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Lag0005175 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005175
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationchr6:11609494..11609850
RNA-Seq ExpressionLag0005175
SyntenyLag0005175
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.3e-0851.61Show/hide
Query:  RKNPGTYTTTNL--RRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        R NPGTYT        W      + +  I AW YC PVISVDG  +K+K+ GTLISACT+DG
Subjt:  RKNPGTYTTTNL--RRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

KAA0066503.1 uncharacterized protein E6C27_scaffold25G00500 [Cucumis melo var. makuwa]1.4e-0848.61Show/hide
Query:  LSHIFCCIDRKNPGTYTTTNLR---RWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        LS     + R NPGTYT        R+K  ++ + +  I AW YC PVISVDG  +K+K+ GTLISACT+DG
Subjt:  LSHIFCCIDRKNPGTYTTTNLR---RWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

KAA0067291.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]5.3e-0854.84Show/hide
Query:  RKNPGTYTT-TNLRRWKVQILFM-YSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        R NPGTYTT       + +  FM  +  I AW YC PVISVDG  +K K+ GTLISACT+DG
Subjt:  RKNPGTYTT-TNLRRWKVQILFM-YSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

TYK10904.1 uncharacterized protein E5676_scaffold231G00820 [Cucumis melo var. makuwa]5.3e-0854.84Show/hide
Query:  RKNPGTYTT-TNLRRWKVQILFM-YSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        R NPGTYTT       + +  FM  +  I AW YC PVISVDG  +K K+ GTLISACT+DG
Subjt:  RKNPGTYTT-TNLRRWKVQILFM-YSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

TYK27228.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]9.0e-0846.48Show/hide
Query:  LSHIFCCIDRKNPGTYTT--TNLRRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        LS     + R NPG YT   TN   W        +  I AW YC P+I VDG  +K+K+ GTLISACT+DG
Subjt:  LSHIFCCIDRKNPGTYTT--TNLRRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

TrEMBL top hitse value%identityAlignment
A0A5A7VAU3 MuDRA-like transposase2.6e-0851.61Show/hide
Query:  RKNPGTYTTTNL--RRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        R NPGTYT        W      + +  I AW YC PVISVDG  +K+K+ GTLISACT+DG
Subjt:  RKNPGTYTTTNL--RRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

A0A5A7VEN5 Uncharacterized protein6.7e-0948.61Show/hide
Query:  LSHIFCCIDRKNPGTYTTTNLR---RWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        LS     + R NPGTYT        R+K  ++ + +  I AW YC PVISVDG  +K+K+ GTLISACT+DG
Subjt:  LSHIFCCIDRKNPGTYTTTNLR---RWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

A0A5A7VNV1 Protein FAR1-RELATED SEQUENCE 2-like2.6e-0854.84Show/hide
Query:  RKNPGTYTT-TNLRRWKVQILFM-YSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        R NPGTYTT       + +  FM  +  I AW YC PVISVDG  +K K+ GTLISACT+DG
Subjt:  RKNPGTYTT-TNLRRWKVQILFM-YSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

A0A5D3CIA4 Uncharacterized protein2.6e-0854.84Show/hide
Query:  RKNPGTYTT-TNLRRWKVQILFM-YSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        R NPGTYTT       + +  FM  +  I AW YC PVISVDG  +K K+ GTLISACT+DG
Subjt:  RKNPGTYTT-TNLRRWKVQILFM-YSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

A0A5D3DUQ2 Protein FAR1-RELATED SEQUENCE 4-like4.4e-0846.48Show/hide
Query:  LSHIFCCIDRKNPGTYTT--TNLRRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG
        LS     + R NPG YT   TN   W        +  I AW YC P+I VDG  +K+K+ GTLISACT+DG
Subjt:  LSHIFCCIDRKNPGTYTT--TNLRRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTATCCCACATTTTCTGCTGCATTGATCGAAAGAACCCAGGAACATATACAACTACGAACTTGAGACGATGGAAGGTTCAAATACTTTTTATGTACTCTCTGCC
CATTCATGCGTGGAAATATTGTTTTCCTGTCATATCAGTTGATGGTACGTTCTTAAAGAGCAAATTTGCTGGCACTCTAATTTCTGCTTGTACATTGGATGGAATTCTCA
ATTGTTCCGTTGGCATTTTCTACAGTAGATTCAGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTATCCCACATTTTCTGCTGCATTGATCGAAAGAACCCAGGAACATATACAACTACGAACTTGAGACGATGGAAGGTTCAAATACTTTTTATGTACTCTCTGCC
CATTCATGCGTGGAAATATTGTTTTCCTGTCATATCAGTTGATGGTACGTTCTTAAAGAGCAAATTTGCTGGCACTCTAATTTCTGCTTGTACATTGGATGGAATTCTCA
ATTGTTCCGTTGGCATTTTCTACAGTAGATTCAGAAAATGA
Protein sequenceShow/hide protein sequence
MPLSHIFCCIDRKNPGTYTTTNLRRWKVQILFMYSLPIHAWKYCFPVISVDGTFLKSKFAGTLISACTLDGILNCSVGIFYSRFRK