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Lag0005251 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005251
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:12679984..12680442
RNA-Seq ExpressionLag0005251
SyntenyLag0005251
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG57706.1 hypothetical protein EZV62_015535 [Acer yangbiense]8.1e-2033.12Show/hide
Query:  EKGLQNMVVC---KILTSKGIVPEVFMRLMPKIWGMEGKMKM-KVGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFH
        ++G Q + +C   K+L +K +   VF+ +M KIW +EG +++ +V  NI+   F++ +++ R+++G LW +D+A+++FE P G  E++ + F    FW  
Subjt:  EKGLQNMVVC---KILTSKGIVPEVFMRLMPKIWGMEGKMKM-KVGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFH

Query:  FHNLPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKER
         HNLP +C  K+    LGN I V K++D +    G G  LR++  +  N+P ++
Subjt:  FHNLPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKER

TXG62563.1 hypothetical protein EZV62_009557 [Acer yangbiense]3.1e-1932.26Show/hide
Query:  EKGLQNMVVC---KILTSKGIVPEVFMRLMPKIWGMEGKMKMKVGK-NIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFH
        +KG Q + +C   K+LTSK +  E F  +M +IW + G ++++  K NI+ C F +   + R++ G  W +D+A+++FEEP G  +I ++ F  + FW  
Subjt:  EKGLQNMVVC---KILTSKGIVPEVFMRLMPKIWGMEGKMKMKVGK-NIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFH

Query:  FHNLPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN
         HNL  +C +++  + LGN I   + +DL+  + G G  +R++  I +++P  R+
Subjt:  FHNLPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN

TXG64850.1 hypothetical protein EZV62_011844 [Acer yangbiense]9.0e-1933.55Show/hide
Query:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN
        +K L   +V K+LTS+ +  EVF+ +M KIW + G + ++ +  NI+   F +  ++ RV+ G  W +D+A+++F+EP G  +I +L F Y  FW   HN
Subjt:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN

Query:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN
        LP +C N++  +TLG+ I   +  D        G  +R++  I ++KP +R+
Subjt:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN

TXG73522.1 hypothetical protein EZV62_002101 [Acer yangbiense]2.6e-1832.89Show/hide
Query:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN
        E+ L   +V K+L SK +  E F  +M ++W + G ++++ +  N++  +F++   + RV+ G  W +DKALL+ EEP G +EI ++EF  + FW   HN
Subjt:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN

Query:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN
        LP +C +++  + LGN I   + VDL+  + G    +R++  I +++P +R+
Subjt:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.0e-1837.09Show/hide
Query:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN
        E+GL   +V K+L  + I  +V  R++   W +E ++ ++ +GKN++   F  + + NRV++   W +DKAL++ ++P  +  I  LEF    FW H  +
Subjt:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN

Query:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKER
        LP    NK  A+ LGNAI  F  VD +E+   WG +LRI+  IDI KP  R
Subjt:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKER

TrEMBL top hitse value%identityAlignment
A0A5C7HN25 Uncharacterized protein3.9e-2033.12Show/hide
Query:  EKGLQNMVVC---KILTSKGIVPEVFMRLMPKIWGMEGKMKM-KVGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFH
        ++G Q + +C   K+L +K +   VF+ +M KIW +EG +++ +V  NI+   F++ +++ R+++G LW +D+A+++FE P G  E++ + F    FW  
Subjt:  EKGLQNMVVC---KILTSKGIVPEVFMRLMPKIWGMEGKMKM-KVGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFH

Query:  FHNLPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKER
         HNLP +C  K+    LGN I V K++D +    G G  LR++  +  N+P ++
Subjt:  FHNLPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKER

A0A5C7HZD3 CCHC-type domain-containing protein1.5e-1932.26Show/hide
Query:  EKGLQNMVVC---KILTSKGIVPEVFMRLMPKIWGMEGKMKMKVGK-NIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFH
        +KG Q + +C   K+LTSK +  E F  +M +IW + G ++++  K NI+ C F +   + R++ G  W +D+A+++FEEP G  +I ++ F  + FW  
Subjt:  EKGLQNMVVC---KILTSKGIVPEVFMRLMPKIWGMEGKMKMKVGK-NIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFH

Query:  FHNLPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN
         HNL  +C +++  + LGN I   + +DL+  + G G  +R++  I +++P  R+
Subjt:  FHNLPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN

A0A5C7I6E5 CCHC-type domain-containing protein4.4e-1933.55Show/hide
Query:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN
        +K L   +V K+LTS+ +  EVF+ +M KIW + G + ++ +  NI+   F +  ++ RV+ G  W +D+A+++F+EP G  +I +L F Y  FW   HN
Subjt:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN

Query:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN
        LP +C N++  +TLG+ I   +  D        G  +R++  I ++KP +R+
Subjt:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN

A0A5C7IY45 CCHC-type domain-containing protein1.3e-1832.89Show/hide
Query:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN
        E+ L   +V K+L SK +  E F  +M ++W + G ++++ +  N++  +F++   + RV+ G  W +DKALL+ EEP G +EI ++EF  + FW   HN
Subjt:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN

Query:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN
        LP +C +++  + LGN I   + VDL+  + G    +R++  I +++P +R+
Subjt:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN

A0A6J1DU55 uncharacterized protein LOC1110231359.7e-1937.09Show/hide
Query:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN
        E+GL   +V K+L  + I  +V  R++   W +E ++ ++ +GKN++   F  + + NRV++   W +DKAL++ ++P  +  I  LEF    FW H  +
Subjt:  EKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMK-VGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHN

Query:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKER
        LP    NK  A+ LGNAI  F  VD +E+   WG +LRI+  IDI KP  R
Subjt:  LPPVCFNKKNAMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGGCCTCCAGAACATGGTGGTTTGCAAAATCCTCACATCGAAAGGAATAGTGCCGGAAGTATTTATGAGACTAATGCCCAAAATATGGGGTATGGAAGGAAA
AATGAAGATGAAGGTAGGTAAAAACATATACACCTGCAAGTTCAGAAGCAAAAGGGAGAAGAACCGAGTAGTGGAAGGCAGACTATGGATCTATGACAAAGCACTACTCC
TTTTTGAAGAGCCCAGAGGAAATAACGAGATAAAATCCTTGGAATTCAAGTACTCGCACTTTTGGTTTCACTTCCACAACTTACCCCCTGTGTGTTTCAACAAGAAAAAC
GCCATGACGTTGGGAAATGCGATAGAAGTCTTCAAAAAGGTGGACCTGGATGAAGAGGAGAAAGGGTGGGGAGATACACTAAGAATAAAAACAAGAATAGACATAAATAA
GCCGAAAGAGAGGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGGCCTCCAGAACATGGTGGTTTGCAAAATCCTCACATCGAAAGGAATAGTGCCGGAAGTATTTATGAGACTAATGCCCAAAATATGGGGTATGGAAGGAAA
AATGAAGATGAAGGTAGGTAAAAACATATACACCTGCAAGTTCAGAAGCAAAAGGGAGAAGAACCGAGTAGTGGAAGGCAGACTATGGATCTATGACAAAGCACTACTCC
TTTTTGAAGAGCCCAGAGGAAATAACGAGATAAAATCCTTGGAATTCAAGTACTCGCACTTTTGGTTTCACTTCCACAACTTACCCCCTGTGTGTTTCAACAAGAAAAAC
GCCATGACGTTGGGAAATGCGATAGAAGTCTTCAAAAAGGTGGACCTGGATGAAGAGGAGAAAGGGTGGGGAGATACACTAAGAATAAAAACAAGAATAGACATAAATAA
GCCGAAAGAGAGGAACTAA
Protein sequenceShow/hide protein sequence
MEKGLQNMVVCKILTSKGIVPEVFMRLMPKIWGMEGKMKMKVGKNIYTCKFRSKREKNRVVEGRLWIYDKALLLFEEPRGNNEIKSLEFKYSHFWFHFHNLPPVCFNKKN
AMTLGNAIEVFKKVDLDEEEKGWGDTLRIKTRIDINKPKERN