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Lag0005245 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005245
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr6:12644120..12647403
RNA-Seq ExpressionLag0005245
SyntenyLag0005245
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN78912.1 hypothetical protein VITISV_004522 [Vitis vinifera]9.6e-1573.58Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWVDQV
        +LWMKRFI ELGFKQQ YV++CDNQS IHL KNSTFH+R+KHIDVR  W+  V
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWVDQV
KAA0041611.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.7e-1663.89Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV-----DQVDFGRRRGSDGSGFD
        MLWMKRFIQELGFKQQ YVI+C+NQSAIHLGKN+TFHS+TKHIDV+  W+     D++    +  +D +GFD
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV-----DQVDFGRRRGSDGSGFD
KAA0047571.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-1686Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
        MLWMK FIQELGFKQQ YVI+CDNQSAIHLGKN+TFHSRTKHIDVR  W+
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
RVW43825.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]5.6e-1578Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
        +LWMKRFI ELGFKQQ YV++CDNQSAIHL KNSTFH+R+KHIDVR  W+
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
TYK14965.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-1686Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
        MLWMK FIQELGFKQQ YVI+CDNQSAIHLGKN+TFHSRTKHIDVR  W+
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
TrEMBL top hitse value%identityAlignment
A0A438E7R3 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-1578Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
        +LWMKRFI ELGFKQQ YV++CDNQSAIHL KNSTFH+R+KHIDVR  W+
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
A0A5A7TIZ8 Retrovirus-related Pol polyprotein from transposon TNT 1-943.2e-1663.89Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV-----DQVDFGRRRGSDGSGFD
        MLWMKRFIQELGFKQQ YVI+C+NQSAIHLGKN+TFHS+TKHIDV+  W+     D++    +  +D +GFD
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV-----DQVDFGRRRGSDGSGFD
A0A5A7U1W5 Retrovirus-related Pol polyprotein from transposon TNT 1-948.5e-1786Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
        MLWMK FIQELGFKQQ YVI+CDNQSAIHLGKN+TFHSRTKHIDVR  W+
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
A0A5D3CTW0 Retrovirus-related Pol polyprotein from transposon TNT 1-948.5e-1786Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
        MLWMK FIQELGFKQQ YVI+CDNQSAIHLGKN+TFHSRTKHIDVR  W+
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWV
A5BEP3 Integrase catalytic domain-containing protein4.6e-1573.58Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWVDQV
        +LWMKRFI ELGFKQQ YV++CDNQS IHL KNSTFH+R+KHIDVR  W+  V
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWVDQV
SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.8e-1460.38Show/hide
Query:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWVDQV
        M+W+KRF+QELG  Q+ YV++CD+QSAI L KNS +H+RTKHIDVR  W+ ++
Subjt:  MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWVDQV
Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.7e-0644.44Show/hide
Query:  MLWMKRFIQELGFK-QQWYVIFCDNQSAIHLGKNSTFHSRTKHID
        M+W+ +F +EL     +  ++FCDN +AIH+  N+ FH RTKHI+
Subjt:  MLWMKRFIQELGFK-QQWYVIFCDNQSAIHLGKNSTFHSRTKHID

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTGGATGAAGCGATTTATACAGGAGCTTGGCTTTAAGCAGCAATGGTATGTGATATTTTGCGATAACCAGAGTGCTATTCATCTTGGTAAGAACTCTACA
TTTCATTCAAGAACTAAACATATAGATGTGAGATTGGGGTGGGTCGATCAAGTTGATTTCGGGAGAAGACGAGGATCTGATGGAAGTGGGTTTGATCGCGGAATC
GATCGTCAATCTGGCAAGGAACGCATCGATTTCTTTCTCACGATAGGCAGGTTGTCAGTGGCGCCTAGTCGGCGAAGGTCGGTTAGTCGAAGGTCGACGATGGCG
ATCGGTAGACGAAAGTCGAAGATGGCGGTCGGTCGATGGCGGCCGGTCAGTGGAGGTCGGTGGCGGCTGATTAGCAGAGGTTGGCGGCATCTAATAGTCGGAGGT
CGACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTGGATGAAGCGATTTATACAGGAGCTTGGCTTTAAGCAGCAATGGTATGTGATATTTTGCGATAACCAGAGTGCTATTCATCTTGGTAAGAACTCTACA
TTTCATTCAAGAACTAAACATATAGATGTGAGATTGGGGTGGGTCGATCAAGTTGATTTCGGGAGAAGACGAGGATCTGATGGAAGTGGGTTTGATCGCGGAATC
GATCGTCAATCTGGCAAGGAACGCATCGATTTCTTTCTCACGATAGGCAGGTTGTCAGTGGCGCCTAGTCGGCGAAGGTCGGTTAGTCGAAGGTCGACGATGGCG
ATCGGTAGACGAAAGTCGAAGATGGCGGTCGGTCGATGGCGGCCGGTCAGTGGAGGTCGGTGGCGGCTGATTAGCAGAGGTTGGCGGCATCTAATAGTCGGAGGT
CGACGGTGA
Protein sequenceShow/hide protein sequence
MLWMKRFIQELGFKQQWYVIFCDNQSAIHLGKNSTFHSRTKHIDVRLGWVDQVDFGRRRGSDGSGFDRGIDRQSGKERIDFFLTIGRLSVAPSRRRSVSRRSTMA
IGRRKSKMAVGRWRPVSGGRWRLISRGWRHLIVGGRR