CuGenDBv2

Gene ID	Lag0005265
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Gag protease polyprotein
Genome location	chr6:13012278..13012616
RNA-Seq Expression	Lag0005265
Synteny	Lag0005265
Gene Ontology terms	GO:0090304 - nucleic acid metabolic process (biological process) GO:0003824 - catalytic activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031753.1 gag protease polyprotein [Cucumis melo var. makuwa]

2.3e-11

47.27

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Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]

2.3e-11

47.27

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Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]

2.3e-11

47.27

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Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

TYK06199.1 uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa]

2.3e-11

47.27

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Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]

2.3e-11

47.27

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Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SND9 Gag protease polyprotein

1.1e-11

47.27

Show/hide

Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

A0A5A7TZU9 Ribonuclease H

1.1e-11

47.27

Show/hide

Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

A0A5D3BIH8 Uncharacterized protein

1.1e-11

47.27

Show/hide

Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

A0A5D3C783 Ribonuclease H

1.1e-11

47.27

Show/hide

Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

A0A5D3D1E5 Ribonuclease H

1.1e-11

47.27

Show/hide

Query:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT
        I ++ +  ST + TR SAFQRLN    +  S   TP  TR S F+RLSV+  RD+K+ S S          V     +   D EIRSA PSRMKRK FV+
Subjt:  IGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVT

Query:  VDTDGSLKVK
        V+T+GSLKVK
Subjt:  VDTDGSLKVK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCCTATTGGGGAAGAAGAGAGTACATTTTCAACTCTGAATGTCACCCGACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGAGAAGAGGAGAGTACATTTTCAAC
TCCGGATGTGACTCGGCCATCAGTTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTCTGCTTCATCGATATCTCACCGACTTCAAAATGAAGATG
TGATGAAAAATGAAAAGATCACTAAGGCCGATGGAGAAATTCGTAGTGCAGTTCCTTCACGAATGAAAAGAAAATCCTTTGTTACTGTCGATACGGATGGTTCCTTGAAG
GTAAAGTGA

mRNA sequence

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Protein sequence

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MPIGEEESTFSTLNVTRPSAFQRLNMPIGEEESTFSTPDVTRPSVFQRLSVTTRRDKKEQSASSISHRLQNEDVMKNEKITKADGEIRSAVPSRMKRKSFVTVDTDGSLK
VK

Lag0005265 (gene) of Sponge gourd (AG-4) v1 genome