; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005232 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005232
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr6:12459949..12460668
RNA-Seq ExpressionLag0005232
SyntenyLag0005232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645659.1 hypothetical protein Csa_020439 [Cucumis sativus]2.0e-4551.46Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI  YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTF
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST
        RTSMRTR QPV+FEELH L R                NQ                  N N   G G  GKN +G G+  F +           G G S  
Subjt:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST

Query:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
        + P +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Subjt:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

KAG6588985.1 Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4550.63Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MTVINATLS   LA +VG  TS+QVW  L K YSS++R+NVV LKSDLQ+I+KK  ESI  YI+RI E+KDKLA+VS V+++EDL+IY LNGL  EYNTF
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELHNL--------------------------------SRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST
        RTSMRTR  PV+FEELH L                                S     N N   GRG     GHG G S F +  GR       G GSS  
Subjt:  RTSMRTRVQPVSFEELHNL--------------------------------SRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST

Query:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
        +   +++N   CQIC + GH ALD FNRMNY+F GRHPP
Subjt:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

KAG7015254.1 hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4550.63Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MTVINATLS   LA +VG  TS+QVW  L K YSS++R+NVV LKSDLQ+I+KK  ESI  YI+RI E+KDKLA+VS V+++EDL+IY LNGL  EYNTF
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELHNL--------------------------------SRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST
        RTSMRTR  PV+FEELH L                                S     N N   GRG     GHG G S F +  GR       G GSS  
Subjt:  RTSMRTRVQPVSFEELHNL--------------------------------SRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST

Query:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
        +   +++N   CQIC + GH ALD FNRMNY+F GRHPP
Subjt:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

XP_011658579.1 uncharacterized protein LOC105436058 [Cucumis sativus]2.0e-4551.46Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI  YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTF
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST
        RTSMRTR QPV+FEELH L R                NQ                  N N   G G  GKN +G G+  F +           G G S  
Subjt:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST

Query:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
        + P +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Subjt:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

XP_022150845.1 uncharacterized protein LOC111018892 [Momordica charantia]9.0e-4651.24Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MT+INATLS+  LA +V   TS+QVWE L KHYSSN+RTNVV LKSDLQSI KK  ESI  Y++RI E+KDK A+VSI I++E L+IY LNGLS EYNT 
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELH--------------------------------NLSRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNF---GRGCGFCPLGSGS
         TSMRTR Q VSFEELH                                + +R    +PN  H RG  GKN +GRGK+ F   F   GR       G  S
Subjt:  RTSMRTRVQPVSFEELH--------------------------------NLSRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNF---GRGCGFCPLGSGS

Query:  SSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
         +  T   + N   CQIC K GHTALD +NRMN+ FQGRHPP
Subjt:  SSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X24.8e-4550.63Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI  YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTF
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST
        RTSMRTR QPV+FEELH L R                NQ                  + N   G G     GHGR      +   RG G        SS 
Subjt:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST

Query:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
        +   +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Subjt:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X34.8e-4550.63Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI  YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTF
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST
        RTSMRTR QPV+FEELH L R                NQ                  + N   G G     GHGR      +   RG G        SS 
Subjt:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST

Query:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
        +   +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Subjt:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X14.8e-4550.63Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI  YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTF
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST
        RTSMRTR QPV+FEELH L R                NQ                  + N   G G     GHGR      +   RG G        SS 
Subjt:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST

Query:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
        +   +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Subjt:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

A0A5D3CLI6 T4.54.8e-4550.63Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MTVINATLS   LA +VG  +S+QVW+ L K YSS +R+NVV LKSDLQ+I KKP ESI  YI+RI E+KDKLA+VS  I+ EDL+IY LNGL  EYNTF
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST
        RTSMRTR QPV+FEELH L R                NQ                  + N   G G     GHGR      +   RG G        SS 
Subjt:  RTSMRTRVQPVSFEELHNLSR----------------NQ----------------NVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSST

Query:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
        +   +  N   CQIC + GHTALD FNRMNY+FQGRHPP
Subjt:  KTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

