CuGenDBv2

Gene ID	Lag0005286
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Retrotran_gag_3 domain-containing protein
Genome location	chr6:13603895..13605336
RNA-Seq Expression	Lag0005286
Synteny	Lag0005286
Gene Ontology terms	NA
InterPro domains	IPR029472 - Retrotransposon Copia-like, N-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA8516701.1 hypothetical protein F0562_016793 [Nyssa sinensis]

2.0e-90

44.54

Show/hide

Query:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR
        MA+T  + +++ + + S     S +PIFLLSNICNL+  RLDS+NY+ W+FQ+ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+
Subjt:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR

Query:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN
        AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSALH + KG  +S+D Y+ +IK+  D L +VSV ++ E++L+Y LNGLP E+N
Subjt:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN

Query:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G
        +F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++ P     RG +  NF GRGR     GRG F N+    G  +SF   GR  
Subjt:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G

Query:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS
        SPN GQ    YP     QSNQ    S PV     N    S L            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN   
Subjt:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS

Query:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
         Y G+D IT+ANGQ L I+ +G   I     + RL+N+LCVP ++TNLLSV Q C DN+C FIFD++ F IQDK T Q L+QG S
Subjt:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

KAA8519786.1 hypothetical protein F0562_014124 [Nyssa sinensis]

9.0e-91

44.54

Show/hide

Query:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR
        MA+T  + +++ + + S     S +PIFLLSNICNL+  RLDS+NY+ W+FQ+ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+
Subjt:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR

Query:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN
        AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSALH + KG  +S+D Y+ +IK+  D L +VSV ++ E++L+Y LNGLP E+N
Subjt:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN

Query:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G
        +F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++ P     RG +  NF GRGR     GRG F N+    G  +SF   GR  
Subjt:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G

Query:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS
        SPN GQ    YP     QSNQ    S PV     N    S L            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN   
Subjt:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS

Query:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
         Y G+D IT+ANGQ L I+ +G   I     + RL+N+LCVP ++TNLLSV Q C DN+C FIFD++ F IQDK T Q L+QG S
Subjt:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

KAA8521875.1 hypothetical protein F0562_012811 [Nyssa sinensis]

1.6e-76

43.65

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Query:  FQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSAL
        +++ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSAL
Subjt:  FQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSAL

Query:  HTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSF
        H + KG  +S+D Y+ +IK+  D L +VSV ++ E++L+Y LNGLP E+N+F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++
Subjt:  HTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSF

Query:  NPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-GSPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL--------
         P     RG +  NF GRGR     GRG F N+    G  +SF   GR  SPN GQ    YP     QSNQ    S PV     N    S L        
Subjt:  NPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-GSPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL--------

Query:  --PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLS
            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN    Y G+D IT+ANGQ L I+ +G   I     +  L+N+LCVP ++TNLLS
Subjt:  --PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLS

Query:  VSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQG
        V Q C DN+C FIFD++ F IQDK T Q L+QG
Subjt:  VSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQG

KAA8524269.1 hypothetical protein F0562_010692 [Nyssa sinensis]

9.0e-91

44.54

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Query:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR
        MA+T  + +++ + + S     S +PIFLLSNICNL+  RLDS+NY+ W+FQ+ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+
Subjt:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR

Query:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN
        AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSALH + KG  +S+D Y+ +IK+  D L +VSV ++ E++L+Y LNGLP E+N
Subjt:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN

Query:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G
        +F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++ P     RG +  NF GRGR     GRG F N+    G  +SF   GR  
Subjt:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G

Query:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS
        SPN GQ    YP     QSNQ    S PV     N    S L            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN   
Subjt:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS

Query:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
         Y G+D IT+ANGQ L I+ +G   I     + RL+N+LCVP ++TNLLSV Q C DN+C FIFD++ F IQDK T Q L+QG S
Subjt:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

KAA8535282.1 hypothetical protein F0562_030285 [Nyssa sinensis]

1.5e-90

44.54

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Query:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR
        MA+T  + +++ + + S     S +PIFLLSNICNL+  RLDS+NY+ W+FQ+ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+
Subjt:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR

Query:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN
        AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSALH + KG  +S+D Y+ +IK   D L +VSV ++ E++L+Y LNGLP E+N
Subjt:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN

Query:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G
        +F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++ P     RG +  NF GRGR     GRG F N+    G  +SF   GR  
Subjt:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G

Query:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS
        SPN GQ    YP     QSNQ    S PV     N    S L            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN   
Subjt:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS

Query:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
         Y G+D IT+ANGQ L I+ +G   I     + RL+N+LCVP ++TNLLSV Q C DN+C FIFD++ F IQDK T Q L+QG S
Subjt:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

TrEMBL top hits

e value

%identity

Alignment

A0A5J4ZHB6 Uncharacterized protein

9.7e-91

44.54

Show/hide

Query:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR
        MA+T  + +++ + + S     S +PIFLLSNICNL+  RLDS+NY+ W+FQ+ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+
Subjt:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR

Query:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN
        AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSALH + KG  +S+D Y+ +IK+  D L +VSV ++ E++L+Y LNGLP E+N
Subjt:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN

Query:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G
        +F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++ P     RG +  NF GRGR     GRG F N+    G  +SF   GR  
Subjt:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G

Query:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS
        SPN GQ    YP     QSNQ    S PV     N    S L            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN   
Subjt:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS

Query:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
         Y G+D IT+ANGQ L I+ +G   I     + RL+N+LCVP ++TNLLSV Q C DN+C FIFD++ F IQDK T Q L+QG S
Subjt:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

A0A5J4ZPW7 Retrotran_gag_3 domain-containing protein

4.3e-91

44.54

Show/hide

Query:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR
        MA+T  + +++ + + S     S +PIFLLSNICNL+  RLDS+NY+ W+FQ+ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+
Subjt:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR

Query:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN
        AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSALH + KG  +S+D Y+ +IK+  D L +VSV ++ E++L+Y LNGLP E+N
Subjt:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN

Query:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G
        +F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++ P     RG +  NF GRGR     GRG F N+    G  +SF   GR  
Subjt:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G

Query:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS
        SPN GQ    YP     QSNQ    S PV     N    S L            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN   
Subjt:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS

Query:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
         Y G+D IT+ANGQ L I+ +G   I     + RL+N+LCVP ++TNLLSV Q C DN+C FIFD++ F IQDK T Q L+QG S
Subjt:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

A0A5J4ZT09 Flavin-containing monooxygenase

8.0e-77

43.65

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Query:  FQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSAL
        +++ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSAL
Subjt:  FQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSAL

Query:  HTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSF
        H + KG  +S+D Y+ +IK+  D L +VSV ++ E++L+Y LNGLP E+N+F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++
Subjt:  HTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSF

Query:  NPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-GSPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL--------
         P     RG +  NF GRGR     GRG F N+    G  +SF   GR  SPN GQ    YP     QSNQ    S PV     N    S L        
Subjt:  NPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-GSPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL--------

Query:  --PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLS
            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN    Y G+D IT+ANGQ L I+ +G   I     +  L+N+LCVP ++TNLLS
Subjt:  --PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLS

Query:  VSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQG
        V Q C DN+C FIFD++ F IQDK T Q L+QG
Subjt:  VSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQG

A0A5J5A1U7 Integrase catalytic domain-containing protein

4.3e-91

44.54

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Query:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR
        MA+T  + +++ + + S     S +PIFLLSNICNL+  RLDS+NY+ W+FQ+ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+
Subjt:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR

Query:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN
        AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSALH + KG  +S+D Y+ +IK+  D L +VSV ++ E++L+Y LNGLP E+N
Subjt:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN

Query:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G
        +F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++ P     RG +  NF GRGR     GRG F N+    G  +SF   GR  
Subjt:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G

Query:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS
        SPN GQ    YP     QSNQ    S PV     N    S L            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN   
Subjt:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS

Query:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
         Y G+D IT+ANGQ L I+ +G   I     + RL+N+LCVP ++TNLLSV Q C DN+C FIFD++ F IQDK T Q L+QG S
Subjt:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

A0A5J5B049 Retrotran_gag_3 domain-containing protein

7.4e-91

44.54

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Query:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR
        MA+T  + +++ + + S     S +PIFLLSNICNL+  RLDS+NY+ W+FQ+ S+LKAHSL   +DG+  CP K++ D      A++NP Y  W  QD+
Subjt:  MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDR

