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Lag0005285 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005285
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPlant protein 1589 of Uncharacterized protein function
Genome locationchr6:13524894..13525380
RNA-Seq ExpressionLag0005285
SyntenyLag0005285
Gene Ontology termsNA
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444348.1 PREDICTED: uncharacterized protein LOC103487701 [Cucumis melo]7.5e-3585.54Show/hide
Query:  YSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        Y  + HHFLPCFHC PHAYIRMVQHLIERCL+LHMSRDECVKALAHHANIRPL+TLTVWKELQKEN++FF AYF+TISP PFL
Subjt:  YSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

XP_023538194.1 uncharacterized protein LOC111799040 isoform X1 [Cucurbita pepo subsp. pepo]8.8e-3686.75Show/hide
Query:  HHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFLGNDPF
        HHFLPCFHCHPHAYIRM+QHLIERCL+LHMSRDECVKALA HANIRPL+TLTVWKELQKENTEFF AY  TI PKPFLG   F
Subjt:  HHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFLGNDPF

XP_023538195.1 uncharacterized protein LOC111799040 isoform X2 [Cucurbita pepo subsp. pepo]7.5e-3589.74Show/hide
Query:  HHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        HHFLPCFHCHPHAYIRM+QHLIERCL+LHMSRDECVKALA HANIRPL+TLTVWKELQKENTEFF AY  TI PKPFL
Subjt:  HHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

XP_038884418.1 uncharacterized protein LOC120075271 isoform X1 [Benincasa hispida]7.5e-3583.53Show/hide
Query:  YSYSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        Y   ++HH  +PCFHCHPHAYIRMVQHLIERCL+LHMSRDECVKALAHHANIRPL+TLTVWKELQKEN+EFF AYF+TISP PFL
Subjt:  YSYSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

XP_038884419.1 uncharacterized protein LOC120075271 isoform X2 [Benincasa hispida]7.5e-3583.53Show/hide
Query:  YSYSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        Y   ++HH  +PCFHCHPHAYIRMVQHLIERCL+LHMSRDECVKALAHHANIRPL+TLTVWKELQKEN+EFF AYF+TISP PFL
Subjt:  YSYSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

TrEMBL top hitse value%identityAlignment
A0A0A0LMP2 Uncharacterized protein5.2e-3484.34Show/hide
Query:  YSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        Y  + HHFLPCFHC PHAYIRMVQHLIERCL+LHMSRDECVKALA HANIRPL+TLTVWKELQKEN++FF AYF+TISP PFL
Subjt:  YSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

A0A1S3BA39 uncharacterized protein LOC1034877013.6e-3585.54Show/hide
Query:  YSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        Y  + HHFLPCFHC PHAYIRMVQHLIERCL+LHMSRDECVKALAHHANIRPL+TLTVWKELQKEN++FF AYF+TISP PFL
Subjt:  YSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

A0A6J1BRT4 uncharacterized protein LOC1110051253.6e-3585.54Show/hide
Query:  YSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        YSYSH  FLPCFHCHPHAYIRMVQHLIERCL+LHMS DEC KALAHHANIRPL+TLTVW+ELQKENTEFF +YF+ ISPKP L
Subjt:  YSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

A0A6J1GIJ5 uncharacterized protein LOC1114544741.0e-3488.46Show/hide
Query:  HHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        HHFLPCFHCHPHAYIRM+QHLIERCL+LHMSRDECVKAL  HANIRPL+TLTVWKELQKENTEFF AY  TI PKPFL
Subjt:  HHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

A0A6J1KA89 uncharacterized protein LOC111492501 isoform X11.2e-3382.95Show/hide
Query:  MYPYSYSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        MYPYS     H FLPCFHCHP AYIRMVQHLIERCL+LHMSRDECVKALAHHANIRPL+T TVWKELQKEN EFF AYF TIS  PFL
Subjt:  MYPYSYSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.1 Plant protein 1589 of unknown function9.7e-2551.92Show/hide
Query:  SHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLT------------------------VWKELQKENTEFFHAYFNTISP
        S H+ LPC HC PH+YIRMVQH+IERC++L M+RDECVKAL HHA+I PLVTLT                        VW+ LQ+EN +FF  Y + +SP
Subjt:  SHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLT------------------------VWKELQKENTEFFHAYFNTISP

Query:  KPFL
        +PFL
Subjt:  KPFL

AT1G10657.2 Plant protein 1589 of unknown function8.5e-2967.5Show/hide
Query:  SHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        S H+ LPC HC PH+YIRMVQH+IERC++L M+RDECVKAL HHA+I PLVTLTVW+ LQ+EN +FF  Y + +SP+PFL
Subjt:  SHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

AT1G10657.3 Plant protein 1589 of unknown function8.5e-2967.5Show/hide
Query:  SHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL
        S H+ LPC HC PH+YIRMVQH+IERC++L M+RDECVKAL HHA+I PLVTLTVW+ LQ+EN +FF  Y + +SP+PFL
Subjt:  SHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFL

AT1G10657.4 Plant protein 1589 of unknown function2.2e-2471.64Show/hide
Query:  SHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFF
        S H+ LPC HC PH+YIRMVQH+IERC++L M+RDECVKAL HHA+I PLVTLTVW+ LQ+EN +FF
Subjt:  SHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFF

AT3G55240.1 Plant protein 1589 of unknown function4.7e-1969.64Show/hide
Query:  AYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAY
        +YI MVQH+IE+CLI HMS++ECV+AL+ HANI P++T TVWKEL+KEN EFF AY
Subjt:  AYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCCTTACAGTTACAGTTACAGCCATCACCACTTTCTTCCTTGTTTTCATTGCCACCCCCATGCCTATATTCGGATGGTCCAACATCTCATAGAGAGATGCTTGAT
TCTTCATATGAGCCGTGATGAGTGCGTAAAGGCACTGGCTCACCATGCAAACATTCGCCCTCTCGTCACACTTACAGTGTGGAAAGAGCTCCAGAAAGAGAACACGGAAT
TCTTTCATGCTTATTTCAATACTATTTCTCCTAAGCCATTTCTGGGTAATGATCCTTTTGAATGGGAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACCCTTACAGTTACAGTTACAGCCATCACCACTTTCTTCCTTGTTTTCATTGCCACCCCCATGCCTATATTCGGATGGTCCAACATCTCATAGAGAGATGCTTGAT
TCTTCATATGAGCCGTGATGAGTGCGTAAAGGCACTGGCTCACCATGCAAACATTCGCCCTCTCGTCACACTTACAGTGTGGAAAGAGCTCCAGAAAGAGAACACGGAAT
TCTTTCATGCTTATTTCAATACTATTTCTCCTAAGCCATTTCTGGGTAATGATCCTTTTGAATGGGAAATTTGA
Protein sequenceShow/hide protein sequence
MYPYSYSYSHHHFLPCFHCHPHAYIRMVQHLIERCLILHMSRDECVKALAHHANIRPLVTLTVWKELQKENTEFFHAYFNTISPKPFLGNDPFEWEI