CuGenDBv2

Gene ID	Lag0005171
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	selenoprotein H-like
Genome location	chr6:11448704..11453213
RNA-Seq Expression	Lag0005171
Synteny	Lag0005171
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6585418.1 Fasciclin-like arabinogalactan protein 5, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-67

79.56

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E AAAKP PASSRVTR S RLAANSK DL  EEPV +LPK KKAKR PKENGKAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEE----LTNQSIFDGGDL
        QSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIR EDGEKFISLLDMKRPFTRMKELDMEE        S FDGG+L
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEE----LTNQSIFDGGDL

XP_022950994.1 selenoprotein H-like isoform X1 [Cucurbita moschata]

7.3e-65

79.53

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E A AKP PASSRVTR S RLA NSK DL  EE V +LPK KKAKR PKENGKAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        QSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIR EDGEKFISLLDMKRPFTRMKELDMEE+ +  I
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

XP_023002520.1 selenoprotein H-like isoform X1 [Cucurbita maxima]

1.6e-64

79.53

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E AAAKP P SSRVTR S RLAANSK DL  EEPV +LPK KKAKRAPKEN KAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        QSFKKRA++VQ GLE GVPGITVLLNPDK RRGCFEIR EDGEKFISLLDMKRPFT+MKELDMEE+ +  I
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

XP_023536837.1 selenoprotein H-like [Cucurbita pepo subsp. pepo]

4.5e-67

81.87

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E AAAKP PASSR TR S RLAANSK DL  EEPV +LPK KKAKRAPKENGKAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        QSFKKRAI+VQ GLE GVPGITVLLNPDKPRRGCFEIR EDGEKFISLLDMKRPFTRMKELDMEE+ +  I
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

XP_038886764.1 selenoprotein H [Benincasa hispida]

2.1e-64

80.7

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAP+KR+K QE EPAA K APASSRVTRSSARLAANSK D   +E V E  KSKKAKRAPKENGK +EV NEG EVDAA EKL +D K RTVVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        QSFKKRAIQVQ GLENGVPGITV+LNPD PRRGCFEIR EDGEKFISLLDMKRPFTRMKELDMEE+ +  I
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPC9 Uncharacterized protein

9.0e-61

77.19

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAP+KRTK QE +    KPAPA+SR+TRSSARLAANSK DL     V ELPKSKKAKRAPKENGK EEV N+  +VD    KL +D+K RTVVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIR EDGEKFISLLDMKRPFTRMKEL+M+E+ +  I
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

A0A1S3BBW1 selenoprotein H

1.1e-61

78.36

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAP+KR+K QE E A  KPAPA+SRVTRSSARLAANSK DL     V ELPKSKKAKRAPKENGK EEV N+  +VD   EK  +D+K RTVVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIR EDG+KFISLLDMKRPFTRMKELDM+E+ +  I
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

A0A6J1GHF7 selenoprotein H-like isoform X1

3.5e-65

79.53

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E A AKP PASSRVTR S RLA NSK DL  EE V +LPK KKAKR PKENGKAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        QSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIR EDGEKFISLLDMKRPFTRMKELDMEE+ +  I
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

A0A6J1K9R2 selenoprotein H-like

9.6e-63

77.01

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Query:  MAPKKRTKTQEGEPAAA---KPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHC
        MAP+KR+K QE +PAAA   KPAP SS VTR S RLA NS  DL  EE V ELPKSKK KRAPKENGKA+EVGNEGEE+DAAS+KL +D+K RTVVIE C
Subjt:  MAPKKRTKTQEGEPAAA---KPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHC

Query:  KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        KQCQSFKKRAIQVQ+GLENGV GITVLLNP+KPR+GCFEIR +DGEKFISLLDMKRPFTRMKEL+MEE+ +  I
Subjt:  KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

A0A6J1KP64 selenoprotein H-like isoform X1

7.8e-65

79.53

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E AAAKP P SSRVTR S RLAANSK DL  EEPV +LPK KKAKRAPKEN KAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
        QSFKKRA++VQ GLE GVPGITVLLNPDK RRGCFEIR EDGEKFISLLDMKRPFT+MKELDMEE+ +  I
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

