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Lag0005276 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005276
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr6:13242541..13242888
RNA-Seq ExpressionLag0005276
SyntenyLag0005276
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB93772.1 hypothetical protein L484_010911 [Morus notabilis]9.2e-0850.77Show/hide
Query:  PTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF
        P+S +  PT+ P L+IKL D N+LLWKNQ+LN IIA   + FI+G+ P PP+FL     +VNP +
Subjt:  PTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF

RVW56403.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]5.8e-1056.58Show/hide
Query:  NPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDVAQSQVNPQFL
        NP+  F P    + + YP+L+ PLTIKL ++N  LWKNQLLN IIA  +E FI G TP P KFLD AQ QVNP F+
Subjt:  NPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDVAQSQVNPQFL

RVX04814.1 hypothetical protein CK203_024917 [Vitis vinifera]1.6e-0745.98Show/hide
Query:  PTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGTPA-PPKFLDVAQSQVNPQFL
        PTP+     + N S    P       P P+L+ PL+IKL ++N LLW NQL+N IIA  +E FIN   + PPK+LD A+ QVNP+F+
Subjt:  PTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGTPA-PPKFLDVAQSQVNPQFL

TXG69550.1 hypothetical protein EZV62_004485 [Acer yangbiense]2.4e-0854.84Show/hide
Query:  PSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF
        P   P++T  L IKL D NY+LWKNQLLN IIA  +E FI GT P PPK L++ Q  +NP +
Subjt:  PSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]2.2e-0947.25Show/hide
Query:  QYPPAPTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF
        Q+PP PTP+   FL+  P+       P S +P+PTL  PL +KL D+N+LLWKNQLLN +IA  +  +++GT   PP+FLD  Q Q NP +
Subjt:  QYPPAPTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF

TrEMBL top hitse value%identityAlignment
A0A438F8X3 Retrovirus-related Pol polyprotein from transposon RE12.8e-1056.58Show/hide
Query:  NPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDVAQSQVNPQFL
        NP+  F P    + + YP+L+ PLTIKL ++N  LWKNQLLN IIA  +E FI G TP P KFLD AQ QVNP F+
Subjt:  NPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDVAQSQVNPQFL

A0A438J785 Uncharacterized protein7.6e-0845.98Show/hide
Query:  PTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGTPA-PPKFLDVAQSQVNPQFL
        PTP+     + N S    P       P P+L+ PL+IKL ++N LLW NQL+N IIA  +E FIN   + PPK+LD A+ QVNP+F+
Subjt:  PTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGTPA-PPKFLDVAQSQVNPQFL

A0A5C7IK20 Uncharacterized protein1.2e-0854.84Show/hide
Query:  PSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF
        P   P++T  L IKL D NY+LWKNQLLN IIA  +E FI GT P PPK L++ Q  +NP +
Subjt:  PSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF

A0A6J1DQX7 uncharacterized protein LOC1110223151.1e-0947.25Show/hide
Query:  QYPPAPTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF
        Q+PP PTP+   FL+  P+       P S +P+PTL  PL +KL D+N+LLWKNQLLN +IA  +  +++GT   PP+FLD  Q Q NP +
Subjt:  QYPPAPTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF

W9RJ64 Uncharacterized protein4.5e-0850.77Show/hide
Query:  PTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF
        P+S +  PT+ P L+IKL D N+LLWKNQ+LN IIA   + FI+G+ P PP+FL     +VNP +
Subjt:  PTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDVAQSQVNPQF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCACCCGAATATCAATGCCTCACCCTCTGGTTTTGCTCCCAATCCCTCCCCTGCTACAGGCTTTCAATATCCTCCAGCTCCAACGCCTTCTTTTCCCTTTTTTCT
TTCTTATAACCCGTCTGCCCCATTTATCCCAACTGCCCCTACTTCACCTTCCCCGTATCCCACCTTGACCCCTCCCCTTACTATCAAACTCACCGATTCTAACTATCTTC
TTTGGAAAAACCAACTTCTCAACCACATCATTGCATTTGATATGGAATCATTCATCAACGGTACACCAGCTCCACCGAAGTTCTTGGATGTTGCTCAATCTCAAGTAAAT
CCTCAGTTTCTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCACCCGAATATCAATGCCTCACCCTCTGGTTTTGCTCCCAATCCCTCCCCTGCTACAGGCTTTCAATATCCTCCAGCTCCAACGCCTTCTTTTCCCTTTTTTCT
TTCTTATAACCCGTCTGCCCCATTTATCCCAACTGCCCCTACTTCACCTTCCCCGTATCCCACCTTGACCCCTCCCCTTACTATCAAACTCACCGATTCTAACTATCTTC
TTTGGAAAAACCAACTTCTCAACCACATCATTGCATTTGATATGGAATCATTCATCAACGGTACACCAGCTCCACCGAAGTTCTTGGATGTTGCTCAATCTCAAGTAAAT
CCTCAGTTTCTTGTTTGA
Protein sequenceShow/hide protein sequence
MQHPNINASPSGFAPNPSPATGFQYPPAPTPSFPFFLSYNPSAPFIPTAPTSPSPYPTLTPPLTIKLTDSNYLLWKNQLLNHIIAFDMESFINGTPAPPKFLDVAQSQVN
PQFLV