; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005160 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005160
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr6:11325936..11326562
RNA-Seq ExpressionLag0005160
SyntenyLag0005160
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50764.1 hypothetical protein EZV62_023288 [Acer yangbiense]9.4e-3543.93Show/hide
Query:  WGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLFS
        WG+E+L  G+R R+G+G  I +Y  +W+PR    +V SP  L  +A V+ LM     WDQ LV   F   EV LILSIP+  +  ED+ +WH++K G FS
Subjt:  WGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLFS

Query:  VKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC
        +KS YK+A +  L  +AS S    L  WWK  W + LPSKI++F W+ C   LPT+  L +RG+ + D+C FC
Subjt:  VKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.7e-4246.67Show/hide
Query:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASR-GWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGL
        +WG+++L+ G+RWR+GNG+ + IYG NW+P    LK+ S   LP  + V+ L+     GW   +V   F   E + ILSIPI +   ED +IW+YEK+G+
Subjt:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASR-GWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGL

Query:  FSVKSGYKLA-QSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKRG
        +SV+SGYK+A  +    +  SSSS   ++ WW G WKM +P+KIKVFLWRLCL+RLPT  NL +RGV++ + C FC + G
Subjt:  FSVKSGYKLA-QSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKRG

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]1.0e-3641.48Show/hide
Query:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF
        +WG+++L+ G RWR+GNGE+I+I  SNWIPR T  K+    SLP  A V+ L+  ++ W+++++ Q F   +  +I SI + + P ED +IWHY++ GL+
Subjt:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF

Query:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEK
        SVKSGY+LA  +    E  +SS  + Q+ W+  WK+ LP KIK+F+W+     LPT +NL RR +    +C  C++
Subjt:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEK

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.5e-3741.38Show/hide
Query:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF
        +WG+++L  G RWR+GNG+ + +YG+NWIPR T  K  S  S+  D TVA L+   + W + L+ QHF   +   I+ IP+ + P ED +IWHY+K G +
Subjt:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF

Query:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC
        SVKSGY++A  +    + S S  N  Q+ W+  WK+ +P K+K+FLWR   + LPT +NL ++ V    +C  C
Subjt:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]5.5e-3538.42Show/hide
Query:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF
        +WG++++  G +WR+GNG+ I ++  NW+PR    K  S  SLP DA VA L+     W++ L+ +HF   +   I+ I + + P +D VIWHY+K G +
Subjt:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF

Query:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKR
        SVKSGY++A ++    + +SS+  + ++ W   W +TLP KI++F WR   N LP+ +NL +R V    +C FC K+
Subjt:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKR

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein4.5e-3540.68Show/hide
Query:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF
        +WG++++  G+RWR+G G+++KIY S+WIPR    K  S  +L  D TVA L+  ++ W ++L++QHFN  +  LI  I +   P  D ++WHY+K G +
Subjt:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF

Query:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKR
        SVKSGY++A  +      SSSS N  Q  W   W + LP KIK+F+W+   N LPT +NL RR +    +C  C+ +
Subjt:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKR

A0A5C7H1A9 zf-RVT domain-containing protein4.5e-3543.93Show/hide
Query:  WGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLFS
        WG+E+L  G+R R+G+G  I +Y  +W+PR    +V SP  L  +A V+ LM     WDQ LV   F   EV LILSIP+  +  ED+ +WH++K G FS
Subjt:  WGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLFS

Query:  VKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC
        +KS YK+A +  L  +AS S    L  WWK  W + LPSKI++F W+ C   LPT+  L +RG+ + D+C FC
Subjt:  VKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC

A0A5P1EL44 Uncharacterized protein1.0e-3443.89Show/hide
Query:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF
        +WGKE+L+MG+RWRVG+G QI++    WIP+    +V S  ++P +ATVA L+  SR W+  L+ + F  +E  +ILSIP+ ++   D ++WHY K+G +
Subjt:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF

Query:  SVKSGYKLAQSVTLARE--ASSSSL--NSL-QDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCE
        SVKSGY +A      RE  AS SS+  NSL    WK  W + LP+KIKVFLWR C   +P  D L ++ V +   C  C+
Subjt:  SVKSGYKLAQSVTLARE--ASSSSL--NSL-QDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCE

A0A6J1DAR4 uncharacterized protein LOC1110189541.3e-4246.67Show/hide
Query:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASR-GWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGL
        +WG+++L+ G+RWR+GNG+ + IYG NW+P    LK+ S   LP  + V+ L+     GW   +V   F   E + ILSIPI +   ED +IW+YEK+G+
Subjt:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASR-GWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGL

Query:  FSVKSGYKLA-QSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKRG
        +SV+SGYK+A  +    +  SSSS   ++ WW G WKM +P+KIKVFLWRLCL+RLPT  NL +RGV++ + C FC + G
Subjt:  FSVKSGYKLA-QSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKRG

A0A803NGM9 Uncharacterized protein1.7e-3743.1Show/hide
Query:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF
        MWGK+++  G RWRVGNGE +++    W+PR  + K+     LP +  VA L      WD+  V   FN  +  LILS+P      ED ++WHY K+G +
Subjt:  MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLF

Query:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC
        +VKSGYK+A S  LA E   S      DWWK  W++ +P KIK F+W+L  N +PT  NL +RGVD+ ++CV C
Subjt:  SVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.0e-1024.31Show/hide
Query:  GKEILEMGVRWRVGNGEQIKIYGSNWI----PRDTNLKVSSPISLPPDATVAGLMTASRG---WDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYE
        G  +L+ G R  +G+G+ I+I   N +    PR  N + +       + T+  L         WD + + Q  + ++   I  I + +    D +IW+Y 
Subjt:  GKEILEMGVRWRVGNGEQIKIYGSNWI----PRDTNLKVSSPISLPPDATVAGLMTASRG---WDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYE

Query:  KSGLFSVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEK
         +G ++V+SGY L          + +  +   D     W + +  K+K FLWR     L T + L  RG+ +   C  C +
Subjt:  KSGLFSVKSGYKLAQSVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEK

AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-1430.43Show/hide
Query:  KEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPD--ATVAGLMTAS-------RGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHY
        +EIL  G R  VGNGE I I+   W+             +PP   A+V+ ++  S       R W + ++E  F   E +LI  +        DS  W Y
Subjt:  KEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPD--ATVAGLMTAS-------RGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHY

Query:  EKSGLFSVKSGYKLAQSVTLAR----EASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC
          SG ++VKSGY +   +   R    E S  SLN +   ++  WK     KI+ FLW+   N LP    L  R +     C+ C
Subjt:  EKSGLFSVKSGYKLAQSVTLAR----EASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGCAAGGAGATTTTAGAGATGGGTGTTCGTTGGCGAGTTGGGAATGGGGAACAAATCAAGATCTATGGATCTAACTGGATTCCGAGGGATACTAATTTGAAAGT
TAGCTCGCCGATATCCTTGCCTCCAGATGCCACGGTGGCGGGACTGATGACGGCTTCGAGGGGGTGGGACCAAACCCTGGTGGAACAACACTTTAATGCCGCAGAGGTAA
GACTCATTTTATCTATCCCCATTAGACAACATCCCCCGGAGGACTCAGTTATCTGGCATTATGAAAAGTCTGGCCTCTTCTCGGTTAAAAGTGGATACAAGTTGGCCCAG
TCAGTCACCCTAGCACGAGAGGCTTCATCTTCATCCCTTAACTCTCTTCAGGATTGGTGGAAGGGATGTTGGAAGATGACGCTCCCAAGTAAGATAAAGGTGTTCCTTTG
GAGATTGTGTCTGAACAGGCTGCCGACAATTGACAACCTAATAAGAAGGGGTGTGGACCTGCTAGATGTATGCGTTTTCTGCGAGAAGCGGGGGAATCTAGCATGCATCT
TTTTTGGGAATGCAAATGGGCCAAATCGATCCTACGAGAAGCGGGTTTTGGGGAGATCTTGGAGAGAGTCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGCAAGGAGATTTTAGAGATGGGTGTTCGTTGGCGAGTTGGGAATGGGGAACAAATCAAGATCTATGGATCTAACTGGATTCCGAGGGATACTAATTTGAAAGT
TAGCTCGCCGATATCCTTGCCTCCAGATGCCACGGTGGCGGGACTGATGACGGCTTCGAGGGGGTGGGACCAAACCCTGGTGGAACAACACTTTAATGCCGCAGAGGTAA
GACTCATTTTATCTATCCCCATTAGACAACATCCCCCGGAGGACTCAGTTATCTGGCATTATGAAAAGTCTGGCCTCTTCTCGGTTAAAAGTGGATACAAGTTGGCCCAG
TCAGTCACCCTAGCACGAGAGGCTTCATCTTCATCCCTTAACTCTCTTCAGGATTGGTGGAAGGGATGTTGGAAGATGACGCTCCCAAGTAAGATAAAGGTGTTCCTTTG
GAGATTGTGTCTGAACAGGCTGCCGACAATTGACAACCTAATAAGAAGGGGTGTGGACCTGCTAGATGTATGCGTTTTCTGCGAGAAGCGGGGGAATCTAGCATGCATCT
TTTTTGGGAATGCAAATGGGCCAAATCGATCCTACGAGAAGCGGGTTTTGGGGAGATCTTGGAGAGAGTCCGAGTAG
Protein sequenceShow/hide protein sequence
MWGKEILEMGVRWRVGNGEQIKIYGSNWIPRDTNLKVSSPISLPPDATVAGLMTASRGWDQTLVEQHFNAAEVRLILSIPIRQHPPEDSVIWHYEKSGLFSVKSGYKLAQ
SVTLAREASSSSLNSLQDWWKGCWKMTLPSKIKVFLWRLCLNRLPTIDNLIRRGVDLLDVCVFCEKRGNLACIFFGNANGPNRSYEKRVLGRSWRESE