; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005185 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005185
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr6:11717202..11718229
RNA-Seq ExpressionLag0005185
SyntenyLag0005185
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_032235109.1 uncharacterized protein LOC5510132 [Nematostella vectensis]2.9e-0425.21Show/hide
Query:  SQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANRPIIQEDQQANRPIIQEDQQANRPIIQEDQQANKPI--------QQI
        SQ    +D+Q ++PI   ++          SQP    D+QVS+PI  +D+Q ++PI   D+Q ++PI   D+Q ++P+   D+Q ++PI        Q I
Subjt:  SQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANRPIIQEDQQANRPIIQEDQQANRPIIQEDQQANKPI--------QQI

Query:  IKPTGRSRRSTSRSSKRINKLTSRSNRSSSQQADPTDHQVNRLIIQEDQQANRPIKKINKSASRS----SKKINKPTDRTDHQANRPI----QEIIKSAG
          P  +   S +   + +++L +  ++  SQ     D QV++ I   D+Q ++PI  +++  S+      +++++P    + Q ++PI    +++  S  
Subjt:  IKPTGRSRRSTSRSSKRINKLTSRSNRSSSQQADPTDHQVNRLIIQEDQQANRPIKKINKSASRS----SKKINKPTDRTDHQANRPI----QEIIKSAG

Query:  RSSKRINKLTSRSNRSSSQQADPRDHQVNRPIIQEDQQANKP
           + +++L +  ++ +SQ     D QV++P    D+Q ++P
Subjt:  RSSKRINKLTSRSNRSSSQQADPRDHQVNRPIIQEDQQANKP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAGAGTCCAGAGTCGGCAGACCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATC
CAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGTCGATCATCCAAGAGATCAACAAGCCAAC
CGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAA
GAAGATCAACAAGCCAACAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCAAGAAGATCAACAAGCCGATC
ATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAAGCCGATCCAACAGATCATCAAGTTAACAGACTGATCATCCAAGAAGATCAACAAG
CCAACCGACCGATCAAGAAGATCAACAAGTCAGCAAGCCGATCATCCAAGAAGATCAACAAGCCAACTGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATC
ATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAACAGGCCGAT
CATCCAAGAGGATCAACAAGCTAACAAGCCGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAGAGTCCAGAGTCGGCAGACCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATC
CAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGTCGATCATCCAAGAGATCAACAAGCCAAC
CGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAA
GAAGATCAACAAGCCAACAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCAAGAAGATCAACAAGCCGATC
ATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAAGCCGATCCAACAGATCATCAAGTTAACAGACTGATCATCCAAGAAGATCAACAAG
CCAACCGACCGATCAAGAAGATCAACAAGTCAGCAAGCCGATCATCCAAGAAGATCAACAAGCCAACTGATCGAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATC
ATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTCAACAGGCCGAT
CATCCAAGAGGATCAACAAGCTAACAAGCCGATCTAA
Protein sequenceShow/hide protein sequence
MPHLETESENSESRAFCQSPESADRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKINKSAGRSSKRSTSQPTDQEDQQVSRPIIQEDQQANRPIIQEDQQANRPIIQ
EDQQANRPIIQEDQQANKPIQQIIKPTGRSRRSTSRSSKRINKLTSRSNRSSSQQADPTDHQVNRLIIQEDQQANRPIKKINKSASRSSKKINKPTDRTDHQANRPIQEI
IKSAGRSSKRINKLTSRSNRSSSQQADPRDHQVNRPIIQEDQQANKPI