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Lag0005279 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005279
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionFanconi-associated nuclease
Genome locationchr6:13301814..13302284
RNA-Seq ExpressionLag0005279
SyntenyLag0005279
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB63566.1 hypothetical protein L484_026904 [Morus notabilis]1.4e-0635.06Show/hide
Query:  LKRDFLFERGFSGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYN
        ++R F++ RG     P F+ + IA H W  FC  P +   Q+VR+FYAN +  +   + +RG  + ++  AIN+LY+
Subjt:  LKRDFLFERGFSGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYN

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]3.1e-0629Show/hide
Query:  FVNNSARAKHAELLKRDFLFERGF------SGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYNFKIS
        FV+ +A+  +  +  R   FE GF      + +L   +   +  H W+ F   P  VN+ +V+EFY+NI + +   V+VRG+ + ++P+AIN  +  +++
Subjt:  FVNNSARAKHAELLKRDFLFERGF------SGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYNFKIS

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]1.9e-0840.43Show/hide
Query:  NNSARAKHAE-LLKRDFLFERGFSGD------LPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALY
        + +A  ++ E +  R    E+GF GD       P F+   I  H W+LFCA PE + + +VREFYAN+   D   V VRGV+V  S  AIN +Y
Subjt:  NNSARAKHAE-LLKRDFLFERGFSGD------LPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALY

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.4e-0637.5Show/hide
Query:  EPQLSYDRFVNNSARAKHAELLKRDFLFERGF-------SGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAI
        E + +  R+ NN        +  R    E+GF        G LP F+   I  H W+ FCA PE     +VREFYAN+   +   V VRGV+V WS  AI
Subjt:  EPQLSYDRFVNNSARAKHAELLKRDFLFERGF-------SGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAI

Query:  NALY
        NA++
Subjt:  NALY

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]6.2e-0738.14Show/hide
Query:  RFVNNSARAKHAELLKRDFL-FERGFSGD------LPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALY
        +F + +A A++ E +K   L  E+GF+ +       P F+   I  H W+LFCA  E     +VREFYAN+   +   V V+GV+V WS  AIN L+
Subjt:  RFVNNSARAKHAELLKRDFL-FERGFSGD------LPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALY

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein9.3e-0940.43Show/hide
Query:  NNSARAKHAE-LLKRDFLFERGFSGD------LPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALY
        + +A  ++ E +  R    E+GF GD       P F+   I  H W+LFCA PE + + +VREFYAN+   D   V VRGV+V  S  AIN +Y
Subjt:  NNSARAKHAE-LLKRDFLFERGFSGD------LPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALY

A0A2P5BCG4 Uncharacterized protein (Fragment)1.1e-0637.5Show/hide
Query:  EPQLSYDRFVNNSARAKHAELLKRDFLFERGF-------SGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAI
        E + +  R+ NN        +  R    E+GF        G LP F+   I  H W+ FCA PE     +VREFYAN+   +   V VRGV+V WS  AI
Subjt:  EPQLSYDRFVNNSARAKHAELLKRDFLFERGF-------SGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAI

Query:  NALY
        NA++
Subjt:  NALY

A0A2P5EYL5 Uncharacterized protein3.0e-0738.14Show/hide
Query:  RFVNNSARAKHAELLKRDFL-FERGFSGD------LPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALY
        +F + +A A++ E +K   L  E+GF+ +       P F+   I  H W+LFCA  E     +VREFYAN+   +   V V+GV+V WS  AIN L+
Subjt:  RFVNNSARAKHAELLKRDFL-FERGFSGD------LPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALY

A0A6A2ZUE4 Uncharacterized protein1.5e-0629Show/hide
Query:  FVNNSARAKHAELLKRDFLFERGF------SGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYNFKIS
        FV+ +A+  +  +  R   FE GF      + +L   +   +  H W+ F   P  VN+ +V+EFY+NI + +   V+VRG+ + ++P+AIN  +  +++
Subjt:  FVNNSARAKHAELLKRDFLFERGF------SGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYNFKIS

W9R159 Uncharacterized protein6.7e-0735.06Show/hide
Query:  LKRDFLFERGFSGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYN
        ++R F++ RG     P F+ + IA H W  FC  P +   Q+VR+FYAN +  +   + +RG  + ++  AIN+LY+
Subjt:  LKRDFLFERGFSGDLPHFLRTGIADHAWELFCAKPESVNSQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGAAGGAAGAGCGAGAGAAGAAGAGGCCGAGGAAAAGTAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCAGAAAATGGAAA
AAGTGTTGCTGAAGCATCGGAGGAACCTGATGAGATAGAAGAGCCACAGTTGTCGTATGATCGCTTCGTCAACAATTCTGCCAGGGCAAAACATGCTGAGCTGCTGAAGA
GAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGCATTTTCTGAGGACCGGCATTGCAGACCACGCCTGGGAGTTGTTTTGTGCAAAACCTGAATCTGTGAAC
TCACAAGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAAGTCTACTGGAGTCCTAGTGCTATTAACGCACTGTA
TAACTTCAAAATTTCCCCACGCAGCGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGAAGGAAGAGCGAGAGAAGAAGAGGCCGAGGAAAAGTAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCAGAAAATGGAAA
AAGTGTTGCTGAAGCATCGGAGGAACCTGATGAGATAGAAGAGCCACAGTTGTCGTATGATCGCTTCGTCAACAATTCTGCCAGGGCAAAACATGCTGAGCTGCTGAAGA
GAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGCATTTTCTGAGGACCGGCATTGCAGACCACGCCTGGGAGTTGTTTTGTGCAAAACCTGAATCTGTGAAC
TCACAAGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAAGTCTACTGGAGTCCTAGTGCTATTAACGCACTGTA
TAACTTCAAAATTTCCCCACGCAGCGTATAA
Protein sequenceShow/hide protein sequence
MQRRKSERRRGRGKVREEAEKKAEEERLLKRRAENGKSVAEASEEPDEIEEPQLSYDRFVNNSARAKHAELLKRDFLFERGFSGDLPHFLRTGIADHAWELFCAKPESVN
SQVVREFYANIDKEDGFQVIVRGVEVYWSPSAINALYNFKISPRSV