A0A6J1D9L6 uncharacterized protein LOC1110188924.4e-4651.24Show/hide
Query:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF
        MT+INATLS+  LA +V   TS+QVWE L KHYSSN+RTNVV LKSDLQSI KK  ESI  Y++RI E+KDK A+VSI I++E L+IY LNGLS EYNT 
Subjt:  MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTF

Query:  RTSMRTRVQPVSFEELH--------------------------------NLSRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNF---GRGCGFCPLGSGS
         TSMRTR Q VSFEELH                                + +R    +PN  H RG  GKN +GRGK+ F   F   GR       G  S
Subjt:  RTSMRTRVQPVSFEELH--------------------------------NLSRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNF---GRGCGFCPLGSGS

Query:  SSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP
         +  T   + N   CQIC K GHTALD +NRMN+ FQGRHPP
Subjt:  SSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTGATCAACGCCACTCTCTCTTCTACAACCCTAGCATGCATTGTAGGCTGTGAAACGTCTCAGCAAGTGTGGGAGACTTTGGTGAAGCATTATTCTTCAAATAC
TCGTACGAATGTCGTCAAACTCAAGTCTGATCTACAATCCATCGCTAAGAAGCCTTCCGAATCTATTGCTCAGTATATTCAGAGAATCAATGAACTCAAAGATAAGTTGG
CTAGTGTTTCTATCGTTATTGATAATGAAGATCTAATCATTTATACTTTGAATGGCCTCTCTGCTGAGTATAATACTTTTCGCACTTCAATGCGAACTCGTGTTCAACCA
GTTTCTTTTGAAGAACTTCATAATCTTAGTCGCAATCAGAATGTTAACCCTAACATTGGTCATGGTCGTGGAATTCCTGGTAAGAATGGCCATGGTCGAGGTAAGTCTCC
TTTTCCTAGTAATTTTGGTCGTGGTTGTGGTTTCTGTCCCCTTGGGTCTGGATCTTCTTCTACTAAAACTCCGGATATTTCATCTAATAGTCTGGTGTGTCAGATTTGCC
AAAAGCCTGGCCATACTGCTCTTGACTATTTCAACAGGATGAATTATAGCTTTCAAGGTCGTCATCCTCCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGTGATCAACGCCACTCTCTCTTCTACAACCCTAGCATGCATTGTAGGCTGTGAAACGTCTCAGCAAGTGTGGGAGACTTTGGTGAAGCATTATTCTTCAAATAC
TCGTACGAATGTCGTCAAACTCAAGTCTGATCTACAATCCATCGCTAAGAAGCCTTCCGAATCTATTGCTCAGTATATTCAGAGAATCAATGAACTCAAAGATAAGTTGG
CTAGTGTTTCTATCGTTATTGATAATGAAGATCTAATCATTTATACTTTGAATGGCCTCTCTGCTGAGTATAATACTTTTCGCACTTCAATGCGAACTCGTGTTCAACCA
GTTTCTTTTGAAGAACTTCATAATCTTAGTCGCAATCAGAATGTTAACCCTAACATTGGTCATGGTCGTGGAATTCCTGGTAAGAATGGCCATGGTCGAGGTAAGTCTCC
TTTTCCTAGTAATTTTGGTCGTGGTTGTGGTTTCTGTCCCCTTGGGTCTGGATCTTCTTCTACTAAAACTCCGGATATTTCATCTAATAGTCTGGTGTGTCAGATTTGCC
AAAAGCCTGGCCATACTGCTCTTGACTATTTCAACAGGATGAATTATAGCTTTCAAGGTCGTCATCCTCCTGCTTAG
Protein sequenceShow/hide protein sequence
MTVINATLSSTTLACIVGCETSQQVWETLVKHYSSNTRTNVVKLKSDLQSIAKKPSESIAQYIQRINELKDKLASVSIVIDNEDLIIYTLNGLSAEYNTFRTSMRTRVQP
VSFEELHNLSRNQNVNPNIGHGRGIPGKNGHGRGKSPFPSNFGRGCGFCPLGSGSSSTKTPDISSNSLVCQICQKPGHTALDYFNRMNYSFQGRHPPA