Query:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN
        AL+TL+NATLS+ A S VIG  +S+E W+ALE+RFS+ TRS+I +LKSALH + KG  +S+D Y+ +IK   D L +VSV ++ E++L+Y LNGLP E+N
Subjt:  ALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFN

Query:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G
        +F+TSIRT+ E +TL+E++A+LK E + IE  HK          +   ++ P     RG +  NF GRGR     GRG F N+    G  +SF   GR  
Subjt:  SFRTSIRTRGETVTLDELHALLKSEAKFIEQQHK-------AVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGR-G

Query:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS
        SPN GQ    YP     QSNQ    S PV     N    S L            K P  +  AM+  Y+T +  +   W  D+G   H+T D+ANLN   
Subjt:  SPNQGQ----YP-----QSNQ-GRGSSPV-----NSFIESVL----------PRKTPPSKPAAMALAYDTTNTTAT--WLVDSGCNTHVTPDVANLNLNS

Query:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
         Y G+D IT+ANGQ L I+ +G   I     + RL+N+LCVP ++TNLLSV Q C DN+C FIFD++ F IQDK T Q L+QG S
Subjt:  GYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

SwissProt top hits

e value

%identity

Alignment

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

7.3e-35

27.49

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Query:  AVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATLSKAA
        A     L  N    L  N+ N+   +L STNYL W  QV ++   + L   +DGS   PP  +   D  P   VNP Y +W  QD+ + + +   +S + 
Subjt:  AVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATLSKAA

Query:  FSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVT
           V    ++ ++W  L K +++ +  H+ +L++ L    KG T+++DDY+  +    D+L  +   +D +  +   L  LP E+      I  +    T
Subjt:  FSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVT

Query:  LDELHALLKSEAKFIEQQHKAVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGRGSPNQGQYP-----------QSN
        L E+H  L +        H++  +AV S     + A   +  N      +N G     + N+N    ++   Q      PN  Q             Q +
Subjt:  LDELHALLKSEAKFIEQQHKAVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGRGSPNQGQYP-----------QSN

Query:  QGRGSSPVNSFIESVLPRKTP----PSKPAAMALAYDTTNTTATWLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLR
          +  S +  F+ SV  ++ P    P +P A  LA  +  ++  WL+DSG   H+T D  NL+L+  Y G D + VA+G  +PI+  G   +S     L 
Subjt:  QGRGSSPVNSFIESVLPRKTP----PSKPAAMALAYDTTNTTATWLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLR

Query:  LSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS
        L N+L VP++  NL+SV + C  N     F    F ++D +TG  L QGK+
Subjt:  LSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKDTGQTLYQGKS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

6.6e-28

26.17

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Query:  RLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLT
        +L STNYL W  QV ++   + L   +DGS   PP  +     + +  VNP Y +W  QD+ + + I   +S +    V    ++ ++W  L K +++ +
Subjt:  RLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATLSKAAFSFVIGCKSSKEVWIALEKRFSSLT

Query:  RSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVTLDELH-ALLKSEAKFIEQQHKAVTV
          H+ +L+                ++ R     D+L  +   +D +  +   L  LP ++      I  +    +L E+H  L+  E+K +       + 
Subjt:  RSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVTLDELH-ALLKSEAKFIEQQHKAVTV

Query:  AVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGRGSPNQGQYPQSNQGR-------GSS-----PVNSFIESVLPRKT---
         V       +  R +N      R ++N+G  R   YN N  R   NS+QP   GS +  + P+   GR       G S      ++ F  +   +++   
Subjt:  AVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGRGSPNQGQYPQSNQGR-------GSS-----PVNSFIESVLPRKT---

Query:  -PPSKPAAMALAYDTTNTTATWLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVD
          P +P A  LA ++      WL+DSG   H+T D  NL+ +  Y G D + +A+G  +PIT  G   +     SL L+ +L VP++  NL+SV + C  
Subjt:  -PPSKPAAMALAYDTTNTTATWLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVD

Query:  NNCIFIFDADWFSIQDKDTGQTLYQGKS
        N     F    F ++D +TG  L QGK+
Subjt:  NNCIFIFDADWFSIQDKDTGQTLYQGKS

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCCTCAACAATGGCTTCTTCTTCTTCAAGTCTCTCTGAAGCAGTTTCTGGTGGCTCCCTTCAGTCGAACACGCCAATTTTTCTTTTATCAAACATATGTAATCTGGT
TCCAGTGCGTTTAGACTCCACGAATTACTTGTTTTGGCGATTCCAAGTTGAATCGATGCTCAAGGCTCATTCACTCTTCGATATAGTTGATGGCTCCAACAAGTGTCCTC
CTAAATATTTGAATGATGCAGACAGAAATCCTCTAGCTGAAGTGAATCCGGCTTACCTGCAATGGATTGCACAAGATCGTGCGCTGATTACTCTGATCAATGCCACGCTC
TCCAAGGCTGCATTCTCCTTCGTCATAGGCTGTAAGTCTTCTAAGGAAGTGTGGATTGCACTGGAAAAACGATTTTCTTCGCTCACTAGGTCTCACATTCACGAGCTAAA
ATCTGCTTTACATACTGTTGTGAAAGGTCCTACTGAATCTGTAGATGATTACCTAATTCGAATTAAAGAATTGGTTGATAAATTAGATACTGTCTCTGTCAAAGTCGACT
CCGAAAATTTGCTGCTTTACACACTTAATGGACTGCCTGGGGAGTTTAACTCCTTTCGAACCTCCATCCGTACTCGTGGAGAAACAGTCACACTTGATGAACTTCATGCC
CTATTGAAATCGGAGGCTAAATTCATTGAGCAACAACATAAGGCTGTCACAGTTGCTGTGCCGAGCTTCAATCCTACAACCATGTTTGCTCGCGGATCTAATCAGTTCAA
TTTTTGTGGGCGAGGCCGATCGAATCAAGGACAAGGCCGTGGTTCCTTTTACAATCAAAACCAGGGTCGTGGTAATCAGAATTCATTTCAGCCGCAGGGTCGTGGAAGTC
CTAATCAAGGGCAGTATCCACAATCTAACCAAGGTCGTGGTTCTTCTCCTGTCAATTCCTTTATTGAATCTGTCTTACCAAGGAAGACACCCCCTTCGAAACCTGCTGCT
ATGGCACTTGCTTACGACACTACCAATACAACTGCTACTTGGCTCGTCGATAGTGGGTGCAATACGCACGTTACTCCTGATGTTGCTAATTTGAACCTCAACTCAGGATA
TAATGGAGAAGATGCAATCACCGTGGCAAATGGACAGGGTCTTCCGATTACACAGGCTGGTTTTGGTATTATTTCGAATCCTCAGGGCTCTTTACGGCTGTCAAACCTTC
TATGTGTTCCTGACTTATCAACAAACCTTCTATCTGTCTCTCAGTGTTGTGTTGATAACAATTGCATATTTATTTTCGACGCTGATTGGTTTTCTATTCAGGACAAGGAC
ACGGGGCAAACGTTGTACCAGGGCAAGAGTATGTAG

mRNA sequence

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Protein sequence

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MASTMASSSSSLSEAVSGGSLQSNTPIFLLSNICNLVPVRLDSTNYLFWRFQVESMLKAHSLFDIVDGSNKCPPKYLNDADRNPLAEVNPAYLQWIAQDRALITLINATL
SKAAFSFVIGCKSSKEVWIALEKRFSSLTRSHIHELKSALHTVVKGPTESVDDYLIRIKELVDKLDTVSVKVDSENLLLYTLNGLPGEFNSFRTSIRTRGETVTLDELHA
LLKSEAKFIEQQHKAVTVAVPSFNPTTMFARGSNQFNFCGRGRSNQGQGRGSFYNQNQGRGNQNSFQPQGRGSPNQGQYPQSNQGRGSSPVNSFIESVLPRKTPPSKPAA
MALAYDTTNTTATWLVDSGCNTHVTPDVANLNLNSGYNGEDAITVANGQGLPITQAGFGIISNPQGSLRLSNLLCVPDLSTNLLSVSQCCVDNNCIFIFDADWFSIQDKD
TGQTLYQGKSM

Lag0005286 (gene) of Sponge gourd (AG-4) v1 genome