTTGGGCAATCTGCTTGCTTACAATGAAAGAAAGCGTCTCTGTCGACGTCATCTACTGTGTCGGA
GAGCCCTTTCTATTGACGGATTGCCTTCAACGGTGTTTTCTCTTGACGCGGATTTTATGGCGTCGGGAAAGCCGGTTGCTGCCGATACCGTTAAAAGTGGCGTCGGCAAA
GGTTCTGTCGACGGCCTTCTTTCGACTTTCTTTCCAACGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCGACCCGAAATAAAGTTCGTCTTCAAGGGGCTGATAGGCCGAGTGGGCTAGTGGAATGGGCGAAGGGGTATGTGGTGGCTTTTCGTGAGGTTGGGAGGAGTAG
TGGGGAAGTGGGGTGGGAGACGGTTGGTCGGGAGAGGGTAGTGTGGCGGGCCCCGAGGAATGGCTGGTATAAGGTGAATTTTGATGCCTCTTTCCTTTCTCATTTGTCCA
AGGCCGGCCTAGGGATAATTGTGCGGGATCCTTTGGGCCAAGTAATGCTGTCGGCGACCTTTACTAAGGATAATGTGAGAGATGTTGACATGGCTGAAGGATATGCGGTC
GTGAAAAGTTTGGAGTTGGTGACAGATATGGGTTTGGGTCCAGCAATTCTTGAGACGGATTCAAGTAGAGTATTCCAGATCCTTAATCGAGAACGTGAGGATGTTTCTGA
GCTAGGTATGATTATTGCAGATGCACTAATGGCTTTTCCCTCTAATTTGCAGGTACTGTTTCATTTCGTTCACCGTGAAGGGAATCAGGCGGTGCACCGATTGGCGAGGT
TAGCAATAGCCCAGTGGAGTGATGAGGTTTGGATGGAGACTTGTCCTAGGTTTGAAGGCCTAGACCGGTTTTATGGGGTTCATAAGTCTGTTGTCACTCCGATAGGGGTA
AGGGGTATGGATTACATGTGGATTGATGAGGGTATTTCGTTCAGGGGTGGTGAGCCTAAGGCCACAAACCTACATGGAACAATTCATATTTATCTAGGACGCAAGAGGAT
GGAGAGTTTTTGTTCCCTTCTGACTGTCGATTGTATTGGTTTGTCGTTGGGCAATCTGCTTGCTTACAATGAAAGAAAGCGTCTCTGTCGACGTCATCTACTGTGTCGGA
GAGCCCTTTCTATTGACGGATTGCCTTCAACGGTGTTTTCTCTTGACGCGGATTTTATGGCGTCGGGAAAGCCGGTTGCTGCCGATACCGTTAAAAGTGGCGTCGGCAAA
GGTTCTGTCGACGGCCTTCTTTCGACTTTCTTTCCAACGTCCTAA
Protein sequenceShow/hide protein sequence
MWSTRNKVRLQGADRPSGLVEWAKGYVVAFREVGRSSGEVGWETVGRERVVWRAPRNGWYKVNFDASFLSHLSKAGLGIIVRDPLGQVMLSATFTKDNVRDVDMAEGYAV
VKSLELVTDMGLGPAILETDSSRVFQILNREREDVSELGMIIADALMAFPSNLQVLFHFVHREGNQAVHRLARLAIAQWSDEVWMETCPRFEGLDRFYGVHKSVVTPIGV
RGMDYMWIDEGISFRGGEPKATNLHGTIHIYLGRKRMESFCSLLTVDCIGLSLGNLLAYNERKRLCRRHLLCRRALSIDGLPSTVFSLDADFMASGKPVAADTVKSGVGK
GSVDGLLSTFFPTS