SwissProt top hits

e value

%identity

Alignment

Q3UQA7 Selenoprotein H

5.1e-05

37.33

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Query:  NGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI
        +G+  + G    E     EKL E   G TVVIEHC   + + + A  +   L+   P + V +NP KPRRG FE+
Subjt:  NGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI

Q8IZQ5 Selenoprotein H

4.4e-04

35.62

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Query:  KAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI
        K E++ N GE ++ A           TVVIEHC   + + + A  +   L    P + V +NP KPRRG FE+
Subjt:  KAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI

Arabidopsis top hits

e value

%identity

Alignment

AT2G24440.1 selenium binding

1.6e-30

49.43

Show/hide

Query:  MAPKKRTKTQEGEPAA-AKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKR--APKENGKAEEVG-----NEGEEVDAASEKLGEDSKGRTV
        MA KK     +G+  A  +   +  R TRS  +   +S   +  E P  +  K+ KAK   A K+  K EEV       E E+ DAA ++  +DS  + +
Subjt:  MAPKKRTKTQEGEPAA-AKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKR--APKENGKAEEVG-----NEGEEVDAASEKLGEDSKGRTV

Query:  VIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEEL
        VIEHCKQC+SFK+RA +V+ GLE  VPGI V +NPDKPRRGCFEIR E GE FISLL MKRPFT MKEL+MEE+
Subjt:  VIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEEL

AT4G31360.1 selenium binding

1.1e-29

48.07

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Query:  PKKRTKTQEGEPAAAKPAPASSRVTRS-SARLAANSKTDLPAEEPVAELPKSKKAKR--------APKENGKAEEVGNEGEEVDAASEKLG---EDSKGR
        P K++K    E A      ASSRVTRS  +R  + ++ +       A  P +KKAKR          K+  K EEV    E V+   EK     ED    
Subjt:  PKKRTKTQEGEPAAAKPAPASSRVTRS-SARLAANSKTDLPAEEPVAELPKSKKAKR--------APKENGKAEEVGNEGEEVDAASEKLG---EDSKGR

Query:  TVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI
         +VIEHCKQC +FK RAIQV+  LE  VPG+TV LNP+KPRRGCFEIR E G+ FISLL+MKRPF  MK LDMEE+    I
Subjt:  TVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSI

Sequences

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CDS sequence

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ATGGCGCCCAAGAAGCGAACCAAGACCCAAGAAGGCGAGCCGGCGGCGGCCAAGCCGGCTCCGGCGTCGTCGAGGGTCACTCGGAGCTCGGCCCGGCTGGCGGCGAACTC
CAAGACCGATTTGCCGGCGGAGGAGCCTGTGGCGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGCGGAGGAGGTTGGAAATGAGGGGG
AGGAAGTCGATGCTGCTTCGGAGAAGCTTGGCGAGGATTCCAAGGGCAGAACGGTTGTGATTGAACATTGCAAGCAGTGCCAATCGTTCAAGAAAAGGGCCATCCAAGTG
CAAACTGGTCTAGAGAATGGTGTTCCTGGTATCACTGTGCTACTCAATCCTGATAAGCCAAGAAGGGGATGCTTTGAAATTCGGGGTGAAGATGGCGAGAAGTTTATCAG
TCTACTGGACATGAAGCGACCGTTTACTCGTATGAAGGAACTGGACATGGAGGAACTAACCAACCAGAGTATCTTTGATGGTGGAGACTTAGCAAATGATCATTGCCAAT
GCCAATGTTGTGGCCTCATGGTGTTGGTATTTGATTGCAAAGGTAAAGCCATCAGGGGTACACATTGGTTTGGTTTTTCAATTTTAGGCAAAATTGAGAATCGAGCTGAT
GATACGCTTGGGTTTCACAAATGA

mRNA sequence

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Protein sequence

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MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQV
QTGLENGVPGITVLLNPDKPRRGCFEIRGEDGEKFISLLDMKRPFTRMKELDMEELTNQSIFDGGDLANDHCQCQCCGLMVLVFDCKGKAIRGTHWFGFSILGKIENRAD
DTLGFHK

Lag0005171 (gene) of Sponge gourd (AG-4) v1 genome