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Lag0005252 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005252
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein/zf-CCHC_4 domain-containing protein
Genome locationchr6:12680459..12680854
RNA-Seq ExpressionLag0005252
SyntenyLag0005252
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A6J1DAR4 uncharacterized protein LOC1110189547.6e-0441.89Show/hide
Query:  EDVWVPITIEKLPDFCYRCGKIGNVVREYEEEDGEEDEDIEEYQYGPWMR-----RKLDFQDERKSQKGKRKNR
        +D+W P+  EKLPDFCY CG++G+  RE+E+   E   +    QYG W+R     + L  QDE   Q+G R +R
Subjt:  EDVWVPITIEKLPDFCYRCGKIGNVVREYEEEDGEEDEDIEEYQYGPWMR-----RKLDFQDERKSQKGKRKNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGACGTGTGGGTGCCAATCACAATAGAAAAATTACCAGACTTTTGCTATAGATGTGGGAAGATAGGCAATGTCGTAAGGGAATATGAAGAGGAGGATGGAGA
AGAAGATGAAGATATAGAAGAATATCAGTATGGTCCTTGGATGAGAAGAAAACTAGACTTCCAAGATGAAAGGAAAAGTCAGAAAGGAAAAAGGAAAAATAGGAAAAAGA
AGCAGATCAAAGAAGACACCAGCGAAGAGGAAAACGAAGAAACAAAATGCGAAAAGGAAGATGAGACATCAGAAGATCTAAGGCAGGAAAGAAACAATAGCCCACCAGAA
TCCAATCGGCGACGATTGGAGAAGGGGATCAACCTGACAACAAGAGAAGGGAATAAAATATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGACGTGTGGGTGCCAATCACAATAGAAAAATTACCAGACTTTTGCTATAGATGTGGGAAGATAGGCAATGTCGTAAGGGAATATGAAGAGGAGGATGGAGA
AGAAGATGAAGATATAGAAGAATATCAGTATGGTCCTTGGATGAGAAGAAAACTAGACTTCCAAGATGAAAGGAAAAGTCAGAAAGGAAAAAGGAAAAATAGGAAAAAGA
AGCAGATCAAAGAAGACACCAGCGAAGAGGAAAACGAAGAAACAAAATGCGAAAAGGAAGATGAGACATCAGAAGATCTAAGGCAGGAAAGAAACAATAGCCCACCAGAA
TCCAATCGGCGACGATTGGAGAAGGGGATCAACCTGACAACAAGAGAAGGGAATAAAATATTATAA
Protein sequenceShow/hide protein sequence
MAEDVWVPITIEKLPDFCYRCGKIGNVVREYEEEDGEEDEDIEEYQYGPWMRRKLDFQDERKSQKGKRKNRKKKQIKEDTSEEENEETKCEKEDETSEDLRQERNNSPPE
SNRRRLEKGINLTTREGNKIL