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Lag0005226 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005226
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:12286420..12286881
RNA-Seq ExpressionLag0005226
SyntenyLag0005226
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]4.8e-2042.86Show/hide
Query:  MEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPSEVAFDTALQEISCKVSK
        +E+++   L  EE+YWKQRSR +WLK GDKNTK+FH  AS R+ +N I G+ +D G W+ D + ++  F  +FQ +FTS +PS+     AL+ +  KVS+
Subjt:  MEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPSEVAFDTALQEISCKVSK

Query:  EMDDKLLASFDRAEVIRAV
        EM+  L   F   ++ RA+
Subjt:  EMDDKLLASFDRAEVIRAV

XP_015380705.1 uncharacterized protein LOC107174377 [Citrus sinensis]6.3e-2039.31Show/hide
Query:  INKVKAMLQDL-YSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQ
        ++K+ A L++L +SG+   +   I  ++  +   L  EEIYWKQRS  +WLK  DKNTK+FH  AS RK +N I GI +    WI   +++++   AYF 
Subjt:  INKVKAMLQDL-YSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQ

Query:  NMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAV
        N+F++  P +   D AL+EI+ +V+KEM+D+L   F   E++ A+
Subjt:  NMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAV

XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]1.8e-1940.98Show/hide
Query:  ITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPSEVAFDTALQEISCK
        + ++E ++D  L  EEIYW+QRSR  WL+ GDKNTK+FH  AS RK +N I GI +++  W   ++ +++ F  Y+ N+FTS +PS+   + AL+ +  K
Subjt:  ITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPSEVAFDTALQEISCK

Query:  VSKEMDDKLLASFDRAEVIRAV
        VS EM+  L   F  A+++ A+
Subjt:  VSKEMDDKLLASFDRAEVIRAV

XP_022158772.1 uncharacterized protein LOC111025237 [Momordica charantia]2.7e-2343.8Show/hide
Query:  QDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPS
        + L S  PL DF +I  +E  L   LE EEI+WKQRSR++WLKWGD N KWFHK A+MRKS N I GI +  G W  + +++   F+ YFQ++FTS  P 
Subjt:  QDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPS

Query:  EVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK
         +  D+    I  +++ E++ +LLA +   E+  A+K
Subjt:  EVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK

XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber]1.3e-2040.82Show/hide
Query:  GDINKVKAMLQDLYSGQPLWDFRL-----ITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQT
        G++NK+    QD      + D  L     I  +++ +++ L  EEI WKQRSR  WL+ GD+NTK+FH +AS R+ +N I G+ ND G W+ D + +D+ 
Subjt:  GDINKVKAMLQDLYSGQPLWDFRL-----ITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQT

Query:  FVAYFQNMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEV
         + YF  +F S +PS  +FD +L  IS +VS+EM+  LLA F   EV
Subjt:  FVAYFQNMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEV

TrEMBL top hitse value%identityAlignment
A0A2N9H577 Reverse transcriptase domain-containing protein7.2e-2244.2Show/hide
Query:  LQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDP
        LQ L S  PL D   I  ++E L+  LE EEI+WKQRS  +W+   DKNTK+FH   S  +  N I G+ +DSG W +D  ++ +  V YFQN+F+S +P
Subjt:  LQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDP

Query:  SEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK
        +E    T L  +   VS EM+D LLA F   EV+ A+K
Subjt:  SEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK

A0A6J1DY29 uncharacterized protein LOC1110252371.3e-2343.8Show/hide
Query:  QDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPS
        + L S  PL DF +I  +E  L   LE EEI+WKQRSR++WLKWGD N KWFHK A+MRKS N I GI +  G W  + +++   F+ YFQ++FTS  P 
Subjt:  QDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPS

Query:  EVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK
         +  D+    I  +++ E++ +LLA +   E+  A+K
Subjt:  EVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK

A0A803P3X4 Uncharacterized protein1.4e-2036.91Show/hide
Query:  IRGDINKVKAMLQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVA
        +  +I K K +L +L   Q    + +I  ME++L+  LE +E Y +QRSR  WLKWGD+NTK+FH  AS R+ +N I+G+ +  G W  D   + +    
Subjt:  IRGDINKVKAMLQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVA

Query:  YFQNMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK
        Y+  +FTS + +E  F+  L+ +  KV+ +M+D L+ +    +V+RAVK
Subjt:  YFQNMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK

A0A803PV25 Uncharacterized protein3.2e-2239.74Show/hide
Query:  AKIRGDINKVKAMLQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTF
        +K+  ++ K+K  L +L   Q    +  I  ME +L+  LE +E YW+QRSR  WL+WGD+NTK+FH  AS R+ +N I+G+ +  G W  D   + +  
Subjt:  AKIRGDINKVKAMLQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTF

Query:  VAYFQNMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK
          Y++ +FTS D +E   +  L  +  KVS  M++ LLA F   EVIRAVK
Subjt:  VAYFQNMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK

A0A803PWX1 Uncharacterized protein1.8e-2036.42Show/hide
Query:  AKIRGDINKVKAMLQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTF
        A++  +I K K +L +L   Q    +  I  ME++L+  LE +E YW+QRSR  WL+WGD+NTK+FH  AS R+ +N I+G+ +  G W  D   + Q  
Subjt:  AKIRGDINKVKAMLQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTF

Query:  VAYFQNMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK
          Y++ +F   D  +      L+ +  KVS  M+++L+  F   EV++AVK
Subjt:  VAYFQNMFTSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.9e-0628Show/hide
Query:  FRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPSEVAFDTALQEI
        FR+  +  ++ +    A E +++Q+SR  WL+ GD NT++FHK     +++NLI+ +  D    + +  Q+ +  VAY+ ++  S   S++    ++Q I
Subjt:  FRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMFTSIDPSEVAFDTALQEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCAAAAATTCGGGGTGACATAAATAAAGTTAAAGCCATGTTGCAAGATTTGTACAGTGGGCAACCCCTATGGGATTTTAGATTAATTACAATCATGGAGGAACG
ACTTGACAAAGCGTTGGAAGCAGAGGAAATTTATTGGAAACAACGATCTAGAGACAACTGGTTAAAATGGGGGGACAAAAATACTAAATGGTTCCATAAGAGCGCCTCCA
TGAGGAAAAGCCGTAATCTAATACAAGGAATCACGAATGATAGTGGGACATGGATTACAGATAGCCAACAACTGGATCAAACTTTCGTTGCTTACTTCCAAAACATGTTC
ACATCCATCGATCCAAGCGAAGTAGCGTTCGATACTGCTTTACAGGAGATAAGTTGTAAGGTGTCCAAGGAAATGGATGATAAATTACTAGCTTCGTTTGATCGAGCAGA
AGTGATTCGCGCTGTGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCAAAAATTCGGGGTGACATAAATAAAGTTAAAGCCATGTTGCAAGATTTGTACAGTGGGCAACCCCTATGGGATTTTAGATTAATTACAATCATGGAGGAACG
ACTTGACAAAGCGTTGGAAGCAGAGGAAATTTATTGGAAACAACGATCTAGAGACAACTGGTTAAAATGGGGGGACAAAAATACTAAATGGTTCCATAAGAGCGCCTCCA
TGAGGAAAAGCCGTAATCTAATACAAGGAATCACGAATGATAGTGGGACATGGATTACAGATAGCCAACAACTGGATCAAACTTTCGTTGCTTACTTCCAAAACATGTTC
ACATCCATCGATCCAAGCGAAGTAGCGTTCGATACTGCTTTACAGGAGATAAGTTGTAAGGTGTCCAAGGAAATGGATGATAAATTACTAGCTTCGTTTGATCGAGCAGA
AGTGATTCGCGCTGTGAAATAA
Protein sequenceShow/hide protein sequence
MLAKIRGDINKVKAMLQDLYSGQPLWDFRLITIMEERLDKALEAEEIYWKQRSRDNWLKWGDKNTKWFHKSASMRKSRNLIQGITNDSGTWITDSQQLDQTFVAYFQNMF
TSIDPSEVAFDTALQEISCKVSKEMDDKLLASFDRAEVIRAVK